RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-208ENST00000528865 FAM110AQ9BQ89 295 aa5.98□□□□□ -1.45
CSTF3-208ENST00000528865 CDC42SE2Q9NRR3 84 aa5.98□□□□□ -1.45
CSTF3-208ENST00000528865 TRGV1A0A0A0MS02 117 aa5.97□□□□□ -1.45
CSTF3-208ENST00000528865 F5H768 121 aa5.97□□□□□ -1.45
CSTF3-208ENST00000528865 K7EQD1 137 aa5.97□□□□□ -1.45
CSTF3-208ENST00000528865 LST1O00453 97 aa5.97□□□□□ -1.45
CSTF3-208ENST00000528865 PRB1P04280 392 aa5.97□□□□□ -1.45
CSTF3-208ENST00000528865 GIG44P09565 113 aaPredicted RBP5.97□□□□□ -1.45
CSTF3-208ENST00000528865 LINC00694P0DN24 101 aa5.97□□□□□ -1.45
CSTF3-208ENST00000528865 KHDC1LQ5JSQ8 128 aa5.97□□□□□ -1.45
CSTF3-208ENST00000528865 NTN5Q8WTR8 489 aaPredicted RBP5.97□□□□□ -1.45
CSTF3-208ENST00000528865 COPS9Q8WXC6 57 aa5.97□□□□□ -1.45
CSTF3-208ENST00000528865 CITED2Q99967 270 aaPredicted RBP5.97□□□□□ -1.45
CSTF3-208ENST00000528865 OVOL2Q9BRP0 275 aa5.97□□□□□ -1.45
CSTF3-208ENST00000528865 C16orf95Q9H693 158 aa5.97□□□□□ -1.45
CSTF3-208ENST00000528865 SVEP1Q4LDE5 3571 aa5.97□□□□□ -1.45
CSTF3-208ENST00000528865 SPTBN4Q9H254 2564 aa5.97□□□□□ -1.45
CSTF3-208ENST00000528865 PKD1L2Q7Z442 2459 aa5.96□□□□□ -1.46
CSTF3-208ENST00000528865 SMIM1B2RUZ4 78 aa5.96□□□□□ -1.46
CSTF3-208ENST00000528865 HERV-K104P63124 156 aa5.96□□□□□ -1.46
CSTF3-208ENST00000528865 SHISA2Q6UWI4 295 aa5.96□□□□□ -1.46
CSTF3-208ENST00000528865 C2orf82Q6UX34 121 aa5.96□□□□□ -1.46
CSTF3-208ENST00000528865 ZNF625Q96I27 306 aaPredicted RBP5.96□□□□□ -1.46
CSTF3-208ENST00000528865 ZFHX3Q15911 3703 aa5.96□□□□□ -1.46
CSTF3-208ENST00000528865 PLAC8L1A1L4L8 177 aa5.95□□□□□ -1.46
CSTF3-208ENST00000528865 DNAJC9-AS1A6NH13 148 aa5.95□□□□□ -1.46
CSTF3-208ENST00000528865 MRPL23Q16540 153 aaKnown RBP5.95□□□□□ -1.46
CSTF3-208ENST00000528865 Q6Q795 121 aa5.95□□□□□ -1.46
CSTF3-208ENST00000528865 Q6ZTI0 123 aa5.95□□□□□ -1.46
CSTF3-208ENST00000528865 UBE2WQ96B02 151 aa5.95□□□□□ -1.46
CSTF3-208ENST00000528865 Q9H8V8 135 aa5.95□□□□□ -1.46
CSTF3-208ENST00000528865 C19orf73Q9NVV2 129 aa5.95□□□□□ -1.46
CSTF3-208ENST00000528865 TRAV8-4A0A0B4J246 113 aa5.94□□□□□ -1.46
CSTF3-208ENST00000528865 TRBV6-4A0A1B0GX49 114 aa5.94□□□□□ -1.46
CSTF3-208ENST00000528865 SOSTDC1Q6X4U4 206 aa5.94□□□□□ -1.46
CSTF3-208ENST00000528865 CSNK1G2-AS1Q8NCQ2 148 aa5.94□□□□□ -1.46
CSTF3-208ENST00000528865 C16orf74Q96GX8 76 aa5.94□□□□□ -1.46
CSTF3-208ENST00000528865 ESM1Q9NQ30 184 aa5.94□□□□□ -1.46
CSTF3-208ENST00000528865 TEX49A0A1B0GTD5 131 aa5.93□□□□□ -1.46
CSTF3-208ENST00000528865 GAGE12JA6NER3 117 aa5.93□□□□□ -1.46
CSTF3-208ENST00000528865 COX7A2LO14548 114 aa5.93□□□□□ -1.46
CSTF3-208ENST00000528865 IGLV1-51P01701 117 aa5.93□□□□□ -1.46
CSTF3-208ENST00000528865 NPC2P61916 151 aa5.93□□□□□ -1.46
CSTF3-208ENST00000528865 GAGE4Q13068 117 aa5.93□□□□□ -1.46
CSTF3-208ENST00000528865 GAGE5Q13069 117 aa5.93□□□□□ -1.46
CSTF3-208ENST00000528865 HIST2H2BDQ6DRA6 164 aa5.93□□□□□ -1.46
CSTF3-208ENST00000528865 CLEC2BQ92478 149 aa5.93□□□□□ -1.46
CSTF3-208ENST00000528865 TMEM243Q9BU79 118 aa5.93□□□□□ -1.46
CSTF3-208ENST00000528865 NOP10Q9NPE3 64 aaKnown RBP5.93□□□□□ -1.46
CSTF3-208ENST00000528865 CHD8Q9HCK8 2581 aa5.92□□□□□ -1.46
CSTF3-208ENST00000528865 TRAV13-1A0A0B4J241 112 aa5.92□□□□□ -1.46
CSTF3-208ENST00000528865 FAM240AA0A1B0GVK7 77 aa5.92□□□□□ -1.46
CSTF3-208ENST00000528865 NDUFA7O95182 113 aa5.92□□□□□ -1.46
CSTF3-208ENST00000528865 RNASE1P07998 156 aaKnown RBP5.92□□□□□ -1.46
CSTF3-208ENST00000528865 DAND5Q8N907 189 aa5.92□□□□□ -1.46
CSTF3-208ENST00000528865 CREBBPQ92793 2442 aa5.91□□□□□ -1.46
CSTF3-208ENST00000528865 TRACP01848 142 aa5.91□□□□□ -1.46
CSTF3-208ENST00000528865 PF4P02776 101 aa5.91□□□□□ -1.46
CSTF3-208ENST00000528865 FHL2Q14192 279 aa5.91□□□□□ -1.46
CSTF3-208ENST00000528865 FAM222AQ5U5X8 452 aa5.91□□□□□ -1.46
CSTF3-208ENST00000528865 WFDC11Q8NEX6 87 aa5.91□□□□□ -1.46
CSTF3-208ENST00000528865 LINC01006Q8NI28 216 aa5.91□□□□□ -1.46
CSTF3-208ENST00000528865 CACNA1AO00555 2505 aa5.9□□□□□ -1.46
CSTF3-208ENST00000528865 USP9XQ93008 2570 aaPredicted RBP5.9□□□□□ -1.46
CSTF3-208ENST00000528865 A0A1W2PRX2 142 aa5.9□□□□□ -1.46
CSTF3-208ENST00000528865 UBE2L6O14933 153 aa5.9□□□□□ -1.46
CSTF3-208ENST00000528865 KRTAP1-1Q07627 177 aa5.9□□□□□ -1.46
CSTF3-208ENST00000528865 GAGE2BQ13066 116 aa5.9□□□□□ -1.46
CSTF3-208ENST00000528865 GAGE2EQ4V326 116 aa5.9□□□□□ -1.46
CSTF3-208ENST00000528865 MEIG1Q5JSS6 88 aa5.9□□□□□ -1.46
CSTF3-208ENST00000528865 PRIMA1Q86XR5 153 aa5.9□□□□□ -1.46
CSTF3-208ENST00000528865 LINC00612Q8N6U2 182 aa5.9□□□□□ -1.46
CSTF3-208ENST00000528865 GAGE2DQ9UEU5 116 aa5.9□□□□□ -1.46
CSTF3-208ENST00000528865 PIEZO1Q92508 2521 aa5.9□□□□□ -1.47
CSTF3-208ENST00000528865 CRLF1O75462 422 aa5.89□□□□□ -1.47
CSTF3-208ENST00000528865 SNCGO76070 127 aa5.89□□□□□ -1.47
CSTF3-208ENST00000528865 GAGE7O76087 117 aa5.89□□□□□ -1.47
CSTF3-208ENST00000528865 GAGE12FP0CL80 117 aa5.89□□□□□ -1.47
CSTF3-208ENST00000528865 GAGE12GP0CL81 117 aa5.89□□□□□ -1.47
CSTF3-208ENST00000528865 GAGE12IP0CL82 117 aa5.89□□□□□ -1.47
CSTF3-208ENST00000528865 RPL28P46779 137 aaKnown RBP5.89□□□□□ -1.47
CSTF3-208ENST00000528865 C11orf44Q8N8P7 122 aa5.89□□□□□ -1.47
CSTF3-208ENST00000528865 C15orf53Q8NAA6 179 aa5.89□□□□□ -1.47
CSTF3-208ENST00000528865 COX7B2Q8TF08 81 aa5.89□□□□□ -1.47
CSTF3-208ENST00000528865 USP9YO00507 2555 aaPredicted RBP5.89□□□□□ -1.47
CSTF3-208ENST00000528865 TRGV2A0A075B6R0 118 aa5.88□□□□□ -1.47
CSTF3-208ENST00000528865 TRAV26-1A0A087WT03 109 aa5.88□□□□□ -1.47
CSTF3-208ENST00000528865 TRBV6-8A0A0A6YYG3 113 aa5.88□□□□□ -1.47
CSTF3-208ENST00000528865 TRAV13-2A0A0B4J235 113 aa5.88□□□□□ -1.47
CSTF3-208ENST00000528865 IGHV3OR16-9A0A0B4J2B5 98 aa5.88□□□□□ -1.47
CSTF3-208ENST00000528865 LOC100131303A0A0U1RQF7 123 aa5.88□□□□□ -1.47
CSTF3-208ENST00000528865 ACYP1P07311 99 aa5.88□□□□□ -1.47
CSTF3-208ENST00000528865 NHLRC4P0CG21 123 aaPredicted RBP5.88□□□□□ -1.47
CSTF3-208ENST00000528865 HIST2H2BCQ6DN03 193 aa5.88□□□□□ -1.47
CSTF3-208ENST00000528865 KIR2DL5BQ8NHK3 375 aa5.88□□□□□ -1.47
CSTF3-208ENST00000528865 A0A087WZ39 114 aa5.87□□□□□ -1.47
CSTF3-208ENST00000528865 TRGV4A0A0C4DH28 118 aa5.87□□□□□ -1.47
CSTF3-208ENST00000528865 A0A0U1RRA0 63 aa5.87□□□□□ -1.47
CSTF3-208ENST00000528865 RPL35AP18077 110 aaKnown RBP5.87□□□□□ -1.47
CSTF3-208ENST00000528865 GAGE6Q13070 117 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 188.4 ms