RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 CIRBPQ14011 172 aaKnown RBP6.07□□□□□ -1.44
SDC2-207ENST00000522911 PMCHL1Q16048 86 aa6.07□□□□□ -1.44
SDC2-207ENST00000522911 FAM74A4Q5TZK3 123 aa6.07□□□□□ -1.44
SDC2-207ENST00000522911 ATP5L2Q7Z4Y8 100 aa6.07□□□□□ -1.44
SDC2-207ENST00000522911 BORCS7Q96B45 105 aa6.07□□□□□ -1.44
SDC2-207ENST00000522911 SSBP4Q9BWG4 385 aaPredicted RBP6.07□□□□□ -1.44
SDC2-207ENST00000522911 A0A087WWL8 130 aa6.06□□□□□ -1.44
SDC2-207ENST00000522911 M0R381 172 aa6.06□□□□□ -1.44
SDC2-207ENST00000522911 SNAI2O43623 268 aa6.06□□□□□ -1.44
SDC2-207ENST00000522911 OR5AL1P0C617 328 aa6.06□□□□□ -1.44
SDC2-207ENST00000522911 KRTAP26-1Q6PEX3 210 aa6.06□□□□□ -1.44
SDC2-207ENST00000522911 TMEM136Q6ZRR5 245 aa6.06□□□□□ -1.44
SDC2-207ENST00000522911 NEXN-AS1Q8NBZ9 246 aa6.06□□□□□ -1.44
SDC2-207ENST00000522911 MLST8Q9BVC4 326 aa6.06□□□□□ -1.44
SDC2-207ENST00000522911 PLA2G2DQ9UNK4 145 aa6.06□□□□□ -1.44
SDC2-207ENST00000522911 GRIFINA4D1Z8 144 aa6.05□□□□□ -1.44
SDC2-207ENST00000522911 USP17L23D6RBM5 183 aa6.05□□□□□ -1.44
SDC2-207ENST00000522911 CRPP02741 224 aa6.05□□□□□ -1.44
SDC2-207ENST00000522911 AMTP48728 403 aa6.05□□□□□ -1.44
SDC2-207ENST00000522911 RPL37AP61513 92 aaKnown RBP6.05□□□□□ -1.44
SDC2-207ENST00000522911 UBE2G1P62253 170 aa6.05□□□□□ -1.44
SDC2-207ENST00000522911 CNBPP62633 177 aaKnown RBP6.05□□□□□ -1.44
SDC2-207ENST00000522911 MPV17L2Q567V2 206 aa6.05□□□□□ -1.44
SDC2-207ENST00000522911 CT83Q5H943 113 aa6.05□□□□□ -1.44
SDC2-207ENST00000522911 COL5A1-AS1Q5SY13 56 aa6.05□□□□□ -1.44
SDC2-207ENST00000522911 DAZAP1Q96EP5 407 aaKnown RBP6.05□□□□□ -1.44
SDC2-207ENST00000522911 SNHG12Q9BXW3 62 aa6.05□□□□□ -1.44
SDC2-207ENST00000522911 UQCR10Q9UDW1 63 aa6.05□□□□□ -1.44
SDC2-207ENST00000522911 FAM231BA6NCW3 169 aa6.04□□□□□ -1.44
SDC2-207ENST00000522911 PRSS1P07477 247 aa6.04□□□□□ -1.44
SDC2-207ENST00000522911 KRTDAPP60985 99 aa6.04□□□□□ -1.44
SDC2-207ENST00000522911 SDIM1Q6ZPB5 146 aa6.04□□□□□ -1.44
SDC2-207ENST00000522911 Q6ZRU5 148 aa6.04□□□□□ -1.44
SDC2-207ENST00000522911 TSKUQ8WUA8 353 aa6.04□□□□□ -1.44
SDC2-207ENST00000522911 RNF185Q96GF1 192 aa6.04□□□□□ -1.44
SDC2-207ENST00000522911 GFRA4Q9GZZ7 299 aa6.04□□□□□ -1.44
SDC2-207ENST00000522911 A8MWL6 223 aa6.03□□□□□ -1.44
SDC2-207ENST00000522911 TMEM262E9PQX1 116 aa6.03□□□□□ -1.44
SDC2-207ENST00000522911 NUPR1O60356 82 aa6.03□□□□□ -1.44
SDC2-207ENST00000522911 ANGP03950 147 aaKnown RBP6.03□□□□□ -1.44
SDC2-207ENST00000522911 LINC00614P0C842 121 aa6.03□□□□□ -1.44
SDC2-207ENST00000522911 MT1HL1P0DM35 61 aa6.03□□□□□ -1.44
SDC2-207ENST00000522911 PMCHP20382 165 aa6.03□□□□□ -1.44
SDC2-207ENST00000522911 HNRNPA3P51991 378 aaKnown RBP6.03□□□□□ -1.44
SDC2-207ENST00000522911 NTM-AS1Q6ZSK4 140 aa6.03□□□□□ -1.44
SDC2-207ENST00000522911 RNASE7Q9H1E1 156 aaKnown RBP6.03□□□□□ -1.44
SDC2-207ENST00000522911 KIF25-AS1Q9Y6Z4 181 aa6.03□□□□□ -1.44
SDC2-207ENST00000522911 TRAV8-4A0A0B4J246 113 aa6.02□□□□□ -1.45
SDC2-207ENST00000522911 A0A1B0GUV1 79 aa6.02□□□□□ -1.45
SDC2-207ENST00000522911 HSBP1O75506 76 aa6.02□□□□□ -1.45
SDC2-207ENST00000522911 P01737 135 aa6.02□□□□□ -1.45
SDC2-207ENST00000522911 OR10AG1Q8NH19 301 aa6.02□□□□□ -1.45
SDC2-207ENST00000522911 CHCHD1Q96BP2 118 aaKnown RBP6.02□□□□□ -1.45
SDC2-207ENST00000522911 CHCHD5Q9BSY4 110 aa6.02□□□□□ -1.45
SDC2-207ENST00000522911 PAM16Q9Y3D7 125 aa6.02□□□□□ -1.45
SDC2-207ENST00000522911 TRBV25-1A0A075B6N4 114 aa6.01□□□□□ -1.45
SDC2-207ENST00000522911 TMSB15BA0A087X1C1 80 aa6.01□□□□□ -1.45
SDC2-207ENST00000522911 A0A1B0GW15 77 aa6.01□□□□□ -1.45
SDC2-207ENST00000522911 LINC00310P59036 64 aa6.01□□□□□ -1.45
SDC2-207ENST00000522911 RBX1P62877 108 aa6.01□□□□□ -1.45
SDC2-207ENST00000522911 HBBP68871 147 aa6.01□□□□□ -1.45
SDC2-207ENST00000522911 ZNF56Q15929 161 aa6.01□□□□□ -1.45
SDC2-207ENST00000522911 SPATA45Q537H7 98 aa6.01□□□□□ -1.45
SDC2-207ENST00000522911 MRPL54Q6P161 138 aaKnown RBP6.01□□□□□ -1.45
SDC2-207ENST00000522911 NUDT10Q8NFP7 164 aa6.01□□□□□ -1.45
SDC2-207ENST00000522911 NUDT11Q96G61 164 aa6.01□□□□□ -1.45
SDC2-207ENST00000522911 RPP21Q9H633 154 aaKnown RBP6.01□□□□□ -1.45
SDC2-207ENST00000522911 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.01□□□□□ -1.45
SDC2-207ENST00000522911 DLEU1O43261 78 aa6□□□□□ -1.45
SDC2-207ENST00000522911 ZNF25P17030 456 aaPredicted RBP6□□□□□ -1.45
SDC2-207ENST00000522911 LINC00269Q8N2A0 174 aa6□□□□□ -1.45
SDC2-207ENST00000522911 NUP35Q8NFH5 326 aa6□□□□□ -1.45
SDC2-207ENST00000522911 C18orf32Q8TCD1 76 aa6□□□□□ -1.45
SDC2-207ENST00000522911 AP1S3Q96PC3 154 aa6□□□□□ -1.45
SDC2-207ENST00000522911 HIGD1CA8MV81 97 aa5.99□□□□□ -1.45
SDC2-207ENST00000522911 HSBP1L1C9JCN9 74 aa5.99□□□□□ -1.45
SDC2-207ENST00000522911 H7C1H1 209 aa5.99□□□□□ -1.45
SDC2-207ENST00000522911 PANO1I0J062 215 aa5.99□□□□□ -1.45
SDC2-207ENST00000522911 M0QY20 66 aa5.99□□□□□ -1.45
SDC2-207ENST00000522911 C3orf79P0CE67 100 aa5.99□□□□□ -1.45
SDC2-207ENST00000522911 CTRLP40313 264 aa5.99□□□□□ -1.45
SDC2-207ENST00000522911 SPANXN1Q5VSR9 72 aa5.99□□□□□ -1.45
SDC2-207ENST00000522911 OR2D3Q8NGH3 330 aa5.99□□□□□ -1.45
SDC2-207ENST00000522911 PGLYRP4Q96LB8 373 aa5.99□□□□□ -1.45
SDC2-207ENST00000522911 ALKBH7Q9BT30 221 aaPredicted RBP5.99□□□□□ -1.45
SDC2-207ENST00000522911 LRP2P98164 4655 aa5.99□□□□□ -1.45
SDC2-207ENST00000522911 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.98□□□□□ -1.45
SDC2-207ENST00000522911 IGHV1-24A0A0C4DH33 117 aa5.98□□□□□ -1.45
SDC2-207ENST00000522911 A0A1B0GXF2 115 aa5.98□□□□□ -1.45
SDC2-207ENST00000522911 IGLC6P0CF74 106 aa5.98□□□□□ -1.45
SDC2-207ENST00000522911 SMIM17P0DL12 118 aa5.98□□□□□ -1.45
SDC2-207ENST00000522911 IGLC3P0DOY3 106 aa5.98□□□□□ -1.45
SDC2-207ENST00000522911 NTF3P20783 257 aa5.98□□□□□ -1.45
SDC2-207ENST00000522911 REG3AQ06141 175 aa5.98□□□□□ -1.45
SDC2-207ENST00000522911 RIGQ13278 110 aa5.98□□□□□ -1.45
SDC2-207ENST00000522911 KIAA1644Q3SXP7 199 aa5.98□□□□□ -1.45
SDC2-207ENST00000522911 Q6ZN92 141 aa5.98□□□□□ -1.45
SDC2-207ENST00000522911 C20orf203Q8NBC4 194 aa5.98□□□□□ -1.45
SDC2-207ENST00000522911 ORAOV1Q8WV07 137 aa5.98□□□□□ -1.45
SDC2-207ENST00000522911 TMEM191AQ9H0A3 160 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms