RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 IGHV3OR16-9A0A0B4J2B5 98 aa3.91□□□□□ -1.78
HMGB1P42-201ENST00000532126 K7EP13 123 aa3.91□□□□□ -1.78
HMGB1P42-201ENST00000532126 MGPP08493 103 aa3.91□□□□□ -1.78
HMGB1P42-201ENST00000532126 LINC00614P0C842 121 aa3.91□□□□□ -1.78
HMGB1P42-201ENST00000532126 TRGC1P0CF51 173 aa3.91□□□□□ -1.78
HMGB1P42-201ENST00000532126 DNAH10OSP0CZ25 163 aa3.91□□□□□ -1.78
HMGB1P42-201ENST00000532126 LINC00694P0DN24 101 aa3.91□□□□□ -1.78
HMGB1P42-201ENST00000532126 CTRLP40313 264 aa3.91□□□□□ -1.78
HMGB1P42-201ENST00000532126 RPL36AP83881 106 aaKnown RBP3.91□□□□□ -1.78
HMGB1P42-201ENST00000532126 TMEM241Q24JQ0 296 aa3.91□□□□□ -1.78
HMGB1P42-201ENST00000532126 LYZL1Q6UWQ5 148 aa3.91□□□□□ -1.78
HMGB1P42-201ENST00000532126 FAM231DQ6ZW35 169 aa3.91□□□□□ -1.78
HMGB1P42-201ENST00000532126 LINC01551Q86U37 167 aa3.91□□□□□ -1.78
HMGB1P42-201ENST00000532126 C2orf88Q9BSF0 95 aa3.91□□□□□ -1.78
HMGB1P42-201ENST00000532126 SMDT1Q9H4I9 107 aa3.91□□□□□ -1.78
HMGB1P42-201ENST00000532126 KIF25-AS1Q9Y6Z4 181 aa3.91□□□□□ -1.78
HMGB1P42-201ENST00000532126 A8MWL6 223 aa3.9□□□□□ -1.79
HMGB1P42-201ENST00000532126 C9JQL5 133 aa3.9□□□□□ -1.79
HMGB1P42-201ENST00000532126 H7C1H1 209 aa3.9□□□□□ -1.79
HMGB1P42-201ENST00000532126 NTF3P20783 257 aa3.9□□□□□ -1.79
HMGB1P42-201ENST00000532126 LINC00315P59091 139 aa3.9□□□□□ -1.79
HMGB1P42-201ENST00000532126 UBE2D3P61077 147 aa3.9□□□□□ -1.79
HMGB1P42-201ENST00000532126 UBE2D2P62837 147 aa3.9□□□□□ -1.79
HMGB1P42-201ENST00000532126 LINC01556Q5JQF7 62 aa3.9□□□□□ -1.79
HMGB1P42-201ENST00000532126 Q6ZVH6 145 aa3.9□□□□□ -1.79
HMGB1P42-201ENST00000532126 C10orf126Q8N4M7 172 aa3.9□□□□□ -1.79
HMGB1P42-201ENST00000532126 GTSF1Q8WW33 167 aa3.9□□□□□ -1.79
HMGB1P42-201ENST00000532126 BORCS7Q96B45 105 aa3.9□□□□□ -1.79
HMGB1P42-201ENST00000532126 CHCHD5Q9BSY4 110 aa3.9□□□□□ -1.79
HMGB1P42-201ENST00000532126 DNAH6Q9C0G6 4158 aa3.9□□□□□ -1.79
HMGB1P42-201ENST00000532126 NACAE9PAV3 2078 aa3.9□□□□□ -1.79
HMGB1P42-201ENST00000532126 BIRC6Q9NR09 4857 aa3.89□□□□□ -1.79
HMGB1P42-201ENST00000532126 A0A1B0GVY2 172 aa3.89□□□□□ -1.79
HMGB1P42-201ENST00000532126 M0QY20 66 aa3.89□□□□□ -1.79
HMGB1P42-201ENST00000532126 IGHV3-30P01768 117 aa3.89□□□□□ -1.79
HMGB1P42-201ENST00000532126 IGHV3-33P01772 117 aa3.89□□□□□ -1.79
HMGB1P42-201ENST00000532126 IGHV3-30-3P0DP02 117 aa3.89□□□□□ -1.79
HMGB1P42-201ENST00000532126 IGHV3-30-5P0DP03 117 aa3.89□□□□□ -1.79
HMGB1P42-201ENST00000532126 AKR1D1P51857 326 aa3.89□□□□□ -1.79
HMGB1P42-201ENST00000532126 RPL23P62829 140 aaKnown RBP3.89□□□□□ -1.79
HMGB1P42-201ENST00000532126 ADIRFQ15847 76 aa3.89□□□□□ -1.79
HMGB1P42-201ENST00000532126 ADAMTSL4-AS1Q5T5F5 129 aa3.89□□□□□ -1.79
HMGB1P42-201ENST00000532126 TEX43Q6ZNM6 134 aa3.89□□□□□ -1.79
HMGB1P42-201ENST00000532126 TSKUQ8WUA8 353 aa3.89□□□□□ -1.79
HMGB1P42-201ENST00000532126 CNFNQ9BYD5 112 aa3.89□□□□□ -1.79
HMGB1P42-201ENST00000532126 DPH3P1Q9H4G8 78 aa3.89□□□□□ -1.79
HMGB1P42-201ENST00000532126 OSTCQ9NRP0 149 aa3.89□□□□□ -1.79
HMGB1P42-201ENST00000532126 NAT8Q9UHE5 227 aa3.89□□□□□ -1.79
HMGB1P42-201ENST00000532126 RPL37AP8A6NKH3 93 aa3.88□□□□□ -1.79
HMGB1P42-201ENST00000532126 HIGD1CA8MV81 97 aa3.88□□□□□ -1.79
HMGB1P42-201ENST00000532126 FOXA3P55318 350 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P42-201ENST00000532126 COA6Q5JTJ3 125 aaKnown RBP3.88□□□□□ -1.79
HMGB1P42-201ENST00000532126 RASL11AQ6T310 242 aa3.88□□□□□ -1.79
HMGB1P42-201ENST00000532126 C2orf66Q6UXQ4 117 aa3.88□□□□□ -1.79
HMGB1P42-201ENST00000532126 DAZ4Q86SG3 579 aaKnown RBP3.88□□□□□ -1.79
HMGB1P42-201ENST00000532126 NKAPP1Q8N9T2 125 aa3.88□□□□□ -1.79
HMGB1P42-201ENST00000532126 GATD1Q8NB37 220 aa3.88□□□□□ -1.79
HMGB1P42-201ENST00000532126 DNAJC30Q96LL9 226 aa3.88□□□□□ -1.79
HMGB1P42-201ENST00000532126 GFRA4Q9GZZ7 299 aa3.88□□□□□ -1.79
HMGB1P42-201ENST00000532126 DAZ3Q9NR90 486 aaKnown RBP3.88□□□□□ -1.79
HMGB1P42-201ENST00000532126 V9GYV3 84 aa3.88□□□□□ -1.79
HMGB1P42-201ENST00000532126 A0A087WX48 190 aa3.87□□□□□ -1.79
HMGB1P42-201ENST00000532126 TRBV6-8A0A0A6YYG3 113 aa3.87□□□□□ -1.79
HMGB1P42-201ENST00000532126 A0A1B0GUT8 65 aa3.87□□□□□ -1.79
HMGB1P42-201ENST00000532126 A0A1B0GV72 72 aa3.87□□□□□ -1.79
HMGB1P42-201ENST00000532126 A0A1B0GV90 55 aa3.87□□□□□ -1.79
HMGB1P42-201ENST00000532126 IBA57-AS1B1ANH7 110 aa3.87□□□□□ -1.79
HMGB1P42-201ENST00000532126 PSCAO43653 123 aa3.87□□□□□ -1.79
HMGB1P42-201ENST00000532126 PSMB2P49721 201 aa3.87□□□□□ -1.79
HMGB1P42-201ENST00000532126 PRR3P79522 188 aaKnown RBP3.87□□□□□ -1.79
HMGB1P42-201ENST00000532126 PRR4Q16378 134 aa3.87□□□□□ -1.79
HMGB1P42-201ENST00000532126 C4orf26Q17RF5 130 aa3.87□□□□□ -1.79
HMGB1P42-201ENST00000532126 TMEM97Q5BJF2 176 aa3.87□□□□□ -1.79
HMGB1P42-201ENST00000532126 CLLU1Q5K131 121 aa3.87□□□□□ -1.79
HMGB1P42-201ENST00000532126 Q6ZRN7 208 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P42-201ENST00000532126 NIT2Q9NQR4 276 aa3.87□□□□□ -1.79
HMGB1P42-201ENST00000532126 NAT8BQ9UHF3 227 aa3.87□□□□□ -1.79
HMGB1P42-201ENST00000532126 DNAH10Q8IVF4 4471 aa3.86□□□□□ -1.79
HMGB1P42-201ENST00000532126 TRBV25-1A0A075B6N4 114 aa3.86□□□□□ -1.79
HMGB1P42-201ENST00000532126 TRAV8-3A0A0A6YYJ7 113 aa3.86□□□□□ -1.79
HMGB1P42-201ENST00000532126 TRAV26-2A0A0B4J265 109 aa3.86□□□□□ -1.79
HMGB1P42-201ENST00000532126 TMEM262E9PQX1 116 aa3.86□□□□□ -1.79
HMGB1P42-201ENST00000532126 PKIAP61925 76 aa3.86□□□□□ -1.79
HMGB1P42-201ENST00000532126 ELOBQ15370 118 aa3.86□□□□□ -1.79
HMGB1P42-201ENST00000532126 SPATA12Q7Z6I5 190 aa3.86□□□□□ -1.79
HMGB1P42-201ENST00000532126 NUP35Q8NFH5 326 aa3.86□□□□□ -1.79
HMGB1P42-201ENST00000532126 FRZBQ92765 325 aa3.86□□□□□ -1.79
HMGB1P42-201ENST00000532126 BTF3L4Q96K17 158 aa3.86□□□□□ -1.79
HMGB1P42-201ENST00000532126 CHCHD7Q9BUK0 85 aa3.86□□□□□ -1.79
HMGB1P42-201ENST00000532126 FRAS1Q86XX4 4008 aa3.86□□□□□ -1.79
HMGB1P42-201ENST00000532126 DNAH2Q9P225 4427 aa3.85□□□□□ -1.79
HMGB1P42-201ENST00000532126 IGHV1-24A0A0C4DH33 117 aa3.85□□□□□ -1.79
HMGB1P42-201ENST00000532126 A0A0U1RQV1 116 aa3.85□□□□□ -1.79
HMGB1P42-201ENST00000532126 SMIM27A0A1W2PRY6 76 aa3.85□□□□□ -1.79
HMGB1P42-201ENST00000532126 C16orf90A8MZG2 172 aa3.85□□□□□ -1.79
HMGB1P42-201ENST00000532126 H0Y9J4 135 aa3.85□□□□□ -1.79
HMGB1P42-201ENST00000532126 SCO1O75880 301 aa3.85□□□□□ -1.79
HMGB1P42-201ENST00000532126 KIAA0087Q14695 138 aa3.85□□□□□ -1.79
HMGB1P42-201ENST00000532126 IQCJQ1A5X6 159 aa3.85□□□□□ -1.79
HMGB1P42-201ENST00000532126 LCE1DQ5T752 114 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms