RNA–Protein interactions for RNA: ENST00000533232.5

SOX9-AS1-212, SOX9 antisense RNA 1, humanhuman

TSL 1 (best)

Gene SOX9-AS1, Length 1,739 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-212ENST00000533232 XCL2Q9UBD3 114 aa5.65□□□□□ -1.51
SOX9-AS1-212ENST00000533232 CHD8Q9HCK8 2581 aa5.64□□□□□ -1.51
SOX9-AS1-212ENST00000533232 TRGV1A0A0A0MS02 117 aa5.64□□□□□ -1.51
SOX9-AS1-212ENST00000533232 A0A1B0GV72 72 aa5.64□□□□□ -1.51
SOX9-AS1-212ENST00000533232 H7C423 109 aa5.64□□□□□ -1.51
SOX9-AS1-212ENST00000533232 PRB1P04280 392 aa5.64□□□□□ -1.51
SOX9-AS1-212ENST00000533232 ODF3L2Q3SX64 289 aa5.64□□□□□ -1.51
SOX9-AS1-212ENST00000533232 CEMP1Q6PRD7 247 aaPredicted RBP5.64□□□□□ -1.51
SOX9-AS1-212ENST00000533232 Q6ZSN1 163 aa5.64□□□□□ -1.51
SOX9-AS1-212ENST00000533232 Q6ZUT4 128 aa5.64□□□□□ -1.51
SOX9-AS1-212ENST00000533232 IL17DQ8TAD2 202 aa5.64□□□□□ -1.51
SOX9-AS1-212ENST00000533232 LITAFQ99732 161 aa5.64□□□□□ -1.51
SOX9-AS1-212ENST00000533232 PKD1L2Q7Z442 2459 aa5.64□□□□□ -1.51
SOX9-AS1-212ENST00000533232 TRAV8-3A0A0A6YYJ7 113 aa5.63□□□□□ -1.51
SOX9-AS1-212ENST00000533232 DNAJC9-AS1A6NH13 148 aa5.63□□□□□ -1.51
SOX9-AS1-212ENST00000533232 C9JAW5 83 aa5.63□□□□□ -1.51
SOX9-AS1-212ENST00000533232 SPINK8P0C7L1 97 aa5.63□□□□□ -1.51
SOX9-AS1-212ENST00000533232 KRTAP10-9P60411 292 aa5.63□□□□□ -1.51
SOX9-AS1-212ENST00000533232 C1orf158Q8N1D5 194 aa5.63□□□□□ -1.51
SOX9-AS1-212ENST00000533232 ANKRD29Q8N6D5 301 aa5.63□□□□□ -1.51
SOX9-AS1-212ENST00000533232 C16orf74Q96GX8 76 aa5.63□□□□□ -1.51
SOX9-AS1-212ENST00000533232 TMEM101Q96IK0 257 aa5.63□□□□□ -1.51
SOX9-AS1-212ENST00000533232 PPDPFQ9H3Y8 114 aa5.63□□□□□ -1.51
SOX9-AS1-212ENST00000533232 DOPEY2Q9Y3R5 2298 aa5.63□□□□□ -1.51
SOX9-AS1-212ENST00000533232 IGHV3-38A0A0C4DH36 116 aa5.62□□□□□ -1.51
SOX9-AS1-212ENST00000533232 TRBV10-2A0A0K0K1G8 114 aa5.62□□□□□ -1.51
SOX9-AS1-212ENST00000533232 H7C2G1 150 aa5.62□□□□□ -1.51
SOX9-AS1-212ENST00000533232 INSL3P51460 131 aa5.62□□□□□ -1.51
SOX9-AS1-212ENST00000533232 HERV-K104P63124 156 aa5.62□□□□□ -1.51
SOX9-AS1-212ENST00000533232 LINC01620Q4KN68 170 aa5.62□□□□□ -1.51
SOX9-AS1-212ENST00000533232 C16orf95Q9H693 158 aa5.62□□□□□ -1.51
SOX9-AS1-212ENST00000533232 CSPG4Q6UVK1 2322 aa5.62□□□□□ -1.51
SOX9-AS1-212ENST00000533232 IGHV3OR16-12A0A075B7B8 117 aa5.62□□□□□ -1.51
SOX9-AS1-212ENST00000533232 H3BT86 120 aa5.62□□□□□ -1.51
SOX9-AS1-212ENST00000533232 UBE2L6O14933 153 aa5.62□□□□□ -1.51
SOX9-AS1-212ENST00000533232 RNASE13Q5GAN3 156 aaKnown RBP5.62□□□□□ -1.51
SOX9-AS1-212ENST00000533232 CDKN2A-AS1Q9UH64 79 aa5.62□□□□□ -1.51
SOX9-AS1-212ENST00000533232 ICOSQ9Y6W8 199 aa5.62□□□□□ -1.51
SOX9-AS1-212ENST00000533232 SVEP1Q4LDE5 3571 aa5.61□□□□□ -1.51
SOX9-AS1-212ENST00000533232 IGLV5-39A0A0G2JS06 123 aa5.61□□□□□ -1.51
SOX9-AS1-212ENST00000533232 PRM2P04554 102 aa5.61□□□□□ -1.51
SOX9-AS1-212ENST00000533232 RPL13AP40429 203 aaKnown RBP5.61□□□□□ -1.51
SOX9-AS1-212ENST00000533232 BBC3Q96PG8 261 aaPredicted RBP5.61□□□□□ -1.51
SOX9-AS1-212ENST00000533232 TMEM243Q9BU79 118 aa5.61□□□□□ -1.51
SOX9-AS1-212ENST00000533232 CACNA1AO00555 2505 aa5.61□□□□□ -1.51
SOX9-AS1-212ENST00000533232 NACAE9PAV3 2078 aa5.6□□□□□ -1.51
SOX9-AS1-212ENST00000533232 ANKRD17O75179 2603 aaKnown RBP5.6□□□□□ -1.51
SOX9-AS1-212ENST00000533232 TRBV6-4A0A1B0GX49 114 aa5.6□□□□□ -1.51
SOX9-AS1-212ENST00000533232 TRIAP1O43715 76 aa5.6□□□□□ -1.51
SOX9-AS1-212ENST00000533232 RNASE1P07998 156 aaKnown RBP5.6□□□□□ -1.51
SOX9-AS1-212ENST00000533232 ADAMTSL4-AS1Q5T5F5 129 aa5.6□□□□□ -1.51
SOX9-AS1-212ENST00000533232 LINC00242Q5T6M2 205 aa5.6□□□□□ -1.51
SOX9-AS1-212ENST00000533232 CARD19Q96LW7 228 aa5.6□□□□□ -1.51
SOX9-AS1-212ENST00000533232 A0A1W2PRX2 142 aa5.6□□□□□ -1.51
SOX9-AS1-212ENST00000533232 EIF4EBP3O60516 100 aaPredicted RBP5.6□□□□□ -1.51
SOX9-AS1-212ENST00000533232 OVOL2Q9BRP0 275 aa5.6□□□□□ -1.51
SOX9-AS1-212ENST00000533232 CDIP1Q9H305 208 aa5.6□□□□□ -1.51
SOX9-AS1-212ENST00000533232 CDC42SE2Q9NRR3 84 aa5.6□□□□□ -1.51
SOX9-AS1-212ENST00000533232 Q9UF83 564 aa5.6□□□□□ -1.51
SOX9-AS1-212ENST00000533232 SPG11Q96JI7 2443 aa5.59□□□□□ -1.51
SOX9-AS1-212ENST00000533232 ZFHX3Q15911 3703 aa5.59□□□□□ -1.51
SOX9-AS1-212ENST00000533232 TRGV2A0A075B6R0 118 aa5.59□□□□□ -1.51
SOX9-AS1-212ENST00000533232 C2orf82Q6UX34 121 aa5.59□□□□□ -1.51
SOX9-AS1-212ENST00000533232 Q6ZTI0 123 aa5.59□□□□□ -1.51
SOX9-AS1-212ENST00000533232 UBE2WQ96B02 151 aa5.59□□□□□ -1.51
SOX9-AS1-212ENST00000533232 CITED2Q99967 270 aaPredicted RBP5.59□□□□□ -1.51
SOX9-AS1-212ENST00000533232 Q9H8V8 135 aa5.59□□□□□ -1.51
SOX9-AS1-212ENST00000533232 CELSR1Q9NYQ6 3014 aa5.58□□□□□ -1.52
SOX9-AS1-212ENST00000533232 GAGE12JA6NER3 117 aa5.58□□□□□ -1.52
SOX9-AS1-212ENST00000533232 SMIM1B2RUZ4 78 aa5.58□□□□□ -1.52
SOX9-AS1-212ENST00000533232 LST1O00453 97 aa5.58□□□□□ -1.52
SOX9-AS1-212ENST00000533232 IGLV1-51P01701 117 aa5.58□□□□□ -1.52
SOX9-AS1-212ENST00000533232 PF4P02776 101 aa5.58□□□□□ -1.52
SOX9-AS1-212ENST00000533232 GAGE4Q13068 117 aa5.58□□□□□ -1.52
SOX9-AS1-212ENST00000533232 GAGE5Q13069 117 aa5.58□□□□□ -1.52
SOX9-AS1-212ENST00000533232 MEIG1Q5JSS6 88 aa5.58□□□□□ -1.52
SOX9-AS1-212ENST00000533232 PRIMA1Q86XR5 153 aa5.58□□□□□ -1.52
SOX9-AS1-212ENST00000533232 LINC01006Q8NI28 216 aa5.58□□□□□ -1.52
SOX9-AS1-212ENST00000533232 LINC00308Q8TCZ7 52 aa5.58□□□□□ -1.52
SOX9-AS1-212ENST00000533232 NOP10Q9NPE3 64 aaKnown RBP5.58□□□□□ -1.52
SOX9-AS1-212ENST00000533232 TRAV13-1A0A0B4J241 112 aa5.57□□□□□ -1.52
SOX9-AS1-212ENST00000533232 TRGV4A0A0C4DH28 118 aa5.57□□□□□ -1.52
SOX9-AS1-212ENST00000533232 COX6A2Q02221 97 aa5.57□□□□□ -1.52
SOX9-AS1-212ENST00000533232 KRTAP1-1Q07627 177 aa5.57□□□□□ -1.52
SOX9-AS1-212ENST00000533232 MRPL23Q16540 153 aaKnown RBP5.57□□□□□ -1.52
SOX9-AS1-212ENST00000533232 WFDC11Q8NEX6 87 aa5.57□□□□□ -1.52
SOX9-AS1-212ENST00000533232 NTN5Q8WTR8 489 aaPredicted RBP5.57□□□□□ -1.52
SOX9-AS1-212ENST00000533232 IGSF10Q6WRI0 2623 aa5.57□□□□□ -1.52
SOX9-AS1-212ENST00000533232 TRAV8-4A0A0B4J246 113 aa5.57□□□□□ -1.52
SOX9-AS1-212ENST00000533232 A8MZ25 164 aa5.57□□□□□ -1.52
SOX9-AS1-212ENST00000533232 SNCGO76070 127 aa5.57□□□□□ -1.52
SOX9-AS1-212ENST00000533232 NDUFA7O95182 113 aa5.57□□□□□ -1.52
SOX9-AS1-212ENST00000533232 CKS1BP61024 79 aa5.57□□□□□ -1.52
SOX9-AS1-212ENST00000533232 NTM-AS1Q6ZSK4 140 aa5.57□□□□□ -1.52
SOX9-AS1-212ENST00000533232 C11orf44Q8N8P7 122 aa5.57□□□□□ -1.52
SOX9-AS1-212ENST00000533232 ESM1Q9NQ30 184 aa5.57□□□□□ -1.52
SOX9-AS1-212ENST00000533232 USP9XQ93008 2570 aaPredicted RBP5.56□□□□□ -1.52
SOX9-AS1-212ENST00000533232 COL12A1Q99715 3063 aa5.56□□□□□ -1.52
SOX9-AS1-212ENST00000533232 SORL1Q92673 2214 aa5.56□□□□□ -1.52
SOX9-AS1-212ENST00000533232 TRAV13-2A0A0B4J235 113 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms