RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 LINC01620Q4KN68 170 aa8.41□□□□□ -1.06
LINC01001-201ENST00000526704 NPC2P61916 151 aa8.4□□□□□ -1.06
LINC01001-201ENST00000526704 USP24Q9UPU5 2620 aa8.4□□□□□ -1.06
LINC01001-201ENST00000526704 IGLV5-45A0A087WSX0 123 aa8.4□□□□□ -1.07
LINC01001-201ENST00000526704 ODF3L2Q3SX64 289 aa8.4□□□□□ -1.07
LINC01001-201ENST00000526704 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.4□□□□□ -1.07
LINC01001-201ENST00000526704 FAM110AQ9BQ89 295 aa8.4□□□□□ -1.07
LINC01001-201ENST00000526704 CDKN2A-AS1Q9UH64 79 aa8.4□□□□□ -1.07
LINC01001-201ENST00000526704 WNK1Q9H4A3 2382 aa8.4□□□□□ -1.07
LINC01001-201ENST00000526704 NAV2Q8IVL1 2488 aa8.39□□□□□ -1.07
LINC01001-201ENST00000526704 Q6ZSV7 163 aa8.39□□□□□ -1.07
LINC01001-201ENST00000526704 XCL2Q9UBD3 114 aa8.39□□□□□ -1.07
LINC01001-201ENST00000526704 ICOSQ9Y6W8 199 aa8.39□□□□□ -1.07
LINC01001-201ENST00000526704 GAGE2BQ13066 116 aa8.39□□□□□ -1.07
LINC01001-201ENST00000526704 GAGE2EQ4V326 116 aa8.39□□□□□ -1.07
LINC01001-201ENST00000526704 IL17DQ8TAD2 202 aa8.39□□□□□ -1.07
LINC01001-201ENST00000526704 LINC01600Q96MT4 127 aa8.39□□□□□ -1.07
LINC01001-201ENST00000526704 GAGE2DQ9UEU5 116 aa8.39□□□□□ -1.07
LINC01001-201ENST00000526704 GAGE12JA6NER3 117 aa8.38□□□□□ -1.07
LINC01001-201ENST00000526704 GAGE7O76087 117 aa8.38□□□□□ -1.07
LINC01001-201ENST00000526704 GAGE12FP0CL80 117 aa8.38□□□□□ -1.07
LINC01001-201ENST00000526704 GAGE12GP0CL81 117 aa8.38□□□□□ -1.07
LINC01001-201ENST00000526704 GAGE12IP0CL82 117 aa8.38□□□□□ -1.07
LINC01001-201ENST00000526704 TIRAPP58753 221 aa8.38□□□□□ -1.07
LINC01001-201ENST00000526704 GAGE4Q13068 117 aa8.38□□□□□ -1.07
LINC01001-201ENST00000526704 TLN2Q9Y4G6 2542 aa8.38□□□□□ -1.07
LINC01001-201ENST00000526704 TIMM17BO60830 172 aa8.38□□□□□ -1.07
LINC01001-201ENST00000526704 NDUFV3P56181 108 aaKnown RBP8.38□□□□□ -1.07
LINC01001-201ENST00000526704 COX6A2Q02221 97 aa8.38□□□□□ -1.07
LINC01001-201ENST00000526704 EPG5Q9HCE0 2579 aa8.37□□□□□ -1.07
LINC01001-201ENST00000526704 IGHV3OR16-12A0A075B7B8 117 aa8.37□□□□□ -1.07
LINC01001-201ENST00000526704 NDUFA1O15239 70 aa8.37□□□□□ -1.07
LINC01001-201ENST00000526704 DEFB113Q30KQ7 82 aa8.37□□□□□ -1.07
LINC01001-201ENST00000526704 C1orf158Q8N1D5 194 aa8.37□□□□□ -1.07
LINC01001-201ENST00000526704 NTN5Q8WTR8 489 aaPredicted RBP8.37□□□□□ -1.07
LINC01001-201ENST00000526704 TMEM101Q96IK0 257 aa8.37□□□□□ -1.07
LINC01001-201ENST00000526704 TRBV10-2A0A0K0K1G8 114 aa8.37□□□□□ -1.07
LINC01001-201ENST00000526704 SNCGO76070 127 aa8.37□□□□□ -1.07
LINC01001-201ENST00000526704 SHISA2Q6UWI4 295 aa8.37□□□□□ -1.07
LINC01001-201ENST00000526704 DAND5Q8N907 189 aa8.37□□□□□ -1.07
LINC01001-201ENST00000526704 Q96MF0 132 aa8.36□□□□□ -1.07
LINC01001-201ENST00000526704 YAE1D1Q9NRH1 226 aa8.36□□□□□ -1.07
LINC01001-201ENST00000526704 LINC00694P0DN24 101 aa8.36□□□□□ -1.07
LINC01001-201ENST00000526704 HERV-K104P63124 156 aa8.36□□□□□ -1.07
LINC01001-201ENST00000526704 TTC32Q5I0X7 151 aa8.36□□□□□ -1.07
LINC01001-201ENST00000526704 Q6Q795 121 aa8.36□□□□□ -1.07
LINC01001-201ENST00000526704 NBPF19A0A087WUL8 3843 aa8.36□□□□□ -1.07
LINC01001-201ENST00000526704 TRGV1A0A0A0MS02 117 aa8.35□□□□□ -1.07
LINC01001-201ENST00000526704 IGLV5-39A0A0G2JS06 123 aa8.35□□□□□ -1.07
LINC01001-201ENST00000526704 IFITM1P13164 125 aa8.35□□□□□ -1.07
LINC01001-201ENST00000526704 DGAT2L7PQ6IED9 249 aa8.35□□□□□ -1.07
LINC01001-201ENST00000526704 STHQ8IWL8 128 aa8.35□□□□□ -1.07
LINC01001-201ENST00000526704 ITPR3Q14573 2671 aa8.35□□□□□ -1.07
LINC01001-201ENST00000526704 TEX49A0A1B0GTD5 131 aa8.35□□□□□ -1.07
LINC01001-201ENST00000526704 RPL13AP40429 203 aaKnown RBP8.35□□□□□ -1.07
LINC01001-201ENST00000526704 LINC00242Q5T6M2 205 aa8.35□□□□□ -1.07
LINC01001-201ENST00000526704 KRTAP1-3Q8IUG1 177 aa8.35□□□□□ -1.07
LINC01001-201ENST00000526704 BBC3Q96PG8 261 aaPredicted RBP8.35□□□□□ -1.07
LINC01001-201ENST00000526704 CUBNO60494 3623 aa8.34□□□□□ -1.07
LINC01001-201ENST00000526704 CCDC179H3BU77 68 aa8.34□□□□□ -1.07
LINC01001-201ENST00000526704 FAM19A3Q7Z5A8 133 aa8.34□□□□□ -1.07
LINC01001-201ENST00000526704 LRRC75A-AS1Q8N1F1 130 aa8.34□□□□□ -1.07
LINC01001-201ENST00000526704 CLEC2BQ92478 149 aa8.34□□□□□ -1.07
LINC01001-201ENST00000526704 TRAV4A0A0B4J268 109 aa8.34□□□□□ -1.07
LINC01001-201ENST00000526704 H7C423 109 aa8.34□□□□□ -1.07
LINC01001-201ENST00000526704 K7EQD1 137 aa8.34□□□□□ -1.07
LINC01001-201ENST00000526704 NDUFA7O95182 113 aa8.34□□□□□ -1.07
LINC01001-201ENST00000526704 HERVK_113P63121 156 aa8.34□□□□□ -1.07
LINC01001-201ENST00000526704 SETXQ7Z333 2677 aaKnown RBP8.34□□□□□ -1.07
LINC01001-201ENST00000526704 APCP25054 2843 aa8.34□□□□□ -1.07
LINC01001-201ENST00000526704 NF1P21359 2839 aa8.34□□□□□ -1.08
LINC01001-201ENST00000526704 TRAV25A0A0B4J276 109 aa8.33□□□□□ -1.08
LINC01001-201ENST00000526704 SONP18583 2426 aaKnown RBP8.33□□□□□ -1.08
LINC01001-201ENST00000526704 NTM-AS1Q6ZSK4 140 aa8.33□□□□□ -1.08
LINC01001-201ENST00000526704 Q6ZTI0 123 aa8.33□□□□□ -1.08
LINC01001-201ENST00000526704 SMIM20Q8N5G0 67 aa8.33□□□□□ -1.08
LINC01001-201ENST00000526704 Q9H8V8 135 aa8.33□□□□□ -1.08
LINC01001-201ENST00000526704 LST1O00453 97 aa8.33□□□□□ -1.08
LINC01001-201ENST00000526704 UBE2WQ96B02 151 aa8.33□□□□□ -1.08
LINC01001-201ENST00000526704 A0A1W2PRX2 142 aa8.32□□□□□ -1.08
LINC01001-201ENST00000526704 SMIM1B2RUZ4 78 aa8.32□□□□□ -1.08
LINC01001-201ENST00000526704 COX6CP09669 75 aa8.32□□□□□ -1.08
LINC01001-201ENST00000526704 C2orf82Q6UX34 121 aa8.32□□□□□ -1.08
LINC01001-201ENST00000526704 TMEM86BQ8N661 226 aa8.32□□□□□ -1.08
LINC01001-201ENST00000526704 C11orf44Q8N8P7 122 aa8.32□□□□□ -1.08
LINC01001-201ENST00000526704 CITED2Q99967 270 aaPredicted RBP8.32□□□□□ -1.08
LINC01001-201ENST00000526704 DNAJC9-AS1A6NH13 148 aa8.32□□□□□ -1.08
LINC01001-201ENST00000526704 CRLF1O75462 422 aa8.32□□□□□ -1.08
LINC01001-201ENST00000526704 RPL36AP83881 106 aaKnown RBP8.32□□□□□ -1.08
LINC01001-201ENST00000526704 LINC00308Q8TCZ7 52 aa8.32□□□□□ -1.08
LINC01001-201ENST00000526704 RPL36ALQ969Q0 106 aaKnown RBP8.32□□□□□ -1.08
LINC01001-201ENST00000526704 NOTCH3Q9UM47 2321 aa8.31□□□□□ -1.08
LINC01001-201ENST00000526704 TRBV10-1A0A0K0K1A3 114 aa8.31□□□□□ -1.08
LINC01001-201ENST00000526704 H3BT86 120 aa8.31□□□□□ -1.08
LINC01001-201ENST00000526704 CSDC2Q9Y534 153 aaKnown RBP8.31□□□□□ -1.08
LINC01001-201ENST00000526704 ZNF625Q96I27 306 aaPredicted RBP8.31□□□□□ -1.08
LINC01001-201ENST00000526704 TRAV13-1A0A0B4J241 112 aa8.3□□□□□ -1.08
LINC01001-201ENST00000526704 DAZ2Q13117 558 aaKnown RBP8.3□□□□□ -1.08
LINC01001-201ENST00000526704 CIRBPQ14011 172 aaKnown RBP8.3□□□□□ -1.08
LINC01001-201ENST00000526704 DAZ4Q86SG3 579 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms