RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 ABCA3Q99758 1704 aa1.72□□□□□ -2.13
USP47-206ENST00000525367 A0A0G2JND7 137 aa1.72□□□□□ -2.13
USP47-206ENST00000525367 COX17Q14061 63 aa1.72□□□□□ -2.13
USP47-206ENST00000525367 MLH3Q9UHC1 1453 aa1.71□□□□□ -2.14
USP47-206ENST00000525367 SHANK2Q9UPX8 1470 aa1.71□□□□□ -2.14
USP47-206ENST00000525367 SYS1-DBNDD2H3BUS1 97 aa1.71□□□□□ -2.14
USP47-206ENST00000525367 K7EIL1 84 aa1.71□□□□□ -2.14
USP47-206ENST00000525367 SAA2P0DJI9 122 aaPredicted RBP1.71□□□□□ -2.14
USP47-206ENST00000525367 PMCHL1Q16048 86 aa1.71□□□□□ -2.14
USP47-206ENST00000525367 PRO1933Q9H354 126 aa1.71□□□□□ -2.14
USP47-206ENST00000525367 LAMC3Q9Y6N6 1575 aa1.71□□□□□ -2.14
USP47-206ENST00000525367 RP1L1Q8IWN7 2480 aaPredicted RBP1.71□□□□□ -2.14
USP47-206ENST00000525367 DOCK2Q92608 1830 aa1.7□□□□□ -2.14
USP47-206ENST00000525367 GVQW2A0A096LPI5 108 aaPredicted RBP1.7□□□□□ -2.14
USP47-206ENST00000525367 UQCRHP07919 91 aa1.7□□□□□ -2.14
USP47-206ENST00000525367 CFAP126Q5VTH2 177 aa1.7□□□□□ -2.14
USP47-206ENST00000525367 Q6ZRX8 168 aa1.7□□□□□ -2.14
USP47-206ENST00000525367 ARFGEF1Q9Y6D6 1849 aa1.69□□□□□ -2.14
USP47-206ENST00000525367 GCHFRP30047 84 aa1.69□□□□□ -2.14
USP47-206ENST00000525367 ZNF137PP52743 207 aa1.69□□□□□ -2.14
USP47-206ENST00000525367 FAM223AQ8IWN6 122 aa1.69□□□□□ -2.14
USP47-206ENST00000525367 CDK13Q14004 1512 aaKnown RBP1.69□□□□□ -2.14
USP47-206ENST00000525367 PI4KAP42356 2102 aa1.69□□□□□ -2.14
USP47-206ENST00000525367 ZMYM4Q5VZL5 1548 aa1.68□□□□□ -2.14
USP47-206ENST00000525367 TRBV25-1A0A075B6N4 114 aa1.68□□□□□ -2.14
USP47-206ENST00000525367 H7BZZ5 65 aa1.68□□□□□ -2.14
USP47-206ENST00000525367 K7EP34 96 aa1.68□□□□□ -2.14
USP47-206ENST00000525367 MGPP08493 103 aa1.68□□□□□ -2.14
USP47-206ENST00000525367 TET3O43151 1660 aa1.67□□□□□ -2.14
USP47-206ENST00000525367 MARF1Q9Y4F3 1742 aaKnown RBP1.67□□□□□ -2.14
USP47-206ENST00000525367 LCN9Q8WX39 176 aa1.67□□□□□ -2.14
USP47-206ENST00000525367 PRR15LQ9BU68 103 aa1.67□□□□□ -2.14
USP47-206ENST00000525367 CCDC18Q5T9S5 1454 aa1.67□□□□□ -2.14
USP47-206ENST00000525367 EHBP1L1Q8N3D4 1523 aa1.66□□□□□ -2.14
USP47-206ENST00000525367 PRDM2Q13029 1718 aa1.66□□□□□ -2.14
USP47-206ENST00000525367 A0A1B0GWA3 101 aa1.66□□□□□ -2.14
USP47-206ENST00000525367 ZNF815PA8K554 130 aa1.66□□□□□ -2.14
USP47-206ENST00000525367 CYB5AP00167 134 aa1.66□□□□□ -2.14
USP47-206ENST00000525367 SPINK9Q5DT21 86 aa1.66□□□□□ -2.14
USP47-206ENST00000525367 C20orf78Q9BR46 151 aa1.66□□□□□ -2.14
USP47-206ENST00000525367 DIP2CQ9Y2E4 1556 aa1.66□□□□□ -2.14
USP47-206ENST00000525367 MYOM1P52179 1685 aa1.66□□□□□ -2.14
USP47-206ENST00000525367 CHD1O14646 1710 aa1.66□□□□□ -2.14
USP47-206ENST00000525367 HMGXB3Q12766 1538 aa1.66□□□□□ -2.14
USP47-206ENST00000525367 SIPA1L3O60292 1781 aaPredicted RBP1.65□□□□□ -2.14
USP47-206ENST00000525367 FAM223BA6NKX1 122 aa1.65□□□□□ -2.15
USP47-206ENST00000525367 SMIM11AP58511 58 aa1.65□□□□□ -2.15
USP47-206ENST00000525367 PSMG4Q5JS54 123 aa1.65□□□□□ -2.15
USP47-206ENST00000525367 S100A16Q96FQ6 103 aaKnown RBP1.65□□□□□ -2.15
USP47-206ENST00000525367 PSME4Q14997 1843 aa1.65□□□□□ -2.15
USP47-206ENST00000525367 TOP2BQ02880 1626 aa1.65□□□□□ -2.15
USP47-206ENST00000525367 ABCC3O15438 1527 aa1.65□□□□□ -2.15
USP47-206ENST00000525367 ARHGEF12Q9NZN5 1544 aa1.65□□□□□ -2.15
USP47-206ENST00000525367 KDM5AP29375 1690 aaKnown RBP1.64□□□□□ -2.15
USP47-206ENST00000525367 M0R3E3 92 aa1.64□□□□□ -2.15
USP47-206ENST00000525367 PIN1P1O15428 100 aa1.64□□□□□ -2.15
USP47-206ENST00000525367 PEA15Q15121 130 aa1.64□□□□□ -2.15
USP47-206ENST00000525367 ZNF720Q7Z2F6 126 aa1.64□□□□□ -2.15
USP47-206ENST00000525367 RABAC1Q9UI14 185 aa1.64□□□□□ -2.15
USP47-206ENST00000525367 TANC1Q9C0D5 1861 aa1.64□□□□□ -2.15
USP47-206ENST00000525367 CNTRLQ7Z7A1 2325 aa1.63□□□□□ -2.15
USP47-206ENST00000525367 MED14O60244 1454 aa1.63□□□□□ -2.15
USP47-206ENST00000525367 KIAA1551Q9HCM1 1747 aa1.63□□□□□ -2.15
USP47-206ENST00000525367 PLIN4Q96Q06 1357 aa1.63□□□□□ -2.15
USP47-206ENST00000525367 BCE1O60756 84 aa1.63□□□□□ -2.15
USP47-206ENST00000525367 PROK2Q9HC23 129 aa1.63□□□□□ -2.15
USP47-206ENST00000525367 LOC285556D6RIA3 1793 aa1.62□□□□□ -2.15
USP47-206ENST00000525367 HMCN1Q96RW7 5635 aa1.62□□□□□ -2.15
USP47-206ENST00000525367 TCHHQ07283 1943 aa1.62□□□□□ -2.15
USP47-206ENST00000525367 UACAQ9BZF9 1416 aa1.62□□□□□ -2.15
USP47-206ENST00000525367 DOCK11Q5JSL3 2073 aa1.62□□□□□ -2.15
USP47-206ENST00000525367 EPRSP07814 1512 aaKnown RBP1.61□□□□□ -2.15
USP47-206ENST00000525367 UNC13BO14795 1591 aa1.61□□□□□ -2.15
USP47-206ENST00000525367 EDC4Q6P2E9 1401 aaKnown RBP1.61□□□□□ -2.15
USP47-206ENST00000525367 MED13LQ71F56 2210 aa1.61□□□□□ -2.15
USP47-206ENST00000525367 C7orf77A4D0Y5 90 aa1.61□□□□□ -2.15
USP47-206ENST00000525367 C10orf142B7Z368 130 aa1.61□□□□□ -2.15
USP47-206ENST00000525367 ATP10BO94823 1461 aa1.61□□□□□ -2.15
USP47-206ENST00000525367 IFT172Q9UG01 1749 aa1.6□□□□□ -2.15
USP47-206ENST00000525367 ABCA1O95477 2261 aa1.6□□□□□ -2.15
USP47-206ENST00000525367 G3V318 75 aa1.6□□□□□ -2.15
USP47-206ENST00000525367 NMBP08949 121 aa1.6□□□□□ -2.15
USP47-206ENST00000525367 FANCAO15360 1455 aa1.6□□□□□ -2.15
USP47-206ENST00000525367 CEP162Q5TB80 1403 aa1.59□□□□□ -2.15
USP47-206ENST00000525367 HMGN3Q15651 99 aa1.59□□□□□ -2.15
USP47-206ENST00000525367 ETDBQ3ZM63 59 aa1.59□□□□□ -2.15
USP47-206ENST00000525367 TMEM263Q8WUH6 116 aaKnown RBP1.59□□□□□ -2.15
USP47-206ENST00000525367 SPRR4Q96PI1 79 aa1.59□□□□□ -2.15
USP47-206ENST00000525367 S100A13Q99584 98 aa1.59□□□□□ -2.15
USP47-206ENST00000525367 LINC00472Q9H8W2 130 aa1.59□□□□□ -2.15
USP47-206ENST00000525367 HIGD1BQ9P298 99 aa1.59□□□□□ -2.15
USP47-206ENST00000525367 ARHGEF5Q12774 1597 aa1.59□□□□□ -2.16
USP47-206ENST00000525367 KRTAP10-4P60372 401 aaPredicted RBP1.58□□□□□ -2.16
USP47-206ENST00000525367 HAMPP81172 84 aa1.58□□□□□ -2.16
USP47-206ENST00000525367 UBE2DNLQ8IWF7 75 aa1.58□□□□□ -2.16
USP47-206ENST00000525367 MAP2P11137 1827 aaKnown RBP1.58□□□□□ -2.16
USP47-206ENST00000525367 SSC5DA1L4H1 1573 aa1.58□□□□□ -2.16
USP47-206ENST00000525367 KIF21AQ7Z4S6 1674 aa1.58□□□□□ -2.16
USP47-206ENST00000525367 ABCC2Q92887 1545 aa1.57□□□□□ -2.16
USP47-206ENST00000525367 S100A3P33764 101 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms