RNA–Protein interactions for RNA: ENST00000524306.1

CLINT1-208, Transcript of clathrin interactor 1, humanhuman

TSL 1 (best)

Gene CLINT1, Length 2,905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-208ENST00000524306 SFTA2Q6UW10 78 aa3.89□□□□□ -1.79
CLINT1-208ENST00000524306 KIR2DL5BQ8NHK3 375 aa3.89□□□□□ -1.79
CLINT1-208ENST00000524306 ANKRD17O75179 2603 aaKnown RBP3.89□□□□□ -1.79
CLINT1-208ENST00000524306 APCP25054 2843 aa3.89□□□□□ -1.79
CLINT1-208ENST00000524306 IGHV3-73A0A0B4J1V6 119 aa3.89□□□□□ -1.79
CLINT1-208ENST00000524306 PSMB2P49721 201 aa3.89□□□□□ -1.79
CLINT1-208ENST00000524306 KHDC1LQ5JSQ8 128 aa3.89□□□□□ -1.79
CLINT1-208ENST00000524306 LINC00242Q5T6M2 205 aa3.89□□□□□ -1.79
CLINT1-208ENST00000524306 LINC01561Q8N1V8 128 aa3.89□□□□□ -1.79
CLINT1-208ENST00000524306 TMEM101Q96IK0 257 aa3.89□□□□□ -1.79
CLINT1-208ENST00000524306 CITED2Q99967 270 aaPredicted RBP3.89□□□□□ -1.79
CLINT1-208ENST00000524306 CDC42SE2Q9NRR3 84 aa3.89□□□□□ -1.79
CLINT1-208ENST00000524306 XCL2Q9UBD3 114 aa3.89□□□□□ -1.79
CLINT1-208ENST00000524306 AKAP9Q99996 3911 aa3.89□□□□□ -1.79
CLINT1-208ENST00000524306 NACAE9PAV3 2078 aa3.89□□□□□ -1.79
CLINT1-208ENST00000524306 TRAV26-1A0A087WT03 109 aa3.88□□□□□ -1.79
CLINT1-208ENST00000524306 LOC107984156A0A0G2JMH3 177 aa3.88□□□□□ -1.79
CLINT1-208ENST00000524306 SMIM9A6NGZ8 99 aa3.88□□□□□ -1.79
CLINT1-208ENST00000524306 F5H768 121 aa3.88□□□□□ -1.79
CLINT1-208ENST00000524306 SH2D6Q7Z4S9 175 aa3.88□□□□□ -1.79
CLINT1-208ENST00000524306 ARL17AQ8IVW1 177 aa3.88□□□□□ -1.79
CLINT1-208ENST00000524306 AGRNO00468 2067 aa3.88□□□□□ -1.79
CLINT1-208ENST00000524306 UTP20O75691 2785 aaKnown RBP3.88□□□□□ -1.79
CLINT1-208ENST00000524306 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.88□□□□□ -1.79
CLINT1-208ENST00000524306 TRGV1A0A0A0MS02 117 aa3.88□□□□□ -1.79
CLINT1-208ENST00000524306 IGKV2-29A2NJV5 120 aaPredicted RBP3.88□□□□□ -1.79
CLINT1-208ENST00000524306 H3BT86 120 aa3.88□□□□□ -1.79
CLINT1-208ENST00000524306 SPINK8P0C7L1 97 aa3.88□□□□□ -1.79
CLINT1-208ENST00000524306 DEFB121Q5J5C9 76 aa3.88□□□□□ -1.79
CLINT1-208ENST00000524306 NTM-AS1Q6ZSK4 140 aa3.88□□□□□ -1.79
CLINT1-208ENST00000524306 ZNF625Q96I27 306 aaPredicted RBP3.88□□□□□ -1.79
CLINT1-208ENST00000524306 NBASA2RRP1 2371 aa3.88□□□□□ -1.79
CLINT1-208ENST00000524306 TRBV10-2A0A0K0K1G8 114 aa3.88□□□□□ -1.79
CLINT1-208ENST00000524306 SMIM1B2RUZ4 78 aa3.88□□□□□ -1.79
CLINT1-208ENST00000524306 PF4P02776 101 aa3.88□□□□□ -1.79
CLINT1-208ENST00000524306 COX6CP09669 75 aa3.88□□□□□ -1.79
CLINT1-208ENST00000524306 HTN1P15515 57 aa3.88□□□□□ -1.79
CLINT1-208ENST00000524306 INSL3P51460 131 aa3.88□□□□□ -1.79
CLINT1-208ENST00000524306 OXLD1Q5BKU9 147 aa3.88□□□□□ -1.79
CLINT1-208ENST00000524306 DGAT2L7PQ6IED9 249 aa3.88□□□□□ -1.79
CLINT1-208ENST00000524306 TMEM243Q9BU79 118 aa3.88□□□□□ -1.79
CLINT1-208ENST00000524306 CDIP1Q9H305 208 aa3.88□□□□□ -1.79
CLINT1-208ENST00000524306 Q9UF83 564 aa3.88□□□□□ -1.79
CLINT1-208ENST00000524306 CDKN2A-AS1Q9UH64 79 aa3.88□□□□□ -1.79
CLINT1-208ENST00000524306 DOPEY2Q9Y3R5 2298 aa3.87□□□□□ -1.79
CLINT1-208ENST00000524306 TRAV8-3A0A0A6YYJ7 113 aa3.87□□□□□ -1.79
CLINT1-208ENST00000524306 LINC01620Q4KN68 170 aa3.87□□□□□ -1.79
CLINT1-208ENST00000524306 ADAMTSL4-AS1Q5T5F5 129 aa3.87□□□□□ -1.79
CLINT1-208ENST00000524306 CEMP1Q6PRD7 247 aaPredicted RBP3.87□□□□□ -1.79
CLINT1-208ENST00000524306 ICOSQ9Y6W8 199 aa3.87□□□□□ -1.79
CLINT1-208ENST00000524306 SLC25A20O43772 301 aa3.87□□□□□ -1.79
CLINT1-208ENST00000524306 SCGB1C2P0DMR2 95 aa3.87□□□□□ -1.79
CLINT1-208ENST00000524306 FAM222AQ5U5X8 452 aa3.87□□□□□ -1.79
CLINT1-208ENST00000524306 Q6ZTI0 123 aa3.87□□□□□ -1.79
CLINT1-208ENST00000524306 ANKRD29Q8N6D5 301 aa3.87□□□□□ -1.79
CLINT1-208ENST00000524306 CARD19Q96LW7 228 aa3.87□□□□□ -1.79
CLINT1-208ENST00000524306 PRM2P04554 102 aa3.86□□□□□ -1.79
CLINT1-208ENST00000524306 MRPL23Q16540 153 aaKnown RBP3.86□□□□□ -1.79
CLINT1-208ENST00000524306 Q6Q795 121 aa3.86□□□□□ -1.79
CLINT1-208ENST00000524306 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.86□□□□□ -1.79
CLINT1-208ENST00000524306 MYO18BQ8IUG5 2567 aa3.86□□□□□ -1.79
CLINT1-208ENST00000524306 USP9YO00507 2555 aaPredicted RBP3.86□□□□□ -1.79
CLINT1-208ENST00000524306 LST1O00453 97 aa3.86□□□□□ -1.79
CLINT1-208ENST00000524306 TRIAP1O43715 76 aa3.86□□□□□ -1.79
CLINT1-208ENST00000524306 COX6A2Q02221 97 aa3.86□□□□□ -1.79
CLINT1-208ENST00000524306 FHL2Q14192 279 aa3.86□□□□□ -1.79
CLINT1-208ENST00000524306 LINC00308Q8TCZ7 52 aa3.86□□□□□ -1.79
CLINT1-208ENST00000524306 FAM208BQ5VWN6 2430 aa3.86□□□□□ -1.79
CLINT1-208ENST00000524306 FAM240AA0A1B0GVK7 77 aa3.85□□□□□ -1.79
CLINT1-208ENST00000524306 DEFB104AQ8WTQ1 72 aa3.85□□□□□ -1.79
CLINT1-208ENST00000524306 COL12A1Q99715 3063 aa3.85□□□□□ -1.79
CLINT1-208ENST00000524306 SPTAN1Q13813 2472 aaKnown RBP3.85□□□□□ -1.79
CLINT1-208ENST00000524306 CELSR2Q9HCU4 2923 aa3.85□□□□□ -1.79
CLINT1-208ENST00000524306 IGHV3-64A0A075B6Q5 118 aa3.85□□□□□ -1.79
CLINT1-208ENST00000524306 IGHV3-38A0A0C4DH36 116 aa3.85□□□□□ -1.79
CLINT1-208ENST00000524306 A0A1B0GUV1 79 aa3.85□□□□□ -1.79
CLINT1-208ENST00000524306 GAGE5Q13069 117 aa3.85□□□□□ -1.79
CLINT1-208ENST00000524306 GAGE6Q13070 117 aa3.85□□□□□ -1.79
CLINT1-208ENST00000524306 LINC00482Q8N8I6 264 aa3.85□□□□□ -1.79
CLINT1-208ENST00000524306 ANAPC13Q9BS18 74 aa3.85□□□□□ -1.79
CLINT1-208ENST00000524306 NOP10Q9NPE3 64 aaKnown RBP3.85□□□□□ -1.79
CLINT1-208ENST00000524306 ANK3Q12955 4377 aaKnown RBP3.85□□□□□ -1.79
CLINT1-208ENST00000524306 TRBV6-8A0A0A6YYG3 113 aa3.84□□□□□ -1.79
CLINT1-208ENST00000524306 UBE2L6O14933 153 aa3.84□□□□□ -1.79
CLINT1-208ENST00000524306 Q9H8V8 135 aa3.84□□□□□ -1.79
CLINT1-208ENST00000524306 CSMD1Q96PZ7 3565 aa3.84□□□□□ -1.79
CLINT1-208ENST00000524306 C9JAW5 83 aa3.84□□□□□ -1.79
CLINT1-208ENST00000524306 TRACP01848 142 aa3.84□□□□□ -1.79
CLINT1-208ENST00000524306 XGP55808 180 aa3.84□□□□□ -1.79
CLINT1-208ENST00000524306 CELSR1Q9NYQ6 3014 aa3.84□□□□□ -1.8
CLINT1-208ENST00000524306 A0A087WZ39 114 aa3.84□□□□□ -1.8
CLINT1-208ENST00000524306 A0A1W2PRX2 142 aa3.84□□□□□ -1.8
CLINT1-208ENST00000524306 GAGE12JA6NER3 117 aa3.84□□□□□ -1.8
CLINT1-208ENST00000524306 LYRM9A8MSI8 78 aa3.84□□□□□ -1.8
CLINT1-208ENST00000524306 COX7A2LO14548 114 aa3.84□□□□□ -1.8
CLINT1-208ENST00000524306 MT-ATP8P03928 68 aa3.84□□□□□ -1.8
CLINT1-208ENST00000524306 PRSS2P07478 247 aa3.84□□□□□ -1.8
CLINT1-208ENST00000524306 GAGE4Q13068 117 aa3.84□□□□□ -1.8
CLINT1-208ENST00000524306 Q1RN00 199 aa3.84□□□□□ -1.8
CLINT1-208ENST00000524306 RNASE13Q5GAN3 156 aaKnown RBP3.84□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms