RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 TRRAPQ9Y4A5 3859 aa4.05□□□□□ -1.76
CHKA-208ENST00000533910 IGHV3OR16-12A0A075B7B8 117 aa4.05□□□□□ -1.76
CHKA-208ENST00000533910 LEPROTL1O95214 131 aa4.05□□□□□ -1.76
CHKA-208ENST00000533910 KRTDAPP60985 99 aa4.05□□□□□ -1.76
CHKA-208ENST00000533910 ZNF56Q15929 161 aa4.05□□□□□ -1.76
CHKA-208ENST00000533910 FAM74A4Q5TZK3 123 aa4.05□□□□□ -1.76
CHKA-208ENST00000533910 CFAP126Q5VTH2 177 aa4.05□□□□□ -1.76
CHKA-208ENST00000533910 ZFP2Q6ZN57 461 aa4.05□□□□□ -1.76
CHKA-208ENST00000533910 TEX43Q6ZNM6 134 aa4.05□□□□□ -1.76
CHKA-208ENST00000533910 LINC00173Q6ZV60 143 aa4.05□□□□□ -1.76
CHKA-208ENST00000533910 LINC01561Q8N1V8 128 aa4.05□□□□□ -1.76
CHKA-208ENST00000533910 OVOL2Q9BRP0 275 aa4.05□□□□□ -1.76
CHKA-208ENST00000533910 NIT2Q9NQR4 276 aa4.05□□□□□ -1.76
CHKA-208ENST00000533910 MRPL16Q9NX20 251 aaKnown RBP4.05□□□□□ -1.76
CHKA-208ENST00000533910 Q9UF83 564 aa4.05□□□□□ -1.76
CHKA-208ENST00000533910 HSPB8Q9UJY1 196 aa4.05□□□□□ -1.76
CHKA-208ENST00000533910 PKD1L1Q8TDX9 2849 aa4.05□□□□□ -1.76
CHKA-208ENST00000533910 TRBV27A0A0K0K1C4 114 aa4.04□□□□□ -1.76
CHKA-208ENST00000533910 SYS1-DBNDD2H3BUS1 97 aa4.04□□□□□ -1.76
CHKA-208ENST00000533910 H7C1H1 209 aa4.04□□□□□ -1.76
CHKA-208ENST00000533910 K7ERU9 68 aa4.04□□□□□ -1.76
CHKA-208ENST00000533910 IGHV3-53P01767 116 aa4.04□□□□□ -1.76
CHKA-208ENST00000533910 ZNF25P17030 456 aaPredicted RBP4.04□□□□□ -1.76
CHKA-208ENST00000533910 FCER1GP30273 86 aa4.04□□□□□ -1.76
CHKA-208ENST00000533910 HNRNPA3P51991 378 aaKnown RBP4.04□□□□□ -1.76
CHKA-208ENST00000533910 POLR2KP53803 58 aaKnown RBP4.04□□□□□ -1.76
CHKA-208ENST00000533910 APOC4P55056 127 aa4.04□□□□□ -1.76
CHKA-208ENST00000533910 KRTAP10-11P60412 298 aa4.04□□□□□ -1.76
CHKA-208ENST00000533910 CKS1BP61024 79 aa4.04□□□□□ -1.76
CHKA-208ENST00000533910 RPL18AQ02543 176 aaKnown RBP4.04□□□□□ -1.76
CHKA-208ENST00000533910 C4orf26Q17RF5 130 aa4.04□□□□□ -1.76
CHKA-208ENST00000533910 RRN3P1Q2M238 152 aa4.04□□□□□ -1.76
CHKA-208ENST00000533910 ORMDL2Q53FV1 153 aa4.04□□□□□ -1.76
CHKA-208ENST00000533910 SPATA12Q7Z6I5 190 aa4.04□□□□□ -1.76
CHKA-208ENST00000533910 LINC00612Q8N6U2 182 aa4.04□□□□□ -1.76
CHKA-208ENST00000533910 ZNRF2Q8NHG8 242 aa4.04□□□□□ -1.76
CHKA-208ENST00000533910 TMEM70Q9BUB7 260 aa4.04□□□□□ -1.76
CHKA-208ENST00000533910 ST20Q9HBF5 79 aa4.04□□□□□ -1.76
CHKA-208ENST00000533910 ANK2Q01484 3957 aa4.03□□□□□ -1.76
CHKA-208ENST00000533910 TRGV1A0A0A0MS02 117 aa4.03□□□□□ -1.76
CHKA-208ENST00000533910 TRAV4A0A0B4J268 109 aa4.03□□□□□ -1.76
CHKA-208ENST00000533910 SDHAF1A6NFY7 115 aa4.03□□□□□ -1.76
CHKA-208ENST00000533910 RIPPLY3P57055 190 aa4.03□□□□□ -1.76
CHKA-208ENST00000533910 LINC01545Q5VT33 79 aa4.03□□□□□ -1.76
CHKA-208ENST00000533910 Q6ZTI0 123 aa4.03□□□□□ -1.76
CHKA-208ENST00000533910 DNAJC30Q96LL9 226 aa4.03□□□□□ -1.76
CHKA-208ENST00000533910 C18orf15Q96N68 181 aa4.03□□□□□ -1.76
CHKA-208ENST00000533910 IGLV9-49A0A0B4J1Y8 123 aa4.02□□□□□ -1.77
CHKA-208ENST00000533910 TRBV10-1A0A0K0K1A3 114 aa4.02□□□□□ -1.77
CHKA-208ENST00000533910 C20orf202A1L168 122 aa4.02□□□□□ -1.77
CHKA-208ENST00000533910 A6NDN8 102 aa4.02□□□□□ -1.77
CHKA-208ENST00000533910 TSHBP01222 138 aa4.02□□□□□ -1.77
CHKA-208ENST00000533910 RHOHQ15669 191 aa4.02□□□□□ -1.77
CHKA-208ENST00000533910 TOMM6Q96B49 74 aa4.02□□□□□ -1.77
CHKA-208ENST00000533910 IFI27L1Q96BM0 104 aa4.02□□□□□ -1.77
CHKA-208ENST00000533910 NOP10Q9NPE3 64 aaKnown RBP4.02□□□□□ -1.77
CHKA-208ENST00000533910 IGHV3-73A0A0B4J1V6 119 aa4.01□□□□□ -1.77
CHKA-208ENST00000533910 LINC01549A6NIU2 74 aa4.01□□□□□ -1.77
CHKA-208ENST00000533910 I3L3M4 83 aa4.01□□□□□ -1.77
CHKA-208ENST00000533910 K7EQD1 137 aa4.01□□□□□ -1.77
CHKA-208ENST00000533910 P0DMU3 169 aa4.01□□□□□ -1.77
CHKA-208ENST00000533910 FAM231AP0DMU4 169 aa4.01□□□□□ -1.77
CHKA-208ENST00000533910 FAM231CP0DMU5 169 aa4.01□□□□□ -1.77
CHKA-208ENST00000533910 PKIAP61925 76 aa4.01□□□□□ -1.77
CHKA-208ENST00000533910 DEFB135Q30KP9 77 aa4.01□□□□□ -1.77
CHKA-208ENST00000533910 C1orf195Q5TG92 126 aa4.01□□□□□ -1.77
CHKA-208ENST00000533910 LGALS9CQ6DKI2 356 aa4.01□□□□□ -1.77
CHKA-208ENST00000533910 NEGR1Q7Z3B1 354 aa4.01□□□□□ -1.77
CHKA-208ENST00000533910 NFE4Q86UQ8 179 aa4.01□□□□□ -1.77
CHKA-208ENST00000533910 Q8NAQ8 132 aa4.01□□□□□ -1.77
CHKA-208ENST00000533910 KIR2DL4Q99706 377 aa4.01□□□□□ -1.77
CHKA-208ENST00000533910 TMEM126AQ9H061 195 aa4.01□□□□□ -1.77
CHKA-208ENST00000533910 DNAH3Q8TD57 4116 aa4.01□□□□□ -1.77
CHKA-208ENST00000533910 NBEAL1Q6ZS30 2694 aa4□□□□□ -1.77
CHKA-208ENST00000533910 TRBV6-4A0A1B0GX49 114 aa4□□□□□ -1.77
CHKA-208ENST00000533910 LINC00694P0DN24 101 aa4□□□□□ -1.77
CHKA-208ENST00000533910 MIFP14174 115 aa4□□□□□ -1.77
CHKA-208ENST00000533910 SRSF9Q13242 221 aaKnown RBP eCLIP4□□□□□ -1.77
CHKA-208ENST00000533910 ZFAND6Q6FIF0 208 aa4□□□□□ -1.77
CHKA-208ENST00000533910 C2orf66Q6UXQ4 117 aa4□□□□□ -1.77
CHKA-208ENST00000533910 ZNF664Q8N3J9 261 aa4□□□□□ -1.77
CHKA-208ENST00000533910 VAMP8Q9BV40 100 aa4□□□□□ -1.77
CHKA-208ENST00000533910 Q9HAA7 133 aa4□□□□□ -1.77
CHKA-208ENST00000533910 SS18L2Q9UHA2 77 aa4□□□□□ -1.77
CHKA-208ENST00000533910 CMYA5Q8N3K9 4069 aa4□□□□□ -1.77
CHKA-208ENST00000533910 NOTCH1P46531 2555 aa4□□□□□ -1.77
CHKA-208ENST00000533910 NBEAL2Q6ZNJ1 2754 aa3.99□□□□□ -1.77
CHKA-208ENST00000533910 TRGV2A0A075B6R0 118 aa3.99□□□□□ -1.77
CHKA-208ENST00000533910 TRAV9-2A0A087WT02 112 aa3.99□□□□□ -1.77
CHKA-208ENST00000533910 TRAV12-1A0A0B4J245 112 aa3.99□□□□□ -1.77
CHKA-208ENST00000533910 A0A0U1RQV1 116 aa3.99□□□□□ -1.77
CHKA-208ENST00000533910 IGIPA6NJ69 53 aa3.99□□□□□ -1.77
CHKA-208ENST00000533910 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.99□□□□□ -1.77
CHKA-208ENST00000533910 CDK2AP2O75956 126 aa3.99□□□□□ -1.77
CHKA-208ENST00000533910 UBE2D3P61077 147 aa3.99□□□□□ -1.77
CHKA-208ENST00000533910 UBE2D2P62837 147 aa3.99□□□□□ -1.77
CHKA-208ENST00000533910 RPS28P62857 69 aaKnown RBP3.99□□□□□ -1.77
CHKA-208ENST00000533910 KPRPQ5T749 579 aaPredicted RBP3.99□□□□□ -1.77
CHKA-208ENST00000533910 SLC25A29Q8N8R3 303 aa3.99□□□□□ -1.77
CHKA-208ENST00000533910 C20orf203Q8NBC4 194 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms