RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 TIMM21Q9BVV7 248 aa5.76□□□□□ -1.49
CPSF7-216ENST00000536548 TMEM126AQ9H061 195 aa5.76□□□□□ -1.49
CPSF7-216ENST00000536548 PYGO1Q9Y3Y4 419 aa5.76□□□□□ -1.49
CPSF7-216ENST00000536548 ICOSQ9Y6W8 199 aa5.76□□□□□ -1.49
CPSF7-216ENST00000536548 TENM2Q9NT68 2774 aa5.76□□□□□ -1.49
CPSF7-216ENST00000536548 A0A087WWL8 130 aa5.75□□□□□ -1.49
CPSF7-216ENST00000536548 K7EMT4 169 aa5.75□□□□□ -1.49
CPSF7-216ENST00000536548 M0QY20 66 aa5.75□□□□□ -1.49
CPSF7-216ENST00000536548 SPRY2O43597 315 aa5.75□□□□□ -1.49
CPSF7-216ENST00000536548 TRIAP1O43715 76 aa5.75□□□□□ -1.49
CPSF7-216ENST00000536548 TIMM17BO60830 172 aa5.75□□□□□ -1.49
CPSF7-216ENST00000536548 AVPP01185 164 aa5.75□□□□□ -1.49
CPSF7-216ENST00000536548 COPS9Q8WXC6 57 aa5.75□□□□□ -1.49
CPSF7-216ENST00000536548 TMEM101Q96IK0 257 aa5.75□□□□□ -1.49
CPSF7-216ENST00000536548 RHPN1-AS1Q9BWJ2 59 aa5.75□□□□□ -1.49
CPSF7-216ENST00000536548 EDA2RQ9HAV5 297 aa5.75□□□□□ -1.49
CPSF7-216ENST00000536548 ZNF256Q9Y2P7 627 aaPredicted RBP5.75□□□□□ -1.49
CPSF7-216ENST00000536548 IGLV4-3A0A075B6K6 122 aa5.74□□□□□ -1.49
CPSF7-216ENST00000536548 TRGV11A0A075B6L2 103 aa5.74□□□□□ -1.49
CPSF7-216ENST00000536548 IGHV3-16A0A0C4DH30 117 aa5.74□□□□□ -1.49
CPSF7-216ENST00000536548 A0A0J9YXV3 536 aa5.74□□□□□ -1.49
CPSF7-216ENST00000536548 MIAQ16674 131 aa5.74□□□□□ -1.49
CPSF7-216ENST00000536548 IMUPQ9GZP8 106 aa5.74□□□□□ -1.49
CPSF7-216ENST00000536548 DAZ1Q9NQZ3 744 aaKnown RBP5.74□□□□□ -1.49
CPSF7-216ENST00000536548 LYSTQ99698 3801 aa5.73□□□□□ -1.49
CPSF7-216ENST00000536548 IGHV1-58A0A0C4DH39 117 aa5.73□□□□□ -1.49
CPSF7-216ENST00000536548 TRBV7-7A0A0K0K1E9 115 aa5.73□□□□□ -1.49
CPSF7-216ENST00000536548 F6UB75 175 aa5.73□□□□□ -1.49
CPSF7-216ENST00000536548 CCDC179H3BU77 68 aa5.73□□□□□ -1.49
CPSF7-216ENST00000536548 LST1O00453 97 aa5.73□□□□□ -1.49
CPSF7-216ENST00000536548 EIF4EBP3O60516 100 aaPredicted RBP5.73□□□□□ -1.49
CPSF7-216ENST00000536548 IGHV3-30-3P0DP02 117 aa5.73□□□□□ -1.49
CPSF7-216ENST00000536548 CD28P10747 220 aa5.73□□□□□ -1.49
CPSF7-216ENST00000536548 MRPS36P82909 103 aaKnown RBP5.73□□□□□ -1.49
CPSF7-216ENST00000536548 FAM74A4Q5TZK3 123 aa5.73□□□□□ -1.49
CPSF7-216ENST00000536548 UNQ9165/PRO28630Q6UXU0 137 aa5.73□□□□□ -1.49
CPSF7-216ENST00000536548 IGHV1OR15-1A0A075B7D0 117 aa5.72□□□□□ -1.49
CPSF7-216ENST00000536548 TRAV12-3A0A0B4J271 114 aa5.72□□□□□ -1.49
CPSF7-216ENST00000536548 TEX49A0A1B0GTD5 131 aa5.72□□□□□ -1.49
CPSF7-216ENST00000536548 TINCRA0A1B0GVN0 87 aa5.72□□□□□ -1.49
CPSF7-216ENST00000536548 B4DSR2 109 aa5.72□□□□□ -1.49
CPSF7-216ENST00000536548 H7C423 109 aa5.72□□□□□ -1.49
CPSF7-216ENST00000536548 ATP5G1P05496 136 aa5.72□□□□□ -1.49
CPSF7-216ENST00000536548 PRSS2P07478 247 aa5.72□□□□□ -1.49
CPSF7-216ENST00000536548 CIRBPQ14011 172 aaKnown RBP5.72□□□□□ -1.49
CPSF7-216ENST00000536548 CFAP161Q6P656 301 aa5.72□□□□□ -1.49
CPSF7-216ENST00000536548 LITAFQ99732 161 aa5.72□□□□□ -1.49
CPSF7-216ENST00000536548 JPT2Q9H910 190 aa5.72□□□□□ -1.49
CPSF7-216ENST00000536548 NDUFA12Q9UI09 145 aa5.72□□□□□ -1.49
CPSF7-216ENST00000536548 PLXNB1O43157 2135 aa5.72□□□□□ -1.49
CPSF7-216ENST00000536548 IGHV3-64A0A075B6Q5 118 aa5.71□□□□□ -1.5
CPSF7-216ENST00000536548 IGHG2P01859 326 aa5.71□□□□□ -1.5
CPSF7-216ENST00000536548 PF4V1P10720 104 aa5.71□□□□□ -1.5
CPSF7-216ENST00000536548 SNRPD3P62318 126 aaKnown RBP5.71□□□□□ -1.5
CPSF7-216ENST00000536548 BEAN1Q3B7T3 259 aa5.71□□□□□ -1.5
CPSF7-216ENST00000536548 MEIG1Q5JSS6 88 aa5.71□□□□□ -1.5
CPSF7-216ENST00000536548 TMEM61Q8N0U2 210 aa5.71□□□□□ -1.5
CPSF7-216ENST00000536548 MRAPQ8TCY5 172 aa5.71□□□□□ -1.5
CPSF7-216ENST00000536548 TRBV12-3P01733 135 aa5.7□□□□□ -1.5
CPSF7-216ENST00000536548 MSMBP08118 114 aa5.7□□□□□ -1.5
CPSF7-216ENST00000536548 DEFB1P60022 68 aa5.7□□□□□ -1.5
CPSF7-216ENST00000536548 LMO4P61968 165 aa5.7□□□□□ -1.5
CPSF7-216ENST00000536548 TMEM219Q86XT9 240 aa5.7□□□□□ -1.5
CPSF7-216ENST00000536548 RNF152Q8N8N0 203 aa5.7□□□□□ -1.5
CPSF7-216ENST00000536548 VSIG2Q96IQ7 327 aa5.7□□□□□ -1.5
CPSF7-216ENST00000536548 OPRPNQ99935 248 aaPredicted RBP5.7□□□□□ -1.5
CPSF7-216ENST00000536548 SPXQ9BT56 116 aa5.7□□□□□ -1.5
CPSF7-216ENST00000536548 ZNF580Q9UK33 172 aa5.7□□□□□ -1.5
CPSF7-216ENST00000536548 TNFRSF18Q9Y5U5 241 aa5.7□□□□□ -1.5
CPSF7-216ENST00000536548 WNK2Q9Y3S1 2297 aa5.7□□□□□ -1.5
CPSF7-216ENST00000536548 IGKV3-7A0A075B6H7 116 aa5.69□□□□□ -1.5
CPSF7-216ENST00000536548 DNAJC9-AS1A6NH13 148 aa5.69□□□□□ -1.5
CPSF7-216ENST00000536548 ELANEP08246 267 aa5.69□□□□□ -1.5
CPSF7-216ENST00000536548 KRTAP10-3P60369 221 aa5.69□□□□□ -1.5
CPSF7-216ENST00000536548 PIK3CD-AS1Q5SR53 167 aa5.69□□□□□ -1.5
CPSF7-216ENST00000536548 DCANP1Q8TF63 244 aa5.69□□□□□ -1.5
CPSF7-216ENST00000536548 DNAJC30Q96LL9 226 aa5.69□□□□□ -1.5
CPSF7-216ENST00000536548 HERC2O95714 4834 aa5.68□□□□□ -1.5
CPSF7-216ENST00000536548 ARHGAP32A7KAX9 2087 aa5.68□□□□□ -1.5
CPSF7-216ENST00000536548 AGRNO00468 2067 aa5.68□□□□□ -1.5
CPSF7-216ENST00000536548 A6NDX4 124 aa5.68□□□□□ -1.5
CPSF7-216ENST00000536548 NDUFA1O15239 70 aa5.68□□□□□ -1.5
CPSF7-216ENST00000536548 IGLV1-40P01703 118 aa5.68□□□□□ -1.5
CPSF7-216ENST00000536548 IGHV3-11P01762 117 aa5.68□□□□□ -1.5
CPSF7-216ENST00000536548 TIRAPP58753 221 aa5.68□□□□□ -1.5
CPSF7-216ENST00000536548 LINC00643Q86TS7 51 aa5.68□□□□□ -1.5
CPSF7-216ENST00000536548 SMIM20Q8N5G0 67 aa5.68□□□□□ -1.5
CPSF7-216ENST00000536548 PPDPFQ9H3Y8 114 aa5.68□□□□□ -1.5
CPSF7-216ENST00000536548 LINC00527Q9UJ94 153 aa5.68□□□□□ -1.5
CPSF7-216ENST00000536548 NOTCH3Q9UM47 2321 aa5.68□□□□□ -1.5
CPSF7-216ENST00000536548 FRAS1Q86XX4 4008 aa5.67□□□□□ -1.5
CPSF7-216ENST00000536548 K7EQG2 157 aa5.67□□□□□ -1.5
CPSF7-216ENST00000536548 COX7A2LO14548 114 aa5.67□□□□□ -1.5
CPSF7-216ENST00000536548 TRACP01848 142 aa5.67□□□□□ -1.5
CPSF7-216ENST00000536548 INAFM2P0DMQ5 153 aa5.67□□□□□ -1.5
CPSF7-216ENST00000536548 CXCL5P42830 114 aa5.67□□□□□ -1.5
CPSF7-216ENST00000536548 HERV-K104P63124 156 aa5.67□□□□□ -1.5
CPSF7-216ENST00000536548 DEFB104AQ8WTQ1 72 aa5.67□□□□□ -1.5
CPSF7-216ENST00000536548 CLEC2BQ92478 149 aa5.67□□□□□ -1.5
CPSF7-216ENST00000536548 WWC2-AS2Q96NR7 200 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms