RNA–Protein interactions for RNA: ENST00000517402.1

HOXA11-202, Transcript of homeobox A11, humanhuman

TSL 1 (best)

Gene HOXA11, Length 2,137 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11-202ENST00000517402 TRGV4A0A0C4DH28 118 aa13.96□□□□□ -0.18
HOXA11-202ENST00000517402 SMIM13P0DJ93 91 aa13.96□□□□□ -0.18
HOXA11-202ENST00000517402 DEFB130BP0DP73 79 aa13.96□□□□□ -0.18
HOXA11-202ENST00000517402 DEFB130AP0DP74 79 aa13.96□□□□□ -0.18
HOXA11-202ENST00000517402 LGALS3P17931 250 aaKnown RBP13.95□□□□□ -0.18
HOXA11-202ENST00000517402 CRYBA4P53673 196 aa13.95□□□□□ -0.18
HOXA11-202ENST00000517402 X6R8D5 127 aa13.95□□□□□ -0.18
HOXA11-202ENST00000517402 DAZ4Q86SG3 579 aaKnown RBP13.94□□□□□ -0.18
HOXA11-202ENST00000517402 DAZ3Q9NR90 486 aaKnown RBP13.94□□□□□ -0.18
HOXA11-202ENST00000517402 TRAV8-3A0A0A6YYJ7 113 aa13.94□□□□□ -0.18
HOXA11-202ENST00000517402 A0A0J9YY99 117 aa13.94□□□□□ -0.18
HOXA11-202ENST00000517402 LEPROTO15243 131 aa13.93□□□□□ -0.18
HOXA11-202ENST00000517402 FHL2Q14192 279 aa13.93□□□□□ -0.18
HOXA11-202ENST00000517402 DGAT2L7PQ6IED9 249 aa13.93□□□□□ -0.18
HOXA11-202ENST00000517402 TRBV6-4A0A1B0GX49 114 aa13.92□□□□□ -0.18
HOXA11-202ENST00000517402 SRSF9Q13242 221 aaKnown RBP eCLIP13.92□□□□□ -0.18
HOXA11-202ENST00000517402 DEFB135Q30KP9 77 aa13.92□□□□□ -0.18
HOXA11-202ENST00000517402 TINCRA0A1B0GVN0 87 aa13.91□□□□□ -0.18
HOXA11-202ENST00000517402 IGHV3-30-3P0DP02 117 aa13.91□□□□□ -0.18
HOXA11-202ENST00000517402 A8MZ25 164 aa13.9□□□□□ -0.18
HOXA11-202ENST00000517402 UBE2D1P51668 147 aa13.9□□□□□ -0.18
HOXA11-202ENST00000517402 C12orf74Q32Q52 190 aa13.9□□□□□ -0.18
HOXA11-202ENST00000517402 SBSPONQ8IVN8 264 aa13.9□□□□□ -0.18
HOXA11-202ENST00000517402 TIMM21Q9BVV7 248 aa13.9□□□□□ -0.18
HOXA11-202ENST00000517402 A0A1W2PPM0 123 aa13.9□□□□□ -0.18
HOXA11-202ENST00000517402 DEFB4AO15263 64 aa13.89□□□□□ -0.19
HOXA11-202ENST00000517402 SPINK8P0C7L1 97 aa13.89□□□□□ -0.19
HOXA11-202ENST00000517402 SAMD5Q5TGI4 173 aa13.88□□□□□ -0.19
HOXA11-202ENST00000517402 C10orf126Q8N4M7 172 aa13.88□□□□□ -0.19
HOXA11-202ENST00000517402 GAGE10A6NGK3 116 aa13.87□□□□□ -0.19
HOXA11-202ENST00000517402 OR5A1Q8NGJ0 315 aa13.87□□□□□ -0.19
HOXA11-202ENST00000517402 KIR2DL5BQ8NHK3 375 aa13.87□□□□□ -0.19
HOXA11-202ENST00000517402 GEMIN7Q9H840 131 aaKnown RBP13.87□□□□□ -0.19
HOXA11-202ENST00000517402 CDKN2A-AS1Q9UH64 79 aa13.87□□□□□ -0.19
HOXA11-202ENST00000517402 FBN1P35555 2871 aaKnown RBP13.87□□□□□ -0.19
HOXA11-202ENST00000517402 CIDEAO60543 219 aa13.86□□□□□ -0.19
HOXA11-202ENST00000517402 COX6A2Q02221 97 aa13.86□□□□□ -0.19
HOXA11-202ENST00000517402 LINC00612Q8N6U2 182 aa13.86□□□□□ -0.19
HOXA11-202ENST00000517402 STAB1Q9NY15 2570 aa13.86□□□□□ -0.19
HOXA11-202ENST00000517402 IGHV1-58A0A0C4DH39 117 aa13.85□□□□□ -0.19
HOXA11-202ENST00000517402 WFDC9Q8NEX5 89 aa13.85□□□□□ -0.19
HOXA11-202ENST00000517402 TMEM243Q9BU79 118 aa13.85□□□□□ -0.19
HOXA11-202ENST00000517402 GTSF1LQ9H1H1 148 aa13.85□□□□□ -0.19
HOXA11-202ENST00000517402 TRAV13-1A0A0B4J241 112 aa13.85□□□□□ -0.19
HOXA11-202ENST00000517402 FAM222AQ5U5X8 452 aa13.85□□□□□ -0.19
HOXA11-202ENST00000517402 A0A1B0GWB2 263 aa13.84□□□□□ -0.19
HOXA11-202ENST00000517402 IGLL5B9A064 214 aa13.84□□□□□ -0.19
HOXA11-202ENST00000517402 K7EP34 96 aa13.84□□□□□ -0.19
HOXA11-202ENST00000517402 UBE2L6O14933 153 aa13.84□□□□□ -0.19
HOXA11-202ENST00000517402 IGHV3-30P01768 117 aa13.84□□□□□ -0.19
HOXA11-202ENST00000517402 IGHV3-30-5P0DP03 117 aa13.84□□□□□ -0.19
HOXA11-202ENST00000517402 SPANXB1Q9NS25 103 aaPredicted RBP13.84□□□□□ -0.19
HOXA11-202ENST00000517402 LINC00242Q5T6M2 205 aa13.84□□□□□ -0.19
HOXA11-202ENST00000517402 VSIG2Q96IQ7 327 aa13.84□□□□□ -0.19
HOXA11-202ENST00000517402 CDC42SE2Q9NRR3 84 aa13.84□□□□□ -0.19
HOXA11-202ENST00000517402 SPCS1Q9Y6A9 102 aa13.84□□□□□ -0.19
HOXA11-202ENST00000517402 SMIM9A6NGZ8 99 aa13.83□□□□□ -0.2
HOXA11-202ENST00000517402 FABP2P12104 132 aa13.83□□□□□ -0.2
HOXA11-202ENST00000517402 CSDC2Q9Y534 153 aaKnown RBP13.83□□□□□ -0.2
HOXA11-202ENST00000517402 ANK2Q01484 3957 aa13.83□□□□□ -0.2
HOXA11-202ENST00000517402 KRTAP24-1Q3LI83 254 aa13.82□□□□□ -0.2
HOXA11-202ENST00000517402 A0A0J9YXY3 114 aa13.82□□□□□ -0.2
HOXA11-202ENST00000517402 APOC4P55056 127 aa13.82□□□□□ -0.2
HOXA11-202ENST00000517402 IGLV5-45A0A087WSX0 123 aa13.81□□□□□ -0.2
HOXA11-202ENST00000517402 GAGE6Q13070 117 aa13.81□□□□□ -0.2
HOXA11-202ENST00000517402 GTF2H5Q6ZYL4 71 aa13.81□□□□□ -0.2
HOXA11-202ENST00000517402 PKD1L1Q8TDX9 2849 aa13.81□□□□□ -0.2
HOXA11-202ENST00000517402 IGHV4-28A0A0C4DH34 117 aa13.81□□□□□ -0.2
HOXA11-202ENST00000517402 APOMO95445 188 aa13.81□□□□□ -0.2
HOXA11-202ENST00000517402 IGHV4-30-4P0DP06 118 aa13.81□□□□□ -0.2
HOXA11-202ENST00000517402 NDUFA12Q9UI09 145 aa13.81□□□□□ -0.2
HOXA11-202ENST00000517402 TRBV6-8A0A0A6YYG3 113 aa13.8□□□□□ -0.2
HOXA11-202ENST00000517402 TMEM238LA0A1B0GVL6 79 aa13.8□□□□□ -0.2
HOXA11-202ENST00000517402 A6NJY4 79 aa13.8□□□□□ -0.2
HOXA11-202ENST00000517402 TIRAPP58753 221 aa13.8□□□□□ -0.2
HOXA11-202ENST00000517402 GYPEP15421 78 aa13.79□□□□□ -0.2
HOXA11-202ENST00000517402 OXLD1Q5BKU9 147 aa13.79□□□□□ -0.2
HOXA11-202ENST00000517402 CMYA5Q8N3K9 4069 aa13.79□□□□□ -0.2
HOXA11-202ENST00000517402 WIPF1O43516 503 aa13.79□□□□□ -0.2
HOXA11-202ENST00000517402 HERVK_113P63121 156 aa13.79□□□□□ -0.2
HOXA11-202ENST00000517402 PGPEP1Q9NXJ5 209 aa13.79□□□□□ -0.2
HOXA11-202ENST00000517402 A0A096LPF7 62 aa13.78□□□□□ -0.2
HOXA11-202ENST00000517402 TMEM101Q96IK0 257 aa13.78□□□□□ -0.2
HOXA11-202ENST00000517402 CHCHD5Q9BSY4 110 aa13.78□□□□□ -0.2
HOXA11-202ENST00000517402 CELA1Q9UNI1 258 aa13.78□□□□□ -0.2
HOXA11-202ENST00000517402 IGLV4-60A0A075B6I1 120 aa13.77□□□□□ -0.21
HOXA11-202ENST00000517402 LITAFQ99732 161 aa13.77□□□□□ -0.21
HOXA11-202ENST00000517402 IGKV3OR2-268A0A0C4DH90 116 aa13.76□□□□□ -0.21
HOXA11-202ENST00000517402 LYRM9A8MSI8 78 aa13.76□□□□□ -0.21
HOXA11-202ENST00000517402 ZFAND6Q6FIF0 208 aa13.76□□□□□ -0.21
HOXA11-202ENST00000517402 TMEM238C9JI98 176 aa13.76□□□□□ -0.21
HOXA11-202ENST00000517402 SFTA2Q6UW10 78 aa13.76□□□□□ -0.21
HOXA11-202ENST00000517402 FAM19A3Q7Z5A8 133 aa13.76□□□□□ -0.21
HOXA11-202ENST00000517402 Q8NAQ8 132 aa13.76□□□□□ -0.21
HOXA11-202ENST00000517402 CFC1BP0CG36 223 aa13.75□□□□□ -0.21
HOXA11-202ENST00000517402 CFC1P0CG37 223 aa13.75□□□□□ -0.21
HOXA11-202ENST00000517402 MUSTN1Q8IVN3 82 aa13.75□□□□□ -0.21
HOXA11-202ENST00000517402 PRO0255Q9UI72 69 aa13.75□□□□□ -0.21
HOXA11-202ENST00000517402 SMIM1B2RUZ4 78 aa13.75□□□□□ -0.21
HOXA11-202ENST00000517402 ADAMTSL4-AS1Q5T5F5 129 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms