RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 PF4P02776 101 aa6.61□□□□□ -1.35
UBE3B-207ENST00000537063 INSL3P51460 131 aa6.61□□□□□ -1.35
UBE3B-207ENST00000537063 VSIG2Q96IQ7 327 aa6.61□□□□□ -1.35
UBE3B-207ENST00000537063 INAFM1C9JVW0 142 aa6.61□□□□□ -1.35
UBE3B-207ENST00000537063 A0A0J9YXY3 114 aa6.6□□□□□ -1.35
UBE3B-207ENST00000537063 HIVEP2P31629 2446 aa6.6□□□□□ -1.35
UBE3B-207ENST00000537063 H7C423 109 aa6.59□□□□□ -1.35
UBE3B-207ENST00000537063 TSPAN13O95857 204 aa6.59□□□□□ -1.35
UBE3B-207ENST00000537063 CFC1BP0CG36 223 aa6.59□□□□□ -1.35
UBE3B-207ENST00000537063 CFC1P0CG37 223 aa6.59□□□□□ -1.35
UBE3B-207ENST00000537063 FOSL1P15407 271 aa6.59□□□□□ -1.35
UBE3B-207ENST00000537063 KIR2DL5BQ8NHK3 375 aa6.59□□□□□ -1.35
UBE3B-207ENST00000537063 IGHV3-64A0A075B6Q5 118 aa6.59□□□□□ -1.35
UBE3B-207ENST00000537063 TRAV8-3A0A0A6YYJ7 113 aa6.59□□□□□ -1.35
UBE3B-207ENST00000537063 TMEM238C9JI98 176 aa6.59□□□□□ -1.35
UBE3B-207ENST00000537063 GAGE7O76087 117 aa6.59□□□□□ -1.35
UBE3B-207ENST00000537063 GAGE12FP0CL80 117 aa6.59□□□□□ -1.35
UBE3B-207ENST00000537063 GAGE12GP0CL81 117 aa6.59□□□□□ -1.35
UBE3B-207ENST00000537063 GAGE12IP0CL82 117 aa6.59□□□□□ -1.35
UBE3B-207ENST00000537063 ZFAND6Q6FIF0 208 aa6.59□□□□□ -1.35
UBE3B-207ENST00000537063 PGPEP1Q9NXJ5 209 aa6.59□□□□□ -1.35
UBE3B-207ENST00000537063 IGLV5-39A0A0G2JS06 123 aa6.58□□□□□ -1.36
UBE3B-207ENST00000537063 EIF4EBP3O60516 100 aaPredicted RBP6.58□□□□□ -1.36
UBE3B-207ENST00000537063 FHL2Q14192 279 aa6.58□□□□□ -1.36
UBE3B-207ENST00000537063 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.58□□□□□ -1.36
UBE3B-207ENST00000537063 NSD1Q96L73 2696 aaPredicted RBP6.58□□□□□ -1.36
UBE3B-207ENST00000537063 GAGE12JA6NER3 117 aa6.58□□□□□ -1.36
UBE3B-207ENST00000537063 SMAGPQ0VAQ4 97 aa6.58□□□□□ -1.36
UBE3B-207ENST00000537063 GAGE4Q13068 117 aa6.58□□□□□ -1.36
UBE3B-207ENST00000537063 GAGE5Q13069 117 aa6.58□□□□□ -1.36
UBE3B-207ENST00000537063 GAGE13Q4V321 117 aa6.58□□□□□ -1.36
UBE3B-207ENST00000537063 LINC00242Q5T6M2 205 aa6.58□□□□□ -1.36
UBE3B-207ENST00000537063 C9orf66Q5T8R8 295 aa6.58□□□□□ -1.36
UBE3B-207ENST00000537063 SPANXDQ9BXN6 97 aa6.58□□□□□ -1.36
UBE3B-207ENST00000537063 SPANXCQ9NY87 97 aa6.58□□□□□ -1.36
UBE3B-207ENST00000537063 TRGV2A0A075B6R0 118 aa6.58□□□□□ -1.36
UBE3B-207ENST00000537063 SPATA3Q8NHX4 192 aa6.58□□□□□ -1.36
UBE3B-207ENST00000537063 CDC42SE2Q9NRR3 84 aa6.58□□□□□ -1.36
UBE3B-207ENST00000537063 HERVK_113P63121 156 aa6.57□□□□□ -1.36
UBE3B-207ENST00000537063 CITED1Q99966 193 aa6.57□□□□□ -1.36
UBE3B-207ENST00000537063 CDKN2A-AS1Q9UH64 79 aa6.57□□□□□ -1.36
UBE3B-207ENST00000537063 PRO0461Q9UI25 63 aa6.57□□□□□ -1.36
UBE3B-207ENST00000537063 X6R8D5 127 aa6.57□□□□□ -1.36
UBE3B-207ENST00000537063 A0A0B4J2C4 111 aa6.57□□□□□ -1.36
UBE3B-207ENST00000537063 TIMM17BO60830 172 aa6.57□□□□□ -1.36
UBE3B-207ENST00000537063 SPINK8P0C7L1 97 aa6.57□□□□□ -1.36
UBE3B-207ENST00000537063 NDUFA12Q9UI09 145 aa6.57□□□□□ -1.36
UBE3B-207ENST00000537063 SMIM9A6NGZ8 99 aa6.57□□□□□ -1.36
UBE3B-207ENST00000537063 F8W1H4 67 aa6.57□□□□□ -1.36
UBE3B-207ENST00000537063 COX6A2Q02221 97 aa6.57□□□□□ -1.36
UBE3B-207ENST00000537063 GEMIN7Q9H840 131 aaKnown RBP6.57□□□□□ -1.36
UBE3B-207ENST00000537063 SETD2Q9BYW2 2564 aaPredicted RBP6.57□□□□□ -1.36
UBE3B-207ENST00000537063 JMJD1CQ15652 2540 aa6.56□□□□□ -1.36
UBE3B-207ENST00000537063 LOC100131303A0A0U1RQF7 123 aa6.56□□□□□ -1.36
UBE3B-207ENST00000537063 NDUFA1O15239 70 aa6.56□□□□□ -1.36
UBE3B-207ENST00000537063 CRLF1O75462 422 aa6.56□□□□□ -1.36
UBE3B-207ENST00000537063 TMEM243Q9BU79 118 aa6.56□□□□□ -1.36
UBE3B-207ENST00000537063 HECTD1Q9ULT8 2610 aa6.56□□□□□ -1.36
UBE3B-207ENST00000537063 RPL24P83731 157 aaKnown RBP6.56□□□□□ -1.36
UBE3B-207ENST00000537063 DGAT2L7PQ6IED9 249 aa6.56□□□□□ -1.36
UBE3B-207ENST00000537063 RNF183Q96D59 192 aa6.56□□□□□ -1.36
UBE3B-207ENST00000537063 TMEM101Q96IK0 257 aa6.56□□□□□ -1.36
UBE3B-207ENST00000537063 A4D1N5 150 aa6.56□□□□□ -1.36
UBE3B-207ENST00000537063 K7ERU9 68 aa6.56□□□□□ -1.36
UBE3B-207ENST00000537063 MUSTN1Q8IVN3 82 aa6.56□□□□□ -1.36
UBE3B-207ENST00000537063 PRO1854Q9UHT4 67 aa6.56□□□□□ -1.36
UBE3B-207ENST00000537063 F5H768 121 aa6.55□□□□□ -1.36
UBE3B-207ENST00000537063 TRGV4A0A0C4DH28 118 aa6.55□□□□□ -1.36
UBE3B-207ENST00000537063 WIPF1O43516 503 aa6.55□□□□□ -1.36
UBE3B-207ENST00000537063 APOMO95445 188 aa6.55□□□□□ -1.36
UBE3B-207ENST00000537063 MIAQ16674 131 aa6.55□□□□□ -1.36
UBE3B-207ENST00000537063 CBY1Q9Y3M2 126 aa6.55□□□□□ -1.36
UBE3B-207ENST00000537063 A8MZ25 164 aa6.55□□□□□ -1.36
UBE3B-207ENST00000537063 SMIM1B2RUZ4 78 aa6.55□□□□□ -1.36
UBE3B-207ENST00000537063 H3BMG7 143 aa6.55□□□□□ -1.36
UBE3B-207ENST00000537063 ADAMTSL4-AS1Q5T5F5 129 aa6.55□□□□□ -1.36
UBE3B-207ENST00000537063 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.54□□□□□ -1.36
UBE3B-207ENST00000537063 G3V4G9 280 aa6.54□□□□□ -1.36
UBE3B-207ENST00000537063 TRBV6-8A0A0A6YYG3 113 aa6.54□□□□□ -1.36
UBE3B-207ENST00000537063 IGHV3-33P01772 117 aa6.54□□□□□ -1.36
UBE3B-207ENST00000537063 LYRM7Q5U5X0 104 aa6.54□□□□□ -1.36
UBE3B-207ENST00000537063 FN1P02751 2386 aaKnown RBP6.53□□□□□ -1.36
UBE3B-207ENST00000537063 UBE2L6O14933 153 aa6.52□□□□□ -1.36
UBE3B-207ENST00000537063 VWFP04275 2813 aa6.52□□□□□ -1.36
UBE3B-207ENST00000537063 WFDC9Q8NEX5 89 aa6.52□□□□□ -1.37
UBE3B-207ENST00000537063 ZNF625Q96I27 306 aaPredicted RBP6.52□□□□□ -1.37
UBE3B-207ENST00000537063 C2CD3Q4AC94 2353 aa6.52□□□□□ -1.37
UBE3B-207ENST00000537063 NOTCH3Q9UM47 2321 aa6.52□□□□□ -1.37
UBE3B-207ENST00000537063 LYRM9A8MSI8 78 aa6.52□□□□□ -1.37
UBE3B-207ENST00000537063 IFITM1P13164 125 aa6.52□□□□□ -1.37
UBE3B-207ENST00000537063 WFDC2Q14508 124 aa6.52□□□□□ -1.37
UBE3B-207ENST00000537063 PPDPFQ9H3Y8 114 aa6.52□□□□□ -1.37
UBE3B-207ENST00000537063 TRBV20-1A0A075B6N2 111 aa6.51□□□□□ -1.37
UBE3B-207ENST00000537063 TRAV13-1A0A0B4J241 112 aa6.51□□□□□ -1.37
UBE3B-207ENST00000537063 HIVEP1P15822 2718 aa6.51□□□□□ -1.37
UBE3B-207ENST00000537063 TENM1Q9UKZ4 2725 aa6.5□□□□□ -1.37
UBE3B-207ENST00000537063 TEX48A0A1B0GUV7 120 aa6.5□□□□□ -1.37
UBE3B-207ENST00000537063 TCL1BO95988 128 aa6.5□□□□□ -1.37
UBE3B-207ENST00000537063 SMCPP49901 116 aaPredicted RBP6.5□□□□□ -1.37
UBE3B-207ENST00000537063 APOC4P55056 127 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms