RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 TRGV1A0A0A0MS02 117 aa1.29□□□□□ -2.2
USP47-211ENST00000531513 CTXND1A0A1B0GTU2 59 aa1.29□□□□□ -2.2
USP47-211ENST00000531513 IGLC7A0M8Q6 106 aa1.29□□□□□ -2.2
USP47-211ENST00000531513 SYS1-DBNDD2H3BUS1 97 aa1.29□□□□□ -2.2
USP47-211ENST00000531513 SAA2P0DJI9 122 aaPredicted RBP1.29□□□□□ -2.2
USP47-211ENST00000531513 COX17Q14061 63 aa1.29□□□□□ -2.2
USP47-211ENST00000531513 SMIM11BQ8TCY0 68 aa1.29□□□□□ -2.2
USP47-211ENST00000531513 BPESC1Q9GZL8 116 aa1.29□□□□□ -2.2
USP47-211ENST00000531513 NXT2Q9NPJ8 142 aaKnown RBP1.29□□□□□ -2.2
USP47-211ENST00000531513 RABAC1Q9UI14 185 aa1.29□□□□□ -2.2
USP47-211ENST00000531513 LINC01558Q9Y6Z2 57 aa1.29□□□□□ -2.2
USP47-211ENST00000531513 ASCC3Q8N3C0 2202 aaKnown RBP1.29□□□□□ -2.2
USP47-211ENST00000531513 SHANK2Q9UPX8 1470 aa1.29□□□□□ -2.2
USP47-211ENST00000531513 ARHGEF12Q9NZN5 1544 aa1.29□□□□□ -2.2
USP47-211ENST00000531513 KIAA1551Q9HCM1 1747 aa1.29□□□□□ -2.2
USP47-211ENST00000531513 TRAV1-2A0A0B4J238 106 aa1.28□□□□□ -2.2
USP47-211ENST00000531513 K7EP34 96 aa1.28□□□□□ -2.2
USP47-211ENST00000531513 BCE1O60756 84 aa1.28□□□□□ -2.2
USP47-211ENST00000531513 UQCRHP07919 91 aa1.28□□□□□ -2.2
USP47-211ENST00000531513 RPL37P61927 97 aaKnown RBP1.28□□□□□ -2.2
USP47-211ENST00000531513 PMCHL1Q16048 86 aa1.28□□□□□ -2.2
USP47-211ENST00000531513 PRO1933Q9H354 126 aa1.28□□□□□ -2.2
USP47-211ENST00000531513 UACAQ9BZF9 1416 aa1.28□□□□□ -2.2
USP47-211ENST00000531513 EPRSP07814 1512 aaKnown RBP1.28□□□□□ -2.2
USP47-211ENST00000531513 MYOM1P52179 1685 aa1.28□□□□□ -2.2
USP47-211ENST00000531513 PARP14Q460N5 1801 aa1.28□□□□□ -2.2
USP47-211ENST00000531513 PLXNA1Q9UIW2 1896 aa1.28□□□□□ -2.2
USP47-211ENST00000531513 KIAA0100Q14667 2235 aaKnown RBP1.27□□□□□ -2.21
USP47-211ENST00000531513 DOCK1Q14185 1865 aa1.27□□□□□ -2.21
USP47-211ENST00000531513 PLIN4Q96Q06 1357 aa1.27□□□□□ -2.21
USP47-211ENST00000531513 TRBV25-1A0A075B6N4 114 aa1.27□□□□□ -2.21
USP47-211ENST00000531513 H7BZZ5 65 aa1.27□□□□□ -2.21
USP47-211ENST00000531513 SMIM11AP58511 58 aa1.27□□□□□ -2.21
USP47-211ENST00000531513 ARL2-SNX15V9GYD0 113 aa1.27□□□□□ -2.21
USP47-211ENST00000531513 LAMA4Q16363 1823 aa1.26□□□□□ -2.21
USP47-211ENST00000531513 DOCK2Q92608 1830 aa1.26□□□□□ -2.21
USP47-211ENST00000531513 CHD1O14646 1710 aa1.26□□□□□ -2.21
USP47-211ENST00000531513 TET3O43151 1660 aa1.26□□□□□ -2.21
USP47-211ENST00000531513 CDK13Q14004 1512 aaKnown RBP1.26□□□□□ -2.21
USP47-211ENST00000531513 EHBP1L1Q8N3D4 1523 aa1.26□□□□□ -2.21
USP47-211ENST00000531513 FANCAO15360 1455 aa1.26□□□□□ -2.21
USP47-211ENST00000531513 A0A0G2JND7 137 aa1.26□□□□□ -2.21
USP47-211ENST00000531513 K7EIL1 84 aa1.26□□□□□ -2.21
USP47-211ENST00000531513 CYB5AP00167 134 aa1.26□□□□□ -2.21
USP47-211ENST00000531513 MGPP08493 103 aa1.26□□□□□ -2.21
USP47-211ENST00000531513 UNC13BO14795 1591 aa1.25□□□□□ -2.21
USP47-211ENST00000531513 MED12Q93074 2177 aa1.25□□□□□ -2.21
USP47-211ENST00000531513 HMGXB3Q12766 1538 aa1.25□□□□□ -2.21
USP47-211ENST00000531513 ATP10BO94823 1461 aa1.25□□□□□ -2.21
USP47-211ENST00000531513 IQSEC2Q5JU85 1478 aa1.25□□□□□ -2.21
USP47-211ENST00000531513 CEP162Q5TB80 1403 aa1.25□□□□□ -2.21
USP47-211ENST00000531513 GVQW2A0A096LPI5 108 aaPredicted RBP1.25□□□□□ -2.21
USP47-211ENST00000531513 PIN1P1O15428 100 aa1.25□□□□□ -2.21
USP47-211ENST00000531513 PEA15Q15121 130 aa1.25□□□□□ -2.21
USP47-211ENST00000531513 SFTA2Q6UW10 78 aa1.25□□□□□ -2.21
USP47-211ENST00000531513 S100A16Q96FQ6 103 aaKnown RBP1.25□□□□□ -2.21
USP47-211ENST00000531513 C20orf78Q9BR46 151 aa1.25□□□□□ -2.21
USP47-211ENST00000531513 SIPA1L3O60292 1781 aaPredicted RBP1.25□□□□□ -2.21
USP47-211ENST00000531513 ARHGAP35Q9NRY4 1499 aa1.24□□□□□ -2.21
USP47-211ENST00000531513 A0A1B0GWA3 101 aa1.24□□□□□ -2.21
USP47-211ENST00000531513 LY6G6CO95867 125 aa1.24□□□□□ -2.21
USP47-211ENST00000531513 GCHFRP30047 84 aa1.24□□□□□ -2.21
USP47-211ENST00000531513 CFAP126Q5VTH2 177 aa1.24□□□□□ -2.21
USP47-211ENST00000531513 Q6ZRX8 168 aa1.24□□□□□ -2.21
USP47-211ENST00000531513 ZNF720Q7Z2F6 126 aa1.24□□□□□ -2.21
USP47-211ENST00000531513 FAM223AQ8IWN6 122 aa1.24□□□□□ -2.21
USP47-211ENST00000531513 ZMYM4Q5VZL5 1548 aa1.24□□□□□ -2.21
USP47-211ENST00000531513 ABCC2Q92887 1545 aa1.24□□□□□ -2.21
USP47-211ENST00000531513 TENM1Q9UKZ4 2725 aa1.24□□□□□ -2.21
USP47-211ENST00000531513 PRDM2Q13029 1718 aa1.23□□□□□ -2.21
USP47-211ENST00000531513 TOP2BQ02880 1626 aa1.23□□□□□ -2.21
USP47-211ENST00000531513 ZNF815PA8K554 130 aa1.23□□□□□ -2.21
USP47-211ENST00000531513 SPINT3P49223 89 aa1.23□□□□□ -2.21
USP47-211ENST00000531513 ZNF137PP52743 207 aa1.23□□□□□ -2.21
USP47-211ENST00000531513 HMGN3Q15651 99 aa1.23□□□□□ -2.21
USP47-211ENST00000531513 PSMG4Q5JS54 123 aa1.23□□□□□ -2.21
USP47-211ENST00000531513 S100A13Q99584 98 aa1.23□□□□□ -2.21
USP47-211ENST00000531513 PRR15LQ9BU68 103 aa1.23□□□□□ -2.21
USP47-211ENST00000531513 TANC1Q9C0D5 1861 aa1.22□□□□□ -2.21
USP47-211ENST00000531513 ABCA4P78363 2273 aa1.22□□□□□ -2.21
USP47-211ENST00000531513 FAM223BA6NKX1 122 aa1.22□□□□□ -2.21
USP47-211ENST00000531513 PROK2Q9HC23 129 aa1.22□□□□□ -2.21
USP47-211ENST00000531513 EDC4Q6P2E9 1401 aaKnown RBP1.22□□□□□ -2.21
USP47-211ENST00000531513 ARFGEF1Q9Y6D6 1849 aa1.22□□□□□ -2.21
USP47-211ENST00000531513 KDM5AP29375 1690 aaKnown RBP1.21□□□□□ -2.22
USP47-211ENST00000531513 SPINK9Q5DT21 86 aa1.21□□□□□ -2.22
USP47-211ENST00000531513 ALKAL2Q6UX46 152 aa1.21□□□□□ -2.22
USP47-211ENST00000531513 LINC00846Q9NV44 126 aa1.21□□□□□ -2.22
USP47-211ENST00000531513 PSME4Q14997 1843 aa1.2□□□□□ -2.22
USP47-211ENST00000531513 MAGI2Q86UL8 1455 aa1.2□□□□□ -2.22
USP47-211ENST00000531513 NMBP08949 121 aa1.2□□□□□ -2.22
USP47-211ENST00000531513 SPTBP11277 2137 aa1.2□□□□□ -2.22
USP47-211ENST00000531513 TMEM263Q8WUH6 116 aaKnown RBP1.2□□□□□ -2.22
USP47-211ENST00000531513 SPRR4Q96PI1 79 aa1.2□□□□□ -2.22
USP47-211ENST00000531513 LOC285556D6RIA3 1793 aa1.2□□□□□ -2.22
USP47-211ENST00000531513 ARHGEF5Q12774 1597 aa1.2□□□□□ -2.22
USP47-211ENST00000531513 CLTCQ00610 1675 aaKnown RBP1.2□□□□□ -2.22
USP47-211ENST00000531513 COL4A6Q14031 1691 aa1.2□□□□□ -2.22
USP47-211ENST00000531513 RAPGEF6Q8TEU7 1601 aa1.19□□□□□ -2.22
USP47-211ENST00000531513 TCHHQ07283 1943 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms