RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 K7EPK0 472 aa1.73□□□□□ -2.13
SNHG1-202ENST00000535689 SYNGR2O43760 224 aa1.73□□□□□ -2.13
SNHG1-202ENST00000535689 ANGP03950 147 aaKnown RBP1.73□□□□□ -2.13
SNHG1-202ENST00000535689 TCRBP04435 133 aa1.73□□□□□ -2.13
SNHG1-202ENST00000535689 SDC2P34741 201 aa1.73□□□□□ -2.13
SNHG1-202ENST00000535689 UBE2D1P51668 147 aa1.73□□□□□ -2.13
SNHG1-202ENST00000535689 RBX1P62877 108 aa1.73□□□□□ -2.13
SNHG1-202ENST00000535689 BAXQ07812 192 aa1.73□□□□□ -2.13
SNHG1-202ENST00000535689 PMVKQ15126 192 aa1.73□□□□□ -2.13
SNHG1-202ENST00000535689 SCGB2B2Q4G0G5 96 aa1.73□□□□□ -2.13
SNHG1-202ENST00000535689 SPANXN5Q5MJ07 72 aa1.73□□□□□ -2.13
SNHG1-202ENST00000535689 Q6AWC8 147 aa1.73□□□□□ -2.13
SNHG1-202ENST00000535689 KRTAP5-5Q701N2 237 aaPredicted RBP1.73□□□□□ -2.13
SNHG1-202ENST00000535689 LHFPL1Q86WI0 220 aa1.73□□□□□ -2.13
SNHG1-202ENST00000535689 C3orf22Q8N5N4 141 aa1.73□□□□□ -2.13
SNHG1-202ENST00000535689 YPEL4Q96NS1 127 aa1.73□□□□□ -2.13
SNHG1-202ENST00000535689 PRRT1Q99946 306 aa1.73□□□□□ -2.13
SNHG1-202ENST00000535689 AGPAT4-IT1Q9H0P7 198 aa1.73□□□□□ -2.13
SNHG1-202ENST00000535689 NAA60Q9H7X0 242 aa1.73□□□□□ -2.13
SNHG1-202ENST00000535689 SPANXB1Q9NS25 103 aaPredicted RBP1.73□□□□□ -2.13
SNHG1-202ENST00000535689 LYRM2Q9NU23 88 aaPredicted RBP1.73□□□□□ -2.13
SNHG1-202ENST00000535689 SCP2D1Q9UJQ7 156 aa1.73□□□□□ -2.13
SNHG1-202ENST00000535689 CARHSP1Q9Y2V2 147 aaKnown RBP1.73□□□□□ -2.13
SNHG1-202ENST00000535689 FAT4Q6V0I7 4981 aa1.73□□□□□ -2.13
SNHG1-202ENST00000535689 IGLV10-54A0A075B6I4 117 aa1.72□□□□□ -2.13
SNHG1-202ENST00000535689 LOC389332A0A1B0GUA5 103 aa1.72□□□□□ -2.13
SNHG1-202ENST00000535689 K7ERS5 55 aa1.72□□□□□ -2.13
SNHG1-202ENST00000535689 CRYGAP11844 174 aa1.72□□□□□ -2.13
SNHG1-202ENST00000535689 KRTAP10-10P60014 251 aa1.72□□□□□ -2.13
SNHG1-202ENST00000535689 S100A10P60903 97 aa1.72□□□□□ -2.13
SNHG1-202ENST00000535689 HBG1P69891 147 aa1.72□□□□□ -2.13
SNHG1-202ENST00000535689 HBG2P69892 147 aa1.72□□□□□ -2.13
SNHG1-202ENST00000535689 MRPS10P82664 201 aaKnown RBP1.72□□□□□ -2.13
SNHG1-202ENST00000535689 IL15RAQ13261 267 aa1.72□□□□□ -2.13
SNHG1-202ENST00000535689 FAM162BQ5T6X4 162 aa1.72□□□□□ -2.13
SNHG1-202ENST00000535689 CFAP126Q5VTH2 177 aa1.72□□□□□ -2.13
SNHG1-202ENST00000535689 TMEM229BQ8NBD8 167 aa1.72□□□□□ -2.13
SNHG1-202ENST00000535689 OR5H6Q8NGV6 325 aa1.72□□□□□ -2.13
SNHG1-202ENST00000535689 SPACA4Q8TDM5 124 aa1.72□□□□□ -2.13
SNHG1-202ENST00000535689 ASB13Q8WXK3 278 aa1.72□□□□□ -2.13
SNHG1-202ENST00000535689 PARD6GQ9BYG4 376 aaPredicted RBP1.72□□□□□ -2.13
SNHG1-202ENST00000535689 VCX3BQ9H321 246 aa1.72□□□□□ -2.13
SNHG1-202ENST00000535689 PSENENQ9NZ42 101 aa1.72□□□□□ -2.13
SNHG1-202ENST00000535689 TMEM14CQ9P0S9 112 aa1.72□□□□□ -2.13
SNHG1-202ENST00000535689 MUC2Q02817 5179 aa1.71□□□□□ -2.13
SNHG1-202ENST00000535689 TRBV7-3A0A075B6L6 115 aa1.71□□□□□ -2.14
SNHG1-202ENST00000535689 TRBV19A0A075B6N1 114 aa1.71□□□□□ -2.14
SNHG1-202ENST00000535689 TRBV10-1A0A0K0K1A3 114 aa1.71□□□□□ -2.14
SNHG1-202ENST00000535689 A0A1B0GVG6 124 aa1.71□□□□□ -2.14
SNHG1-202ENST00000535689 GNRH2O43555 120 aa1.71□□□□□ -2.14
SNHG1-202ENST00000535689 CXorf1O96002 111 aa1.71□□□□□ -2.14
SNHG1-202ENST00000535689 MT-ND6P03923 174 aa1.71□□□□□ -2.14
SNHG1-202ENST00000535689 CD3DP04234 171 aa1.71□□□□□ -2.14
SNHG1-202ENST00000535689 NBEAP1P0C6P0 100 aa1.71□□□□□ -2.14
SNHG1-202ENST00000535689 AKAIN1P0CW23 69 aa1.71□□□□□ -2.14
SNHG1-202ENST00000535689 SCGB1C2P0DMR2 95 aa1.71□□□□□ -2.14
SNHG1-202ENST00000535689 IGLC2P0DOY2 106 aa1.71□□□□□ -2.14
SNHG1-202ENST00000535689 IAPPP10997 89 aa1.71□□□□□ -2.14
SNHG1-202ENST00000535689 S100A4P26447 101 aaKnown RBP1.71□□□□□ -2.14
SNHG1-202ENST00000535689 TAS2R30P59541 319 aa1.71□□□□□ -2.14
SNHG1-202ENST00000535689 COX6A2Q02221 97 aa1.71□□□□□ -2.14
SNHG1-202ENST00000535689 TMEM128Q5BJH2 165 aa1.71□□□□□ -2.14
SNHG1-202ENST00000535689 ENHOQ6UWT2 76 aa1.71□□□□□ -2.14
SNHG1-202ENST00000535689 PATE2Q6UY27 113 aa1.71□□□□□ -2.14
SNHG1-202ENST00000535689 Q6ZQT7 251 aa1.71□□□□□ -2.14
SNHG1-202ENST00000535689 LYZL2Q7Z4W2 148 aa1.71□□□□□ -2.14
SNHG1-202ENST00000535689 ZFAND2AQ8N6M9 145 aa1.71□□□□□ -2.14
SNHG1-202ENST00000535689 SCGB1C1Q8TD33 95 aa1.71□□□□□ -2.14
SNHG1-202ENST00000535689 RAB2BQ8WUD1 216 aa1.71□□□□□ -2.14
SNHG1-202ENST00000535689 MRAP2Q96G30 205 aa1.71□□□□□ -2.14
SNHG1-202ENST00000535689 MRPS26Q9BYN8 205 aaKnown RBP1.71□□□□□ -2.14
SNHG1-202ENST00000535689 NMES1Q9C002 83 aa1.71□□□□□ -2.14
SNHG1-202ENST00000535689 LPAP08519 4548 aa1.71□□□□□ -2.14
SNHG1-202ENST00000535689 TRBV6-8A0A0A6YYG3 113 aa1.7□□□□□ -2.14
SNHG1-202ENST00000535689 FAM25AB3EWG3 89 aa1.7□□□□□ -2.14
SNHG1-202ENST00000535689 FAM25CB3EWG5 89 aa1.7□□□□□ -2.14
SNHG1-202ENST00000535689 FAM25GB3EWG6 89 aa1.7□□□□□ -2.14
SNHG1-202ENST00000535689 H3BQ15 152 aa1.7□□□□□ -2.14
SNHG1-202ENST00000535689 PVALBP20472 110 aaPredicted RBP1.7□□□□□ -2.14
SNHG1-202ENST00000535689 FAUP35544 74 aaKnown RBP1.7□□□□□ -2.14
SNHG1-202ENST00000535689 GABARAPL2P60520 117 aa1.7□□□□□ -2.14
SNHG1-202ENST00000535689 RAB2AP61019 212 aa1.7□□□□□ -2.14
SNHG1-202ENST00000535689 EIF5AP63241 154 aaKnown RBP1.7□□□□□ -2.14
SNHG1-202ENST00000535689 IAH1Q2TAA2 248 aaPredicted RBP1.7□□□□□ -2.14
SNHG1-202ENST00000535689 LGALSLQ3ZCW2 172 aaPredicted RBP1.7□□□□□ -2.14
SNHG1-202ENST00000535689 SNX29P2Q8IUI4 249 aa1.7□□□□□ -2.14
SNHG1-202ENST00000535689 CLVS1Q8IUQ0 354 aaPredicted RBP1.7□□□□□ -2.14
SNHG1-202ENST00000535689 LINC00337Q8N6G1 96 aa1.7□□□□□ -2.14
SNHG1-202ENST00000535689 LINC00304Q8N9R0 145 aa1.7□□□□□ -2.14
SNHG1-202ENST00000535689 OR2T35Q8NGX2 323 aa1.7□□□□□ -2.14
SNHG1-202ENST00000535689 AP3S1Q92572 193 aa1.7□□□□□ -2.14
SNHG1-202ENST00000535689 COMMD3Q9UBI1 195 aa1.7□□□□□ -2.14
SNHG1-202ENST00000535689 NAGKQ9UJ70 344 aa1.7□□□□□ -2.14
SNHG1-202ENST00000535689 TRBV25-1A0A075B6N4 114 aa1.69□□□□□ -2.14
SNHG1-202ENST00000535689 IGHV3-73A0A0B4J1V6 119 aa1.69□□□□□ -2.14
SNHG1-202ENST00000535689 FABP5P3A8MUU1 101 aa1.69□□□□□ -2.14
SNHG1-202ENST00000535689 SMLR1H3BR10 107 aa1.69□□□□□ -2.14
SNHG1-202ENST00000535689 M0QXV9 152 aa1.69□□□□□ -2.14
SNHG1-202ENST00000535689 M0R3E3 92 aa1.69□□□□□ -2.14
SNHG1-202ENST00000535689 HPGDSO60760 199 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms