RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 ATXN8Q156A1 80 aa4.12□□□□□ -1.75
VPS33A-203ENST00000536212 MIAQ16674 131 aa4.12□□□□□ -1.75
VPS33A-203ENST00000536212 ADAMTSL4-AS1Q5T5F5 129 aa4.12□□□□□ -1.75
VPS33A-203ENST00000536212 FAM19A5Q7Z5A7 132 aaPredicted RBP4.12□□□□□ -1.75
VPS33A-203ENST00000536212 STHQ8IWL8 128 aa4.12□□□□□ -1.75
VPS33A-203ENST00000536212 C4orf3Q8WVX3 66 aa4.12□□□□□ -1.75
VPS33A-203ENST00000536212 MAP6D1Q9H9H5 199 aa4.12□□□□□ -1.75
VPS33A-203ENST00000536212 NDUFA12Q9UI09 145 aa4.12□□□□□ -1.75
VPS33A-203ENST00000536212 DSPP15924 2871 aaKnown RBP4.12□□□□□ -1.75
VPS33A-203ENST00000536212 MUC3AQ02505 3323 aa4.12□□□□□ -1.75
VPS33A-203ENST00000536212 WNK2Q9Y3S1 2297 aa4.11□□□□□ -1.75
VPS33A-203ENST00000536212 ABCA2Q9BZC7 2435 aa4.11□□□□□ -1.75
VPS33A-203ENST00000536212 NBEAQ8NFP9 2946 aa4.11□□□□□ -1.75
VPS33A-203ENST00000536212 IGHV3-73A0A0B4J1V6 119 aa4.11□□□□□ -1.75
VPS33A-203ENST00000536212 NDUFA1O15239 70 aa4.11□□□□□ -1.75
VPS33A-203ENST00000536212 DEFB114Q30KQ6 69 aa4.11□□□□□ -1.75
VPS33A-203ENST00000536212 GAGE2AQ6NT46 116 aa4.11□□□□□ -1.75
VPS33A-203ENST00000536212 CEMP1Q6PRD7 247 aaPredicted RBP4.11□□□□□ -1.75
VPS33A-203ENST00000536212 C18orf65Q6ZTR6 163 aa4.11□□□□□ -1.75
VPS33A-203ENST00000536212 TMEM61Q8N0U2 210 aa4.11□□□□□ -1.75
VPS33A-203ENST00000536212 Q9UF83 564 aa4.11□□□□□ -1.75
VPS33A-203ENST00000536212 PTPRZ1P23471 2315 aaPredicted RBP4.11□□□□□ -1.75
VPS33A-203ENST00000536212 AKAP13Q12802 2813 aa4.1□□□□□ -1.75
VPS33A-203ENST00000536212 MAP1BP46821 2468 aaKnown RBP4.1□□□□□ -1.75
VPS33A-203ENST00000536212 RIF1Q5UIP0 2472 aaKnown RBP4.1□□□□□ -1.75
VPS33A-203ENST00000536212 IGLV5-39A0A0G2JS06 123 aa4.1□□□□□ -1.75
VPS33A-203ENST00000536212 H3BT86 120 aa4.1□□□□□ -1.75
VPS33A-203ENST00000536212 INSP01308 110 aa4.1□□□□□ -1.75
VPS33A-203ENST00000536212 DEFB121Q5J5C9 76 aa4.1□□□□□ -1.75
VPS33A-203ENST00000536212 TMEM86BQ8N661 226 aa4.1□□□□□ -1.75
VPS33A-203ENST00000536212 TMEM101Q96IK0 257 aa4.1□□□□□ -1.75
VPS33A-203ENST00000536212 LINC01587Q99440 93 aa4.1□□□□□ -1.75
VPS33A-203ENST00000536212 ICOSQ9Y6W8 199 aa4.1□□□□□ -1.75
VPS33A-203ENST00000536212 MED13LQ71F56 2210 aa4.1□□□□□ -1.75
VPS33A-203ENST00000536212 ZZEF1O43149 2961 aa4.1□□□□□ -1.75
VPS33A-203ENST00000536212 MGAQ8IWI9 3026 aa4.1□□□□□ -1.75
VPS33A-203ENST00000536212 ZFHX4Q86UP3 3567 aa4.09□□□□□ -1.75
VPS33A-203ENST00000536212 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.09□□□□□ -1.75
VPS33A-203ENST00000536212 IGHV3OR16-12A0A075B7B8 117 aa4.09□□□□□ -1.75
VPS33A-203ENST00000536212 TRBV10-1A0A0K0K1A3 114 aa4.09□□□□□ -1.75
VPS33A-203ENST00000536212 IGKV2-29A2NJV5 120 aaPredicted RBP4.09□□□□□ -1.75
VPS33A-203ENST00000536212 PRM2P04554 102 aa4.09□□□□□ -1.75
VPS33A-203ENST00000536212 NHLRC4P0CG21 123 aaPredicted RBP4.09□□□□□ -1.75
VPS33A-203ENST00000536212 HERVK_113P63121 156 aa4.09□□□□□ -1.75
VPS33A-203ENST00000536212 DEFB136Q30KP8 78 aa4.09□□□□□ -1.75
VPS33A-203ENST00000536212 RNASE13Q5GAN3 156 aaKnown RBP4.09□□□□□ -1.75
VPS33A-203ENST00000536212 C1orf158Q8N1D5 194 aa4.09□□□□□ -1.75
VPS33A-203ENST00000536212 DYNLRB2Q8TF09 96 aa4.09□□□□□ -1.75
VPS33A-203ENST00000536212 NTN5Q8WTR8 489 aaPredicted RBP4.09□□□□□ -1.75
VPS33A-203ENST00000536212 IMUPQ9GZP8 106 aa4.09□□□□□ -1.75
VPS33A-203ENST00000536212 CDKN2A-AS1Q9UH64 79 aa4.09□□□□□ -1.75
VPS33A-203ENST00000536212 TPRP12270 2363 aaKnown RBP4.09□□□□□ -1.76
VPS33A-203ENST00000536212 H7C2G1 150 aa4.08□□□□□ -1.76
VPS33A-203ENST00000536212 H7C423 109 aa4.08□□□□□ -1.76
VPS33A-203ENST00000536212 LST1O00453 97 aa4.08□□□□□ -1.76
VPS33A-203ENST00000536212 UQCRQO14949 82 aa4.08□□□□□ -1.76
VPS33A-203ENST00000536212 NDUFA7O95182 113 aa4.08□□□□□ -1.76
VPS33A-203ENST00000536212 PRSS2P07478 247 aa4.08□□□□□ -1.76
VPS33A-203ENST00000536212 COX6CP09669 75 aa4.08□□□□□ -1.76
VPS33A-203ENST00000536212 HTN1P15515 57 aa4.08□□□□□ -1.76
VPS33A-203ENST00000536212 CACNA1BQ00975 2339 aa4.08□□□□□ -1.76
VPS33A-203ENST00000536212 COX6A2Q02221 97 aa4.08□□□□□ -1.76
VPS33A-203ENST00000536212 Q1RN00 199 aa4.08□□□□□ -1.76
VPS33A-203ENST00000536212 ODF3L2Q3SX64 289 aa4.08□□□□□ -1.76
VPS33A-203ENST00000536212 LINC00242Q5T6M2 205 aa4.08□□□□□ -1.76
VPS33A-203ENST00000536212 ANKRD11Q6UB99 2663 aaPredicted RBP4.08□□□□□ -1.76
VPS33A-203ENST00000536212 CD164L2Q6UWJ8 174 aa4.08□□□□□ -1.76
VPS33A-203ENST00000536212 MUC6Q6W4X9 2439 aa4.08□□□□□ -1.76
VPS33A-203ENST00000536212 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.08□□□□□ -1.76
VPS33A-203ENST00000536212 MAPK1IP1LQ8NDC0 245 aa4.08□□□□□ -1.76
VPS33A-203ENST00000536212 ZNF292O60281 2723 aa4.08□□□□□ -1.76
VPS33A-203ENST00000536212 ZFHX2Q9C0A1 2572 aaPredicted RBP4.08□□□□□ -1.76
VPS33A-203ENST00000536212 TRAV4A0A0B4J268 109 aa4.07□□□□□ -1.76
VPS33A-203ENST00000536212 IGHV3-38A0A0C4DH36 116 aa4.07□□□□□ -1.76
VPS33A-203ENST00000536212 FAM240AA0A1B0GVK7 77 aa4.07□□□□□ -1.76
VPS33A-203ENST00000536212 CCDC179H3BU77 68 aa4.07□□□□□ -1.76
VPS33A-203ENST00000536212 CRLF1O75462 422 aa4.07□□□□□ -1.76
VPS33A-203ENST00000536212 LINC00694P0DN24 101 aa4.07□□□□□ -1.76
VPS33A-203ENST00000536212 CMC4P56277 68 aaPredicted RBP4.07□□□□□ -1.76
VPS33A-203ENST00000536212 TMEM258P61165 79 aa4.07□□□□□ -1.76
VPS33A-203ENST00000536212 DAZ2Q13117 558 aaKnown RBP4.07□□□□□ -1.76
VPS33A-203ENST00000536212 CIRBPQ14011 172 aaKnown RBP4.07□□□□□ -1.76
VPS33A-203ENST00000536212 FHL2Q14192 279 aa4.07□□□□□ -1.76
VPS33A-203ENST00000536212 DEFB113Q30KQ7 82 aa4.07□□□□□ -1.76
VPS33A-203ENST00000536212 C2orf82Q6UX34 121 aa4.07□□□□□ -1.76
VPS33A-203ENST00000536212 NTM-AS1Q6ZSK4 140 aa4.07□□□□□ -1.76
VPS33A-203ENST00000536212 DAZ4Q86SG3 579 aaKnown RBP4.07□□□□□ -1.76
VPS33A-203ENST00000536212 LINC00308Q8TCZ7 52 aa4.07□□□□□ -1.76
VPS33A-203ENST00000536212 UBE2WQ96B02 151 aa4.07□□□□□ -1.76
VPS33A-203ENST00000536212 DAZ3Q9NR90 486 aaKnown RBP4.07□□□□□ -1.76
VPS33A-203ENST00000536212 TRAV8-4A0A0B4J246 113 aa4.06□□□□□ -1.76
VPS33A-203ENST00000536212 SMIM1B2RUZ4 78 aa4.06□□□□□ -1.76
VPS33A-203ENST00000536212 K7EQD1 137 aa4.06□□□□□ -1.76
VPS33A-203ENST00000536212 NDUFC2O95298 119 aa4.06□□□□□ -1.76
VPS33A-203ENST00000536212 RPL36AP83881 106 aaKnown RBP4.06□□□□□ -1.76
VPS33A-203ENST00000536212 SOSTDC1Q6X4U4 206 aa4.06□□□□□ -1.76
VPS33A-203ENST00000536212 Q6ZSV7 163 aa4.06□□□□□ -1.76
VPS33A-203ENST00000536212 COPS9Q8WXC6 57 aa4.06□□□□□ -1.76
VPS33A-203ENST00000536212 RPL36ALQ969Q0 106 aaKnown RBP4.06□□□□□ -1.76
VPS33A-203ENST00000536212 ZNF625Q96I27 306 aaPredicted RBP4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms