RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 SHISA2Q6UWI4 295 aa10.46□□□□□ -0.73
ATL3-203ENST00000538786 SBSPONQ8IVN8 264 aa10.46□□□□□ -0.73
ATL3-203ENST00000538786 CSDC2Q9Y534 153 aaKnown RBP10.46□□□□□ -0.73
ATL3-203ENST00000538786 NOTCH3Q9UM47 2321 aa10.46□□□□□ -0.73
ATL3-203ENST00000538786 TINCRA0A1B0GVN0 87 aa10.46□□□□□ -0.74
ATL3-203ENST00000538786 SMAGPQ0VAQ4 97 aa10.46□□□□□ -0.74
ATL3-203ENST00000538786 Q6ZVH6 145 aa10.46□□□□□ -0.74
ATL3-203ENST00000538786 LINC00694P0DN24 101 aa10.45□□□□□ -0.74
ATL3-203ENST00000538786 GCSHP23434 173 aa10.45□□□□□ -0.74
ATL3-203ENST00000538786 FAM222AQ5U5X8 452 aa10.45□□□□□ -0.74
ATL3-203ENST00000538786 TM2D2Q9BX73 214 aa10.45□□□□□ -0.74
ATL3-203ENST00000538786 LEPROTO15243 131 aa10.45□□□□□ -0.74
ATL3-203ENST00000538786 TMEM243Q9BU79 118 aa10.45□□□□□ -0.74
ATL3-203ENST00000538786 J3QQQ9 107 aa10.44□□□□□ -0.74
ATL3-203ENST00000538786 MIFP14174 115 aa10.44□□□□□ -0.74
ATL3-203ENST00000538786 TSPEAR-AS2P59090 65 aa10.44□□□□□ -0.74
ATL3-203ENST00000538786 OXLD1Q5BKU9 147 aa10.44□□□□□ -0.74
ATL3-203ENST00000538786 CEND1Q8N111 149 aa10.44□□□□□ -0.74
ATL3-203ENST00000538786 IGHV4-28A0A0C4DH34 117 aa10.43□□□□□ -0.74
ATL3-203ENST00000538786 UBE2D1P51668 147 aa10.43□□□□□ -0.74
ATL3-203ENST00000538786 SCGB1D4Q6XE38 83 aa10.43□□□□□ -0.74
ATL3-203ENST00000538786 HIST1H4GQ99525 98 aa10.43□□□□□ -0.74
ATL3-203ENST00000538786 H7C423 109 aa10.43□□□□□ -0.74
ATL3-203ENST00000538786 LGALS3P17931 250 aaKnown RBP10.43□□□□□ -0.74
ATL3-203ENST00000538786 FXYD2P54710 66 aa10.43□□□□□ -0.74
ATL3-203ENST00000538786 PRIMA1Q86XR5 153 aa10.43□□□□□ -0.74
ATL3-203ENST00000538786 RNF183Q96D59 192 aa10.43□□□□□ -0.74
ATL3-203ENST00000538786 UBE2L6O14933 153 aa10.42□□□□□ -0.74
ATL3-203ENST00000538786 Q8NAQ8 132 aa10.42□□□□□ -0.74
ATL3-203ENST00000538786 PLEKHB2Q96CS7 222 aa10.42□□□□□ -0.74
ATL3-203ENST00000538786 H3BRM9 83 aa10.41□□□□□ -0.74
ATL3-203ENST00000538786 EGFEM1PQ0D2K5 195 aa10.41□□□□□ -0.74
ATL3-203ENST00000538786 AMMECR1LQ6DCA0 310 aa10.41□□□□□ -0.74
ATL3-203ENST00000538786 OR5A1Q8NGJ0 315 aa10.41□□□□□ -0.74
ATL3-203ENST00000538786 PRO0255Q9UI72 69 aa10.41□□□□□ -0.74
ATL3-203ENST00000538786 TRBV6-8A0A0A6YYG3 113 aa10.41□□□□□ -0.74
ATL3-203ENST00000538786 DEFB4AO15263 64 aa10.41□□□□□ -0.74
ATL3-203ENST00000538786 PTTG1IPP53801 180 aa10.41□□□□□ -0.74
ATL3-203ENST00000538786 TIRAPP58753 221 aa10.41□□□□□ -0.74
ATL3-203ENST00000538786 KRTAP10-11P60412 298 aa10.41□□□□□ -0.74
ATL3-203ENST00000538786 GEMIN7Q9H840 131 aaKnown RBP10.41□□□□□ -0.74
ATL3-203ENST00000538786 CDC42SE2Q9NRR3 84 aa10.41□□□□□ -0.74
ATL3-203ENST00000538786 TMEM101Q96IK0 257 aa10.4□□□□□ -0.74
ATL3-203ENST00000538786 IGHV3-64A0A075B6Q5 118 aa10.39□□□□□ -0.75
ATL3-203ENST00000538786 A0A0J9YY99 117 aa10.39□□□□□ -0.75
ATL3-203ENST00000538786 K7EP13 123 aa10.39□□□□□ -0.75
ATL3-203ENST00000538786 FAM19A3Q7Z5A8 133 aa10.39□□□□□ -0.75
ATL3-203ENST00000538786 IGLV5-45A0A087WSX0 123 aa10.39□□□□□ -0.75
ATL3-203ENST00000538786 IGHV1-58A0A0C4DH39 117 aa10.39□□□□□ -0.75
ATL3-203ENST00000538786 SMIM13P0DJ93 91 aa10.39□□□□□ -0.75
ATL3-203ENST00000538786 IGHV3-30-3P0DP02 117 aa10.39□□□□□ -0.75
ATL3-203ENST00000538786 GYPEP15421 78 aa10.39□□□□□ -0.75
ATL3-203ENST00000538786 DAD1P61803 113 aa10.39□□□□□ -0.75
ATL3-203ENST00000538786 A8MZ25 164 aa10.38□□□□□ -0.75
ATL3-203ENST00000538786 HERVK_113P63121 156 aa10.38□□□□□ -0.75
ATL3-203ENST00000538786 ATP6V0E2Q8NHE4 81 aa10.38□□□□□ -0.75
ATL3-203ENST00000538786 C9orf118A6NHY6 69 aa10.37□□□□□ -0.75
ATL3-203ENST00000538786 SPART-AS1P0CW21 52 aa10.37□□□□□ -0.75
ATL3-203ENST00000538786 LINC00242Q5T6M2 205 aa10.37□□□□□ -0.75
ATL3-203ENST00000538786 TRAV8-3A0A0A6YYJ7 113 aa10.37□□□□□ -0.75
ATL3-203ENST00000538786 PAX4O43316 350 aa10.37□□□□□ -0.75
ATL3-203ENST00000538786 SRSF9Q13242 221 aaKnown RBP eCLIP10.37□□□□□ -0.75
ATL3-203ENST00000538786 VSIG2Q96IQ7 327 aa10.37□□□□□ -0.75
ATL3-203ENST00000538786 SPANXB1Q9NS25 103 aaPredicted RBP10.37□□□□□ -0.75
ATL3-203ENST00000538786 NHP2Q9NX24 153 aaKnown RBP10.37□□□□□ -0.75
ATL3-203ENST00000538786 CDKN2A-AS1Q9UH64 79 aa10.37□□□□□ -0.75
ATL3-203ENST00000538786 VAMP3Q15836 100 aa10.36□□□□□ -0.75
ATL3-203ENST00000538786 CHCHD5Q9BSY4 110 aa10.36□□□□□ -0.75
ATL3-203ENST00000538786 CELA1Q9UNI1 258 aa10.36□□□□□ -0.75
ATL3-203ENST00000538786 TRAV13-1A0A0B4J241 112 aa10.35□□□□□ -0.75
ATL3-203ENST00000538786 ATP5G1P05496 136 aa10.35□□□□□ -0.75
ATL3-203ENST00000538786 SPINK8P0C7L1 97 aa10.35□□□□□ -0.75
ATL3-203ENST00000538786 GAGE6Q13070 117 aa10.35□□□□□ -0.75
ATL3-203ENST00000538786 UBE2V1Q13404 147 aa10.35□□□□□ -0.75
ATL3-203ENST00000538786 RAB37Q96AX2 223 aa10.35□□□□□ -0.75
ATL3-203ENST00000538786 COX6A2Q02221 97 aa10.35□□□□□ -0.75
ATL3-203ENST00000538786 FBN1P35555 2871 aaKnown RBP10.34□□□□□ -0.75
ATL3-203ENST00000538786 A0A1B0GWB2 263 aa10.33□□□□□ -0.76
ATL3-203ENST00000538786 K7ERJ3 54 aa10.33□□□□□ -0.76
ATL3-203ENST00000538786 C10orf126Q8N4M7 172 aa10.33□□□□□ -0.76
ATL3-203ENST00000538786 TEX48A0A1B0GUV7 120 aa10.33□□□□□ -0.76
ATL3-203ENST00000538786 A6NJY4 79 aa10.33□□□□□ -0.76
ATL3-203ENST00000538786 H3BUT2 72 aa10.33□□□□□ -0.76
ATL3-203ENST00000538786 C12orf74Q32Q52 190 aa10.33□□□□□ -0.76
ATL3-203ENST00000538786 TRRAPQ9Y4A5 3859 aa10.33□□□□□ -0.76
ATL3-203ENST00000538786 STAB1Q9NY15 2570 aa10.32□□□□□ -0.76
ATL3-203ENST00000538786 NDUFA12Q9UI09 145 aa10.32□□□□□ -0.76
ATL3-203ENST00000538786 IGLV4-60A0A075B6I1 120 aa10.31□□□□□ -0.76
ATL3-203ENST00000538786 IGLV5-39A0A0G2JS06 123 aa10.31□□□□□ -0.76
ATL3-203ENST00000538786 A0A0J9YXY3 114 aa10.31□□□□□ -0.76
ATL3-203ENST00000538786 CCL25O15444 150 aa10.31□□□□□ -0.76
ATL3-203ENST00000538786 IGHV3-30P01768 117 aa10.31□□□□□ -0.76
ATL3-203ENST00000538786 IGHV3-30-5P0DP03 117 aa10.31□□□□□ -0.76
ATL3-203ENST00000538786 ZFAND6Q6FIF0 208 aa10.31□□□□□ -0.76
ATL3-203ENST00000538786 COL6A5A8TX70 2615 aa10.3□□□□□ -0.76
ATL3-203ENST00000538786 NBEAL2Q6ZNJ1 2754 aa10.3□□□□□ -0.76
ATL3-203ENST00000538786 TRAV26-1A0A087WT03 109 aa10.3□□□□□ -0.76
ATL3-203ENST00000538786 TMEM238C9JI98 176 aa10.3□□□□□ -0.76
ATL3-203ENST00000538786 F5H768 121 aa10.3□□□□□ -0.76
ATL3-203ENST00000538786 G3V4G9 280 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms