RNA–Protein interactions for RNA: ENST00000524926.5

BEST1-204, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 2,404 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-204ENST00000524926 IGHV3-64A0A075B6Q5 118 aa10.78□□□□□ -0.68
BEST1-204ENST00000524926 TMEM223A0PJW6 202 aa10.78□□□□□ -0.68
BEST1-204ENST00000524926 A6NDN8 102 aa10.78□□□□□ -0.68
BEST1-204ENST00000524926 TAX1BP3O14907 124 aa10.78□□□□□ -0.68
BEST1-204ENST00000524926 SCGB1D4Q6XE38 83 aa10.78□□□□□ -0.68
BEST1-204ENST00000524926 TIMM21Q9BVV7 248 aa10.78□□□□□ -0.68
BEST1-204ENST00000524926 GTSF1LQ9H1H1 148 aa10.78□□□□□ -0.68
BEST1-204ENST00000524926 IGHV4-28A0A0C4DH34 117 aa10.78□□□□□ -0.68
BEST1-204ENST00000524926 LYRM9A8MSI8 78 aa10.77□□□□□ -0.68
BEST1-204ENST00000524926 UBE2L6O14933 153 aa10.77□□□□□ -0.68
BEST1-204ENST00000524926 HIST1H4GQ99525 98 aa10.77□□□□□ -0.68
BEST1-204ENST00000524926 J3QQQ9 107 aa10.77□□□□□ -0.69
BEST1-204ENST00000524926 LGALS3P17931 250 aaKnown RBP10.77□□□□□ -0.69
BEST1-204ENST00000524926 TSPEAR-AS2P59090 65 aa10.77□□□□□ -0.69
BEST1-204ENST00000524926 TMEM243Q9BU79 118 aa10.77□□□□□ -0.69
BEST1-204ENST00000524926 PTTG1IPP53801 180 aa10.76□□□□□ -0.69
BEST1-204ENST00000524926 KRTAP10-11P60412 298 aa10.76□□□□□ -0.69
BEST1-204ENST00000524926 SBSPONQ8IVN8 264 aa10.76□□□□□ -0.69
BEST1-204ENST00000524926 CEND1Q8N111 149 aa10.76□□□□□ -0.69
BEST1-204ENST00000524926 K7EP13 123 aa10.76□□□□□ -0.69
BEST1-204ENST00000524926 FXYD2P54710 66 aa10.76□□□□□ -0.69
BEST1-204ENST00000524926 AMMECR1LQ6DCA0 310 aa10.76□□□□□ -0.69
BEST1-204ENST00000524926 PLEKHB2Q96CS7 222 aa10.76□□□□□ -0.69
BEST1-204ENST00000524926 TINCRA0A1B0GVN0 87 aa10.75□□□□□ -0.69
BEST1-204ENST00000524926 LEPROTO15243 131 aa10.75□□□□□ -0.69
BEST1-204ENST00000524926 MIFP14174 115 aa10.75□□□□□ -0.69
BEST1-204ENST00000524926 RNF183Q96D59 192 aa10.75□□□□□ -0.69
BEST1-204ENST00000524926 GEMIN7Q9H840 131 aaKnown RBP10.75□□□□□ -0.69
BEST1-204ENST00000524926 GYPEP15421 78 aa10.75□□□□□ -0.69
BEST1-204ENST00000524926 UBE2D1P51668 147 aa10.75□□□□□ -0.69
BEST1-204ENST00000524926 SMAGPQ0VAQ4 97 aa10.75□□□□□ -0.69
BEST1-204ENST00000524926 CSDC2Q9Y534 153 aaKnown RBP10.75□□□□□ -0.69
BEST1-204ENST00000524926 STAB1Q9NY15 2570 aa10.75□□□□□ -0.69
BEST1-204ENST00000524926 TAL2Q16559 108 aa10.74□□□□□ -0.69
BEST1-204ENST00000524926 Q8NAQ8 132 aa10.74□□□□□ -0.69
BEST1-204ENST00000524926 OR5A1Q8NGJ0 315 aa10.74□□□□□ -0.69
BEST1-204ENST00000524926 PRO0255Q9UI72 69 aa10.74□□□□□ -0.69
BEST1-204ENST00000524926 TM2D2Q9BX73 214 aa10.74□□□□□ -0.69
BEST1-204ENST00000524926 DAD1P61803 113 aa10.73□□□□□ -0.69
BEST1-204ENST00000524926 TMEM101Q96IK0 257 aa10.73□□□□□ -0.69
BEST1-204ENST00000524926 TRBV6-8A0A0A6YYG3 113 aa10.73□□□□□ -0.69
BEST1-204ENST00000524926 RAB37Q96AX2 223 aa10.73□□□□□ -0.69
BEST1-204ENST00000524926 CDC42SE2Q9NRR3 84 aa10.73□□□□□ -0.69
BEST1-204ENST00000524926 TRAV8-3A0A0A6YYJ7 113 aa10.72□□□□□ -0.69
BEST1-204ENST00000524926 TRAV13-1A0A0B4J241 112 aa10.72□□□□□ -0.69
BEST1-204ENST00000524926 GAGE6Q13070 117 aa10.72□□□□□ -0.69
BEST1-204ENST00000524926 SRSF9Q13242 221 aaKnown RBP eCLIP10.72□□□□□ -0.69
BEST1-204ENST00000524926 ATP6V0E2Q8NHE4 81 aa10.72□□□□□ -0.69
BEST1-204ENST00000524926 H3BRM9 83 aa10.72□□□□□ -0.69
BEST1-204ENST00000524926 IGHV3-30-3P0DP02 117 aa10.72□□□□□ -0.69
BEST1-204ENST00000524926 VAMP3Q15836 100 aa10.72□□□□□ -0.69
BEST1-204ENST00000524926 CHCHD5Q9BSY4 110 aa10.72□□□□□ -0.69
BEST1-204ENST00000524926 CELA1Q9UNI1 258 aa10.72□□□□□ -0.69
BEST1-204ENST00000524926 PAX4O43316 350 aa10.71□□□□□ -0.69
BEST1-204ENST00000524926 SMIM13P0DJ93 91 aa10.71□□□□□ -0.69
BEST1-204ENST00000524926 NHP2Q9NX24 153 aaKnown RBP10.71□□□□□ -0.69
BEST1-204ENST00000524926 A0A0J9YY99 117 aa10.7□□□□□ -0.7
BEST1-204ENST00000524926 H7C423 109 aa10.7□□□□□ -0.7
BEST1-204ENST00000524926 SPINK8P0C7L1 97 aa10.7□□□□□ -0.7
BEST1-204ENST00000524926 EGFEM1PQ0D2K5 195 aa10.7□□□□□ -0.7
BEST1-204ENST00000524926 CDKN2A-AS1Q9UH64 79 aa10.7□□□□□ -0.7
BEST1-204ENST00000524926 MAST4O15021 2626 aa10.7□□□□□ -0.7
BEST1-204ENST00000524926 A0A096LPF7 62 aa10.7□□□□□ -0.7
BEST1-204ENST00000524926 IGHV1-58A0A0C4DH39 117 aa10.7□□□□□ -0.7
BEST1-204ENST00000524926 SPART-AS1P0CW21 52 aa10.7□□□□□ -0.7
BEST1-204ENST00000524926 TIRAPP58753 221 aa10.7□□□□□ -0.7
BEST1-204ENST00000524926 COX6A2Q02221 97 aa10.7□□□□□ -0.7
BEST1-204ENST00000524926 LINC00242Q5T6M2 205 aa10.69□□□□□ -0.7
BEST1-204ENST00000524926 K7ERJ3 54 aa10.68□□□□□ -0.7
BEST1-204ENST00000524926 ATP5G1P05496 136 aa10.68□□□□□ -0.7
BEST1-204ENST00000524926 HERVK_113P63121 156 aa10.68□□□□□ -0.7
BEST1-204ENST00000524926 VSIG2Q96IQ7 327 aa10.68□□□□□ -0.7
BEST1-204ENST00000524926 NAA38Q9BRA0 125 aaKnown RBP10.68□□□□□ -0.7
BEST1-204ENST00000524926 PKD1L1Q8TDX9 2849 aa10.68□□□□□ -0.7
BEST1-204ENST00000524926 C9orf118A6NHY6 69 aa10.67□□□□□ -0.7
BEST1-204ENST00000524926 A8MZ25 164 aa10.67□□□□□ -0.7
BEST1-204ENST00000524926 G3V4G9 280 aa10.67□□□□□ -0.7
BEST1-204ENST00000524926 H3BUT2 72 aa10.67□□□□□ -0.7
BEST1-204ENST00000524926 HTN3P15516 51 aa10.67□□□□□ -0.7
BEST1-204ENST00000524926 F5H768 121 aa10.67□□□□□ -0.7
BEST1-204ENST00000524926 IGLV4-60A0A075B6I1 120 aa10.66□□□□□ -0.7
BEST1-204ENST00000524926 IGLV5-45A0A087WSX0 123 aa10.66□□□□□ -0.7
BEST1-204ENST00000524926 IGKV3OR2-268A0A0C4DH90 116 aa10.66□□□□□ -0.7
BEST1-204ENST00000524926 RETNQ9HD89 108 aa10.66□□□□□ -0.7
BEST1-204ENST00000524926 CMYA5Q8N3K9 4069 aa10.66□□□□□ -0.7
BEST1-204ENST00000524926 TRAV26-1A0A087WT03 109 aa10.66□□□□□ -0.7
BEST1-204ENST00000524926 UBE2V1Q13404 147 aa10.66□□□□□ -0.7
BEST1-204ENST00000524926 TMEM262E9PQX1 116 aa10.65□□□□□ -0.7
BEST1-204ENST00000524926 C10orf126Q8N4M7 172 aa10.65□□□□□ -0.7
BEST1-204ENST00000524926 C12orf74Q32Q52 190 aa10.65□□□□□ -0.71
BEST1-204ENST00000524926 FAM19A3Q7Z5A8 133 aa10.65□□□□□ -0.71
BEST1-204ENST00000524926 NDUFA12Q9UI09 145 aa10.65□□□□□ -0.71
BEST1-204ENST00000524926 COL6A5A8TX70 2615 aa10.64□□□□□ -0.71
BEST1-204ENST00000524926 SPANXB1Q9NS25 103 aaPredicted RBP10.64□□□□□ -0.71
BEST1-204ENST00000524926 A0A0J9YXY3 114 aa10.63□□□□□ -0.71
BEST1-204ENST00000524926 TMEM238LA0A1B0GVL6 79 aa10.63□□□□□ -0.71
BEST1-204ENST00000524926 A6NJY4 79 aa10.63□□□□□ -0.71
BEST1-204ENST00000524926 CCL25O15444 150 aa10.63□□□□□ -0.71
BEST1-204ENST00000524926 IGHV3-30P01768 117 aa10.63□□□□□ -0.71
BEST1-204ENST00000524926 IGHV3-30-5P0DP03 117 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms