RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 SPRR2GQ9BYE4 73 aa0.1□□□□□ -2.39
SKP1-207ENST00000520417 NDUFA4L2Q9NRX3 87 aa0.1□□□□□ -2.39
SKP1-207ENST00000520417 MYH7P12883 1935 aa0.1□□□□□ -2.39
SKP1-207ENST00000520417 BICRAQ9NZM4 1560 aa0.1□□□□□ -2.39
SKP1-207ENST00000520417 C2CD3Q4AC94 2353 aa0.1□□□□□ -2.39
SKP1-207ENST00000520417 NSD1Q96L73 2696 aaPredicted RBP0.1□□□□□ -2.39
SKP1-207ENST00000520417 PKDREJQ9NTG1 2253 aa0.1□□□□□ -2.39
SKP1-207ENST00000520417 MRC1P22897 1456 aa0.1□□□□□ -2.39
SKP1-207ENST00000520417 SPTBN4Q9H254 2564 aa0.09□□□□□ -2.39
SKP1-207ENST00000520417 MUC12Q9UKN1 5478 aa0.09□□□□□ -2.39
SKP1-207ENST00000520417 KTN1Q86UP2 1357 aaKnown RBP0.09□□□□□ -2.39
SKP1-207ENST00000520417 GOLGA4Q13439 2230 aaKnown RBP0.09□□□□□ -2.39
SKP1-207ENST00000520417 A0A1B0GV90 55 aa0.09□□□□□ -2.4
SKP1-207ENST00000520417 C10orf142B7Z368 130 aa0.09□□□□□ -2.4
SKP1-207ENST00000520417 HMGN4O00479 90 aa0.09□□□□□ -2.4
SKP1-207ENST00000520417 TNFP01375 233 aa0.09□□□□□ -2.4
SKP1-207ENST00000520417 S100A1P23297 94 aa0.09□□□□□ -2.4
SKP1-207ENST00000520417 GNG11P61952 73 aa0.09□□□□□ -2.4
SKP1-207ENST00000520417 COMMD6Q7Z4G1 85 aa0.09□□□□□ -2.4
SKP1-207ENST00000520417 Q8IZM0 81 aa0.09□□□□□ -2.4
SKP1-207ENST00000520417 SVBPQ8N300 66 aa0.09□□□□□ -2.4
SKP1-207ENST00000520417 LINC00474Q9P2X8 69 aa0.09□□□□□ -2.4
SKP1-207ENST00000520417 LINC01558Q9Y6Z2 57 aa0.09□□□□□ -2.4
SKP1-207ENST00000520417 ABCA2Q9BZC7 2435 aa0.09□□□□□ -2.4
SKP1-207ENST00000520417 NWD2Q9ULI1 1742 aa0.09□□□□□ -2.4
SKP1-207ENST00000520417 LRRC37A3O60309 1634 aa0.09□□□□□ -2.4
SKP1-207ENST00000520417 HIVEP3Q5T1R4 2406 aa0.08□□□□□ -2.4
SKP1-207ENST00000520417 RNF213Q63HN8 5207 aa0.08□□□□□ -2.4
SKP1-207ENST00000520417 IFT172Q9UG01 1749 aa0.08□□□□□ -2.4
SKP1-207ENST00000520417 MYOM3Q5VTT5 1437 aa0.08□□□□□ -2.4
SKP1-207ENST00000520417 F6UZH7 168 aa0.08□□□□□ -2.4
SKP1-207ENST00000520417 DLEU1O43261 78 aa0.08□□□□□ -2.4
SKP1-207ENST00000520417 SFT2D2O95562 160 aa0.08□□□□□ -2.4
SKP1-207ENST00000520417 UBA52P62987 128 aaKnown RBP0.08□□□□□ -2.4
SKP1-207ENST00000520417 DCDP81605 110 aaKnown RBP0.08□□□□□ -2.4
SKP1-207ENST00000520417 WFDC2Q14508 124 aa0.08□□□□□ -2.4
SKP1-207ENST00000520417 DEFB109BQ30KR1 87 aa0.08□□□□□ -2.4
SKP1-207ENST00000520417 FAIMQ9NVQ4 179 aa0.08□□□□□ -2.4
SKP1-207ENST00000520417 UQCR10Q9UDW1 63 aa0.08□□□□□ -2.4
SKP1-207ENST00000520417 GNG8Q9UK08 70 aa0.08□□□□□ -2.4
SKP1-207ENST00000520417 STAB1Q9NY15 2570 aa0.08□□□□□ -2.4
SKP1-207ENST00000520417 CSMD3Q7Z407 3707 aa0.08□□□□□ -2.4
SKP1-207ENST00000520417 ERCC6L2Q5T890 1561 aa0.07□□□□□ -2.4
SKP1-207ENST00000520417 WNK2Q9Y3S1 2297 aa0.07□□□□□ -2.4
SKP1-207ENST00000520417 CPSF1Q10570 1443 aaKnown RBP0.07□□□□□ -2.4
SKP1-207ENST00000520417 UBE2L5PA0A1B0GUS4 154 aa0.07□□□□□ -2.4
SKP1-207ENST00000520417 UBE2L3P68036 154 aaKnown RBP0.07□□□□□ -2.4
SKP1-207ENST00000520417 AMELXQ99217 191 aa0.07□□□□□ -2.4
SKP1-207ENST00000520417 DPH3P1Q9H4G8 78 aa0.07□□□□□ -2.4
SKP1-207ENST00000520417 TP53AIP1Q9HCN2 124 aa0.07□□□□□ -2.4
SKP1-207ENST00000520417 DOCK1Q14185 1865 aa0.07□□□□□ -2.4
SKP1-207ENST00000520417 USF3Q68DE3 2245 aa0.06□□□□□ -2.4
SKP1-207ENST00000520417 DOPEY2Q9Y3R5 2298 aa0.06□□□□□ -2.4
SKP1-207ENST00000520417 CORTO00230 105 aa0.06□□□□□ -2.4
SKP1-207ENST00000520417 PPP3R1P63098 170 aa0.06□□□□□ -2.4
SKP1-207ENST00000520417 PIGYQ3MUY2 71 aa0.06□□□□□ -2.4
SKP1-207ENST00000520417 NXT2Q9NPJ8 142 aaKnown RBP0.06□□□□□ -2.4
SKP1-207ENST00000520417 MANBALQ9NQG1 85 aa0.06□□□□□ -2.4
SKP1-207ENST00000520417 IER3IP1Q9Y5U9 82 aa0.06□□□□□ -2.4
SKP1-207ENST00000520417 ARL2-SNX15V9GYD0 113 aa0.06□□□□□ -2.4
SKP1-207ENST00000520417 DCHS2Q6V1P9 2916 aa0.06□□□□□ -2.4
SKP1-207ENST00000520417 PATJQ8NI35 1801 aa0.06□□□□□ -2.4
SKP1-207ENST00000520417 DOCK2Q92608 1830 aa0.06□□□□□ -2.4
SKP1-207ENST00000520417 WNK3Q9BYP7 1800 aa0.06□□□□□ -2.4
SKP1-207ENST00000520417 MBD5Q9P267 1494 aa0.05□□□□□ -2.4
SKP1-207ENST00000520417 FLNCQ14315 2725 aa0.05□□□□□ -2.4
SKP1-207ENST00000520417 TENM4Q6N022 2769 aa0.05□□□□□ -2.4
SKP1-207ENST00000520417 TRBV6-1A0A0K0K1D8 114 aa0.05□□□□□ -2.4
SKP1-207ENST00000520417 MGPP08493 103 aa0.05□□□□□ -2.4
SKP1-207ENST00000520417 IGLC1P0CG04 106 aa0.05□□□□□ -2.4
SKP1-207ENST00000520417 TRAPPC2P0DI81 140 aa0.05□□□□□ -2.4
SKP1-207ENST00000520417 TRAPPC2BP0DI82 140 aa0.05□□□□□ -2.4
SKP1-207ENST00000520417 GNG4P50150 75 aa0.05□□□□□ -2.4
SKP1-207ENST00000520417 MRPS10P82664 201 aaKnown RBP0.05□□□□□ -2.4
SKP1-207ENST00000520417 WHAMMP3Q1A5X7 153 aa0.05□□□□□ -2.4
SKP1-207ENST00000520417 KRTAP20-1Q3LI63 56 aa0.05□□□□□ -2.4
SKP1-207ENST00000520417 SFTA2Q6UW10 78 aa0.05□□□□□ -2.4
SKP1-207ENST00000520417 FDCSPQ8NFU4 85 aa0.05□□□□□ -2.4
SKP1-207ENST00000520417 LINC00472Q9H8W2 130 aa0.05□□□□□ -2.4
SKP1-207ENST00000520417 PLXNB2O15031 1838 aa0.05□□□□□ -2.4
SKP1-207ENST00000520417 ZNF236Q9UL36 1845 aa0.05□□□□□ -2.4
SKP1-207ENST00000520417 CHD6Q8TD26 2715 aa0.05□□□□□ -2.4
SKP1-207ENST00000520417 PTPN13Q12923 2485 aa0.05□□□□□ -2.4
SKP1-207ENST00000520417 PXDNQ92626 1479 aa0.04□□□□□ -2.4
SKP1-207ENST00000520417 SIPA1L3O60292 1781 aaPredicted RBP0.04□□□□□ -2.4
SKP1-207ENST00000520417 FOCADQ5VW36 1801 aa0.04□□□□□ -2.4
SKP1-207ENST00000520417 VWFP04275 2813 aa0.04□□□□□ -2.4
SKP1-207ENST00000520417 ABCA13Q86UQ4 5058 aa0.04□□□□□ -2.4
SKP1-207ENST00000520417 SPRR1AP35321 89 aa0.04□□□□□ -2.4
SKP1-207ENST00000520417 SNCAP37840 140 aa0.04□□□□□ -2.4
SKP1-207ENST00000520417 PRDM2Q13029 1718 aa0.04□□□□□ -2.4
SKP1-207ENST00000520417 MYO7BQ6PIF6 2116 aa0.04□□□□□ -2.4
SKP1-207ENST00000520417 CACNA1AO00555 2505 aa0.04□□□□□ -2.4
SKP1-207ENST00000520417 HMCN2Q8NDA2 5059 aa0.04□□□□□ -2.4
SKP1-207ENST00000520417 SHANK2Q9UPX8 1470 aa0.03□□□□□ -2.4
SKP1-207ENST00000520417 ATP5EP56381 51 aaPredicted RBP0.03□□□□□ -2.4
SKP1-207ENST00000520417 Q5VSD8 79 aa0.03□□□□□ -2.4
SKP1-207ENST00000520417 GTF2H5Q6ZYL4 71 aa0.03□□□□□ -2.4
SKP1-207ENST00000520417 TMEM263Q8WUH6 116 aaKnown RBP0.03□□□□□ -2.4
SKP1-207ENST00000520417 TMEM203Q969S6 136 aa0.03□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms