RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 RNF183Q96D59 192 aa7.45□□□□□ -1.22
TRAF1-202ENST00000540010 UBL5Q9BZL1 73 aa7.45□□□□□ -1.22
TRAF1-202ENST00000540010 U3KQK5 164 aa7.45□□□□□ -1.22
TRAF1-202ENST00000540010 LGALS9O00182 355 aa7.45□□□□□ -1.22
TRAF1-202ENST00000540010 PRR9Q5T870 116 aa7.45□□□□□ -1.22
TRAF1-202ENST00000540010 GPHB5Q86YW7 130 aa7.45□□□□□ -1.22
TRAF1-202ENST00000540010 SVEP1Q4LDE5 3571 aa7.45□□□□□ -1.22
TRAF1-202ENST00000540010 CELSR2Q9HCU4 2923 aa7.45□□□□□ -1.22
TRAF1-202ENST00000540010 CHD6Q8TD26 2715 aa7.44□□□□□ -1.22
TRAF1-202ENST00000540010 K7EMT4 169 aa7.44□□□□□ -1.22
TRAF1-202ENST00000540010 DAD1P61803 113 aa7.44□□□□□ -1.22
TRAF1-202ENST00000540010 CSMD1Q96PZ7 3565 aa7.44□□□□□ -1.22
TRAF1-202ENST00000540010 TRAV4A0A0B4J268 109 aa7.44□□□□□ -1.22
TRAF1-202ENST00000540010 IGHV1-58A0A0C4DH39 117 aa7.44□□□□□ -1.22
TRAF1-202ENST00000540010 TRBV10-2A0A0K0K1G8 114 aa7.44□□□□□ -1.22
TRAF1-202ENST00000540010 CCL24O00175 119 aa7.44□□□□□ -1.22
TRAF1-202ENST00000540010 PSMB8P28062 276 aa7.44□□□□□ -1.22
TRAF1-202ENST00000540010 VSIG2Q96IQ7 327 aa7.44□□□□□ -1.22
TRAF1-202ENST00000540010 A0A0J9YXY3 114 aa7.44□□□□□ -1.22
TRAF1-202ENST00000540010 NRACQ8N912 160 aa7.44□□□□□ -1.22
TRAF1-202ENST00000540010 A8MZ25 164 aa7.43□□□□□ -1.22
TRAF1-202ENST00000540010 MED14OSP0DP75 135 aa7.43□□□□□ -1.22
TRAF1-202ENST00000540010 TRBV7-3A0A075B6L6 115 aa7.43□□□□□ -1.22
TRAF1-202ENST00000540010 HIST2H2BDQ6DRA6 164 aa7.43□□□□□ -1.22
TRAF1-202ENST00000540010 Q9HAA7 133 aa7.43□□□□□ -1.22
TRAF1-202ENST00000540010 CDKN2A-AS1Q9UH64 79 aa7.43□□□□□ -1.22
TRAF1-202ENST00000540010 PRM2P04554 102 aa7.43□□□□□ -1.22
TRAF1-202ENST00000540010 PROK1P58294 105 aa7.43□□□□□ -1.22
TRAF1-202ENST00000540010 HHLA3Q9XRX5 114 aa7.43□□□□□ -1.22
TRAF1-202ENST00000540010 ZNF561-AS1K7EIQ3 104 aa7.43□□□□□ -1.22
TRAF1-202ENST00000540010 BRI3O95415 125 aa7.43□□□□□ -1.22
TRAF1-202ENST00000540010 TRAV25A0A0B4J276 109 aa7.42□□□□□ -1.22
TRAF1-202ENST00000540010 ZNF702PQ9H963 129 aa7.42□□□□□ -1.22
TRAF1-202ENST00000540010 CELSR1Q9NYQ6 3014 aa7.42□□□□□ -1.22
TRAF1-202ENST00000540010 NFE4Q86UQ8 179 aa7.42□□□□□ -1.22
TRAF1-202ENST00000540010 TMEM89A2RUT3 159 aa7.42□□□□□ -1.22
TRAF1-202ENST00000540010 ZNF22P17026 224 aaPredicted RBP7.42□□□□□ -1.22
TRAF1-202ENST00000540010 MIR7-3HGQ8N6C7 128 aa7.42□□□□□ -1.22
TRAF1-202ENST00000540010 CITED1Q99966 193 aa7.42□□□□□ -1.22
TRAF1-202ENST00000540010 IGHV4-4A0A075B6R2 117 aa7.41□□□□□ -1.22
TRAF1-202ENST00000540010 LECT2O14960 151 aa7.41□□□□□ -1.22
TRAF1-202ENST00000540010 PSMG3-AS1Q96PY0 264 aa7.41□□□□□ -1.22
TRAF1-202ENST00000540010 A0A096LNJ9 63 aa7.41□□□□□ -1.22
TRAF1-202ENST00000540010 TMEM126AQ9H061 195 aa7.41□□□□□ -1.22
TRAF1-202ENST00000540010 RNASE3P12724 160 aaKnown RBP7.41□□□□□ -1.22
TRAF1-202ENST00000540010 FBN2P35556 2912 aa7.41□□□□□ -1.22
TRAF1-202ENST00000540010 ZANQ9Y493 2812 aa7.41□□□□□ -1.22
TRAF1-202ENST00000540010 FSHBP01225 129 aa7.4□□□□□ -1.22
TRAF1-202ENST00000540010 TRACP01848 142 aa7.4□□□□□ -1.22
TRAF1-202ENST00000540010 EDN2P20800 178 aa7.4□□□□□ -1.22
TRAF1-202ENST00000540010 HERV-K104P63124 156 aa7.4□□□□□ -1.22
TRAF1-202ENST00000540010 ATP6V0E2Q8NHE4 81 aa7.4□□□□□ -1.22
TRAF1-202ENST00000540010 IGLV4-3A0A075B6K6 122 aa7.4□□□□□ -1.22
TRAF1-202ENST00000540010 K7EQD1 137 aa7.4□□□□□ -1.22
TRAF1-202ENST00000540010 ATP5G1P05496 136 aa7.4□□□□□ -1.22
TRAF1-202ENST00000540010 GYPEP15421 78 aa7.4□□□□□ -1.22
TRAF1-202ENST00000540010 H3BT86 120 aa7.4□□□□□ -1.23
TRAF1-202ENST00000540010 ZNF580Q9UK33 172 aa7.39□□□□□ -1.23
TRAF1-202ENST00000540010 M0QY20 66 aa7.39□□□□□ -1.23
TRAF1-202ENST00000540010 ORMDL1Q9P0S3 153 aa7.39□□□□□ -1.23
TRAF1-202ENST00000540010 A0A1B0GX51 115 aa7.39□□□□□ -1.23
TRAF1-202ENST00000540010 DEFB4AO15263 64 aa7.39□□□□□ -1.23
TRAF1-202ENST00000540010 IGHV3-33P01772 117 aa7.39□□□□□ -1.23
TRAF1-202ENST00000540010 DSCR8Q96T75 97 aa7.39□□□□□ -1.23
TRAF1-202ENST00000540010 FLNBO75369 2602 aaKnown RBP7.39□□□□□ -1.23
TRAF1-202ENST00000540010 COX7B2Q8TF08 81 aa7.38□□□□□ -1.23
TRAF1-202ENST00000540010 LINC00467Q9BRT7 94 aa7.38□□□□□ -1.23
TRAF1-202ENST00000540010 DNAJC9-AS1A6NH13 148 aa7.38□□□□□ -1.23
TRAF1-202ENST00000540010 K7EQG2 157 aa7.38□□□□□ -1.23
TRAF1-202ENST00000540010 TRIAP1O43715 76 aa7.38□□□□□ -1.23
TRAF1-202ENST00000540010 DAZ2Q13117 558 aaKnown RBP7.38□□□□□ -1.23
TRAF1-202ENST00000540010 DAZ4Q86SG3 579 aaKnown RBP7.38□□□□□ -1.23
TRAF1-202ENST00000540010 KRTAP1-3Q8IUG1 177 aa7.38□□□□□ -1.23
TRAF1-202ENST00000540010 DAZ3Q9NR90 486 aaKnown RBP7.38□□□□□ -1.23
TRAF1-202ENST00000540010 ACYP1P07311 99 aa7.38□□□□□ -1.23
TRAF1-202ENST00000540010 MIAQ16674 131 aa7.38□□□□□ -1.23
TRAF1-202ENST00000540010 Q6ZTI0 123 aa7.38□□□□□ -1.23
TRAF1-202ENST00000540010 MRPL23Q16540 153 aaKnown RBP7.38□□□□□ -1.23
TRAF1-202ENST00000540010 UFSP1Q6NVU6 142 aa7.38□□□□□ -1.23
TRAF1-202ENST00000540010 HELZ2Q9BYK8 2649 aaKnown RBP7.38□□□□□ -1.23
TRAF1-202ENST00000540010 TEX15Q9BXT5 2789 aa7.38□□□□□ -1.23
TRAF1-202ENST00000540010 A0A0B4J2C4 111 aa7.37□□□□□ -1.23
TRAF1-202ENST00000540010 TMEM223A0PJW6 202 aa7.37□□□□□ -1.23
TRAF1-202ENST00000540010 PIK3CD-AS1Q5SR53 167 aa7.37□□□□□ -1.23
TRAF1-202ENST00000540010 COX8CQ7Z4L0 72 aa7.37□□□□□ -1.23
TRAF1-202ENST00000540010 XGP55808 180 aa7.36□□□□□ -1.23
TRAF1-202ENST00000540010 NDUFV3P56181 108 aaKnown RBP7.36□□□□□ -1.23
TRAF1-202ENST00000540010 DEFB121Q5J5C9 76 aa7.36□□□□□ -1.23
TRAF1-202ENST00000540010 CFAP126Q5VTH2 177 aa7.36□□□□□ -1.23
TRAF1-202ENST00000540010 C18orf65Q6ZTR6 163 aa7.36□□□□□ -1.23
TRAF1-202ENST00000540010 CR1P17927 2039 aa7.36□□□□□ -1.23
TRAF1-202ENST00000540010 FLNAP21333 2647 aaKnown RBP7.36□□□□□ -1.23
TRAF1-202ENST00000540010 APCP25054 2843 aa7.36□□□□□ -1.23
TRAF1-202ENST00000540010 TRBV27A0A0K0K1C4 114 aa7.36□□□□□ -1.23
TRAF1-202ENST00000540010 H0YGX0 51 aa7.36□□□□□ -1.23
TRAF1-202ENST00000540010 CNFNQ9BYD5 112 aa7.36□□□□□ -1.23
TRAF1-202ENST00000540010 C14orf132Q9NPU4 83 aa7.36□□□□□ -1.23
TRAF1-202ENST00000540010 IGHV3-30P01768 117 aa7.36□□□□□ -1.23
TRAF1-202ENST00000540010 IGHV3-30-5P0DP03 117 aa7.36□□□□□ -1.23
TRAF1-202ENST00000540010 POLR2KP53803 58 aaKnown RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms