RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 LINC01587Q99440 93 aa4.03□□□□□ -1.76
PABPC1-207ENST00000518716 NOP10Q9NPE3 64 aaKnown RBP4.03□□□□□ -1.76
PABPC1-207ENST00000518716 ZNF331Q9NQX6 463 aaPredicted RBP4.03□□□□□ -1.76
PABPC1-207ENST00000518716 MSRB1Q9NZV6 116 aa4.03□□□□□ -1.76
PABPC1-207ENST00000518716 TRAV12-2A0A075B6T6 113 aa4.02□□□□□ -1.77
PABPC1-207ENST00000518716 IGKV1OR2-108A0A075B7D4 117 aa4.02□□□□□ -1.77
PABPC1-207ENST00000518716 TRBV7-6A0A0J9YX20 115 aa4.02□□□□□ -1.77
PABPC1-207ENST00000518716 C3orf85A0A1B0GTC6 90 aa4.02□□□□□ -1.77
PABPC1-207ENST00000518716 PLA2G10O15496 165 aa4.02□□□□□ -1.77
PABPC1-207ENST00000518716 HYPMO75409 117 aa4.02□□□□□ -1.77
PABPC1-207ENST00000518716 SNCGO76070 127 aa4.02□□□□□ -1.77
PABPC1-207ENST00000518716 CRYGAP11844 174 aa4.02□□□□□ -1.77
PABPC1-207ENST00000518716 FABP2P12104 132 aa4.02□□□□□ -1.77
PABPC1-207ENST00000518716 HERVK_113P63121 156 aa4.02□□□□□ -1.77
PABPC1-207ENST00000518716 PIK3CD-AS1Q5SR53 167 aa4.02□□□□□ -1.77
PABPC1-207ENST00000518716 LINC01545Q5VT33 79 aa4.02□□□□□ -1.77
PABPC1-207ENST00000518716 NFE4Q86UQ8 179 aa4.02□□□□□ -1.77
PABPC1-207ENST00000518716 C10orf126Q8N4M7 172 aa4.02□□□□□ -1.77
PABPC1-207ENST00000518716 C3orf22Q8N5N4 141 aa4.02□□□□□ -1.77
PABPC1-207ENST00000518716 OR10G8Q8NGN5 311 aa4.02□□□□□ -1.77
PABPC1-207ENST00000518716 TMEM263Q8WUH6 116 aaKnown RBP4.02□□□□□ -1.77
PABPC1-207ENST00000518716 S100A16Q96FQ6 103 aaKnown RBP4.02□□□□□ -1.77
PABPC1-207ENST00000518716 GNB1LQ9BYB4 327 aa4.02□□□□□ -1.77
PABPC1-207ENST00000518716 Q9HAA7 133 aa4.02□□□□□ -1.77
PABPC1-207ENST00000518716 NAP1L6A6NFF2 107 aa4.01□□□□□ -1.77
PABPC1-207ENST00000518716 M0R2P5 195 aa4.01□□□□□ -1.77
PABPC1-207ENST00000518716 DUSP14O95147 198 aaKnown RBP4.01□□□□□ -1.77
PABPC1-207ENST00000518716 TPT1P13693 172 aaKnown RBP4.01□□□□□ -1.77
PABPC1-207ENST00000518716 RIGQ13278 110 aa4.01□□□□□ -1.77
PABPC1-207ENST00000518716 SP6Q3SY56 376 aa4.01□□□□□ -1.77
PABPC1-207ENST00000518716 TDRG1Q3Y452 100 aa4.01□□□□□ -1.77
PABPC1-207ENST00000518716 UBE2NLQ5JXB2 153 aa4.01□□□□□ -1.77
PABPC1-207ENST00000518716 C9orf153Q5TBE3 101 aa4.01□□□□□ -1.77
PABPC1-207ENST00000518716 MORN5Q5VZ52 161 aa4.01□□□□□ -1.77
PABPC1-207ENST00000518716 Q75L30 129 aa4.01□□□□□ -1.77
PABPC1-207ENST00000518716 EXOC3-AS1Q8N2X6 119 aa4.01□□□□□ -1.77
PABPC1-207ENST00000518716 LOC107984640A0A0U1RRK4 108 aa4□□□□□ -1.77
PABPC1-207ENST00000518716 NXPH4O95158 308 aa4□□□□□ -1.77
PABPC1-207ENST00000518716 IL5P05113 134 aa4□□□□□ -1.77
PABPC1-207ENST00000518716 LINC00869P0C866 280 aa4□□□□□ -1.77
PABPC1-207ENST00000518716 PYYP10082 97 aa4□□□□□ -1.77
PABPC1-207ENST00000518716 PSMB2P49721 201 aa4□□□□□ -1.77
PABPC1-207ENST00000518716 DAZ2Q13117 558 aaKnown RBP4□□□□□ -1.77
PABPC1-207ENST00000518716 ELOBQ15370 118 aa4□□□□□ -1.77
PABPC1-207ENST00000518716 Q6ZVH6 145 aa4□□□□□ -1.77
PABPC1-207ENST00000518716 DAZ4Q86SG3 579 aaKnown RBP4□□□□□ -1.77
PABPC1-207ENST00000518716 RNF182Q8N6D2 247 aa4□□□□□ -1.77
PABPC1-207ENST00000518716 OR10P1Q8NGE3 313 aa4□□□□□ -1.77
PABPC1-207ENST00000518716 OR8A1Q8NGG7 326 aa4□□□□□ -1.77
PABPC1-207ENST00000518716 DPH3Q96FX2 82 aa4□□□□□ -1.77
PABPC1-207ENST00000518716 C2orf50Q96LR7 162 aa4□□□□□ -1.77
PABPC1-207ENST00000518716 TRGV9Q99603 122 aa4□□□□□ -1.77
PABPC1-207ENST00000518716 SOSTQ9BQB4 213 aa4□□□□□ -1.77
PABPC1-207ENST00000518716 DAZ3Q9NR90 486 aaKnown RBP4□□□□□ -1.77
PABPC1-207ENST00000518716 PYGO1Q9Y3Y4 419 aa4□□□□□ -1.77
PABPC1-207ENST00000518716 TRAV8-1A0A0A6YYK1 113 aa3.99□□□□□ -1.77
PABPC1-207ENST00000518716 A8MWV9 139 aa3.99□□□□□ -1.77
PABPC1-207ENST00000518716 C17orf112F2Z3M2 114 aa3.99□□□□□ -1.77
PABPC1-207ENST00000518716 H3BMG7 143 aa3.99□□□□□ -1.77
PABPC1-207ENST00000518716 GABARAPH6UMI1 98 aa3.99□□□□□ -1.77
PABPC1-207ENST00000518716 NDUFS5O43920 106 aa3.99□□□□□ -1.77
PABPC1-207ENST00000518716 SSSCA1O60232 199 aa3.99□□□□□ -1.77
PABPC1-207ENST00000518716 NDUFB6O95139 128 aa3.99□□□□□ -1.77
PABPC1-207ENST00000518716 TRGC2P03986 189 aa3.99□□□□□ -1.77
PABPC1-207ENST00000518716 CXCL5P42830 114 aa3.99□□□□□ -1.77
PABPC1-207ENST00000518716 HINT1P49773 126 aaPredicted RBP3.99□□□□□ -1.77
PABPC1-207ENST00000518716 FOXA3P55318 350 aaPredicted RBP3.99□□□□□ -1.77
PABPC1-207ENST00000518716 LYZP61626 148 aa3.99□□□□□ -1.77
PABPC1-207ENST00000518716 MRPS36P82909 103 aaKnown RBP3.99□□□□□ -1.77
PABPC1-207ENST00000518716 SPATA45Q537H7 98 aa3.99□□□□□ -1.77
PABPC1-207ENST00000518716 PYDC2Q56P42 97 aa3.99□□□□□ -1.77
PABPC1-207ENST00000518716 C10orf25Q5T742 122 aa3.99□□□□□ -1.77
PABPC1-207ENST00000518716 LYPD5Q6UWN5 251 aa3.99□□□□□ -1.77
PABPC1-207ENST00000518716 DPPA3Q6W0C5 159 aa3.99□□□□□ -1.77
PABPC1-207ENST00000518716 Q6ZTI0 123 aa3.99□□□□□ -1.77
PABPC1-207ENST00000518716 NOTCH2NLQ7Z3S9 236 aa3.99□□□□□ -1.77
PABPC1-207ENST00000518716 C11orf72Q8NBR9 251 aa3.99□□□□□ -1.77
PABPC1-207ENST00000518716 OR10AG1Q8NH19 301 aa3.99□□□□□ -1.77
PABPC1-207ENST00000518716 KCNS1Q96KK3 526 aa3.99□□□□□ -1.77
PABPC1-207ENST00000518716 PXMP4Q9Y6I8 212 aa3.99□□□□□ -1.77
PABPC1-207ENST00000518716 SMIM26A0A096LP01 95 aa3.98□□□□□ -1.77
PABPC1-207ENST00000518716 IGLV5-52A0A0A0MRZ9 124 aa3.98□□□□□ -1.77
PABPC1-207ENST00000518716 FAM24AA6NFZ4 105 aa3.98□□□□□ -1.77
PABPC1-207ENST00000518716 ZFP92A6NM28 416 aa3.98□□□□□ -1.77
PABPC1-207ENST00000518716 AGPAT2O15120 278 aa3.98□□□□□ -1.77
PABPC1-207ENST00000518716 ZNF324O75467 553 aaPredicted RBP3.98□□□□□ -1.77
PABPC1-207ENST00000518716 TRACP01848 142 aa3.98□□□□□ -1.77
PABPC1-207ENST00000518716 MT1HL1P0DM35 61 aa3.98□□□□□ -1.77
PABPC1-207ENST00000518716 SLC25A6P12236 298 aa3.98□□□□□ -1.77
PABPC1-207ENST00000518716 HTN1P15515 57 aa3.98□□□□□ -1.77
PABPC1-207ENST00000518716 KRTAP10-5P60370 271 aa3.98□□□□□ -1.77
PABPC1-207ENST00000518716 BVES-AS1Q5T3Y7 98 aa3.98□□□□□ -1.77
PABPC1-207ENST00000518716 GFI1BQ5VTD9 330 aa3.98□□□□□ -1.77
PABPC1-207ENST00000518716 SLC25A34Q6PIV7 304 aa3.98□□□□□ -1.77
PABPC1-207ENST00000518716 LINC00467Q9BRT7 94 aa3.98□□□□□ -1.77
PABPC1-207ENST00000518716 PAXXQ9BUH6 204 aa3.98□□□□□ -1.77
PABPC1-207ENST00000518716 SPCS1Q9Y6A9 102 aa3.98□□□□□ -1.77
PABPC1-207ENST00000518716 TRAV9-2A0A087WT02 112 aa3.97□□□□□ -1.77
PABPC1-207ENST00000518716 TRAV13-1A0A0B4J241 112 aa3.97□□□□□ -1.77
PABPC1-207ENST00000518716 PGPA6NDG6 321 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms