RNA–Protein interactions for RNA: ENST00000515752.5

SDHA-218, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5

Gene SDHA, Length 1,809 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-218ENST00000515752 Q6ZUT4 128 aa10.84□□□□□ -0.67
SDHA-218ENST00000515752 SRSF9Q13242 221 aaKnown RBP eCLIP10.84□□□□□ -0.67
SDHA-218ENST00000515752 SPATA3Q8NHX4 192 aa10.84□□□□□ -0.67
SDHA-218ENST00000515752 TMEM243Q9BU79 118 aa10.84□□□□□ -0.67
SDHA-218ENST00000515752 GEMIN7Q9H840 131 aaKnown RBP10.84□□□□□ -0.67
SDHA-218ENST00000515752 SPANXB1Q9NS25 103 aaPredicted RBP10.84□□□□□ -0.67
SDHA-218ENST00000515752 UBE2D1P51668 147 aa10.83□□□□□ -0.68
SDHA-218ENST00000515752 NTM-AS1Q6ZSK4 140 aa10.83□□□□□ -0.68
SDHA-218ENST00000515752 SBSPONQ8IVN8 264 aa10.83□□□□□ -0.68
SDHA-218ENST00000515752 A0A0J9YY99 117 aa10.82□□□□□ -0.68
SDHA-218ENST00000515752 UBE2L6O14933 153 aa10.82□□□□□ -0.68
SDHA-218ENST00000515752 TMEM101Q96IK0 257 aa10.82□□□□□ -0.68
SDHA-218ENST00000515752 FAM19A3Q7Z5A8 133 aa10.81□□□□□ -0.68
SDHA-218ENST00000515752 OR5A1Q8NGJ0 315 aa10.81□□□□□ -0.68
SDHA-218ENST00000515752 NHP2Q9NX24 153 aaKnown RBP10.81□□□□□ -0.68
SDHA-218ENST00000515752 IGHV1-58A0A0C4DH39 117 aa10.81□□□□□ -0.68
SDHA-218ENST00000515752 CCL25O15444 150 aa10.81□□□□□ -0.68
SDHA-218ENST00000515752 DEFB130BP0DP73 79 aa10.81□□□□□ -0.68
SDHA-218ENST00000515752 DEFB130AP0DP74 79 aa10.81□□□□□ -0.68
SDHA-218ENST00000515752 TSPEAR-AS2P59090 65 aa10.81□□□□□ -0.68
SDHA-218ENST00000515752 HERVK_113P63121 156 aa10.81□□□□□ -0.68
SDHA-218ENST00000515752 AMMECR1LQ6DCA0 310 aa10.81□□□□□ -0.68
SDHA-218ENST00000515752 GTF2H5Q6ZYL4 71 aa10.81□□□□□ -0.68
SDHA-218ENST00000515752 IGLV5-45A0A087WSX0 123 aa10.8□□□□□ -0.68
SDHA-218ENST00000515752 A0A1B0GWB2 263 aa10.8□□□□□ -0.68
SDHA-218ENST00000515752 H3BUT2 72 aa10.8□□□□□ -0.68
SDHA-218ENST00000515752 RNASE13Q5GAN3 156 aaKnown RBP10.8□□□□□ -0.68
SDHA-218ENST00000515752 LINC00694P0DN24 101 aa10.79□□□□□ -0.68
SDHA-218ENST00000515752 IGHV3-30-3P0DP02 117 aa10.79□□□□□ -0.68
SDHA-218ENST00000515752 RAB37Q96AX2 223 aa10.79□□□□□ -0.68
SDHA-218ENST00000515752 NOTCH3Q9UM47 2321 aa10.79□□□□□ -0.68
SDHA-218ENST00000515752 MIFP14174 115 aa10.79□□□□□ -0.68
SDHA-218ENST00000515752 C12orf74Q32Q52 190 aa10.79□□□□□ -0.68
SDHA-218ENST00000515752 VSIG2Q96IQ7 327 aa10.79□□□□□ -0.68
SDHA-218ENST00000515752 CDC42SE2Q9NRR3 84 aa10.79□□□□□ -0.68
SDHA-218ENST00000515752 PRO0255Q9UI72 69 aa10.79□□□□□ -0.68
SDHA-218ENST00000515752 TRBV6-8A0A0A6YYG3 113 aa10.78□□□□□ -0.68
SDHA-218ENST00000515752 GAGE10A6NGK3 116 aa10.78□□□□□ -0.68
SDHA-218ENST00000515752 K7EP13 123 aa10.78□□□□□ -0.68
SDHA-218ENST00000515752 FABP2P12104 132 aa10.78□□□□□ -0.68
SDHA-218ENST00000515752 SAMD5Q5TGI4 173 aa10.78□□□□□ -0.68
SDHA-218ENST00000515752 A0A1W2PPM0 123 aa10.77□□□□□ -0.68
SDHA-218ENST00000515752 DEFB135Q30KP9 77 aa10.77□□□□□ -0.68
SDHA-218ENST00000515752 LOC100131303A0A0U1RQF7 123 aa10.77□□□□□ -0.69
SDHA-218ENST00000515752 TMEM238C9JI98 176 aa10.77□□□□□ -0.69
SDHA-218ENST00000515752 FAM222AQ5U5X8 452 aa10.77□□□□□ -0.69
SDHA-218ENST00000515752 SHISA2Q6UWI4 295 aa10.76□□□□□ -0.69
SDHA-218ENST00000515752 TEP1Q99973 2627 aaKnown RBP10.75□□□□□ -0.69
SDHA-218ENST00000515752 IGHV3-64A0A075B6Q5 118 aa10.75□□□□□ -0.69
SDHA-218ENST00000515752 IGHV4-30-4P0DP06 118 aa10.75□□□□□ -0.69
SDHA-218ENST00000515752 LINC00242Q5T6M2 205 aa10.75□□□□□ -0.69
SDHA-218ENST00000515752 F8P00451 2351 aa10.75□□□□□ -0.69
SDHA-218ENST00000515752 IGHV3-30P01768 117 aa10.74□□□□□ -0.69
SDHA-218ENST00000515752 IGHV3-30-5P0DP03 117 aa10.74□□□□□ -0.69
SDHA-218ENST00000515752 KRTAP24-1Q3LI83 254 aa10.74□□□□□ -0.69
SDHA-218ENST00000515752 ATP6V0E2Q8NHE4 81 aa10.74□□□□□ -0.69
SDHA-218ENST00000515752 RNF183Q96D59 192 aa10.74□□□□□ -0.69
SDHA-218ENST00000515752 CDKN2A-AS1Q9UH64 79 aa10.74□□□□□ -0.69
SDHA-218ENST00000515752 NDUFA12Q9UI09 145 aa10.74□□□□□ -0.69
SDHA-218ENST00000515752 IGHV4-28A0A0C4DH34 117 aa10.74□□□□□ -0.69
SDHA-218ENST00000515752 K7EP34 96 aa10.74□□□□□ -0.69
SDHA-218ENST00000515752 K7ERJ3 54 aa10.74□□□□□ -0.69
SDHA-218ENST00000515752 ZFAND6Q6FIF0 208 aa10.74□□□□□ -0.69
SDHA-218ENST00000515752 C3orf56Q8N813 242 aa10.74□□□□□ -0.69
SDHA-218ENST00000515752 ATRQ13535 2644 aa10.74□□□□□ -0.69
SDHA-218ENST00000515752 TRAV8-3A0A0A6YYJ7 113 aa10.73□□□□□ -0.69
SDHA-218ENST00000515752 A0A0J9YXY3 114 aa10.73□□□□□ -0.69
SDHA-218ENST00000515752 IGLL5B9A064 214 aa10.73□□□□□ -0.69
SDHA-218ENST00000515752 GYPEP15421 78 aa10.73□□□□□ -0.69
SDHA-218ENST00000515752 TRAV13-1A0A0B4J241 112 aa10.72□□□□□ -0.69
SDHA-218ENST00000515752 TEX48A0A1B0GUV7 120 aa10.72□□□□□ -0.69
SDHA-218ENST00000515752 SPINK8P0C7L1 97 aa10.72□□□□□ -0.69
SDHA-218ENST00000515752 DAD1P61803 113 aa10.72□□□□□ -0.69
SDHA-218ENST00000515752 RPL24P83731 157 aaKnown RBP10.72□□□□□ -0.69
SDHA-218ENST00000515752 C10orf126Q8N4M7 172 aa10.72□□□□□ -0.69
SDHA-218ENST00000515752 CHCHD5Q9BSY4 110 aa10.72□□□□□ -0.69
SDHA-218ENST00000515752 SPCS1Q9Y6A9 102 aa10.72□□□□□ -0.69
SDHA-218ENST00000515752 TENM1Q9UKZ4 2725 aa10.72□□□□□ -0.69
SDHA-218ENST00000515752 IGLV5-39A0A0G2JS06 123 aa10.72□□□□□ -0.69
SDHA-218ENST00000515752 PAX4O43316 350 aa10.72□□□□□ -0.69
SDHA-218ENST00000515752 SPART-AS1P0CW21 52 aa10.72□□□□□ -0.69
SDHA-218ENST00000515752 Q8NAQ8 132 aa10.72□□□□□ -0.69
SDHA-218ENST00000515752 A8MZ25 164 aa10.71□□□□□ -0.69
SDHA-218ENST00000515752 TIMM17BO60830 172 aa10.71□□□□□ -0.69
SDHA-218ENST00000515752 FLNBO75369 2602 aaKnown RBP10.71□□□□□ -0.7
SDHA-218ENST00000515752 VWFP04275 2813 aa10.7□□□□□ -0.7
SDHA-218ENST00000515752 ATP5G1P05496 136 aa10.7□□□□□ -0.7
SDHA-218ENST00000515752 COX6A2Q02221 97 aa10.7□□□□□ -0.7
SDHA-218ENST00000515752 GAGE6Q13070 117 aa10.7□□□□□ -0.7
SDHA-218ENST00000515752 NDUFA1O15239 70 aa10.7□□□□□ -0.7
SDHA-218ENST00000515752 NAA38Q9BRA0 125 aaKnown RBP10.7□□□□□ -0.7
SDHA-218ENST00000515752 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.69□□□□□ -0.7
SDHA-218ENST00000515752 A0A1B0GUV1 79 aa10.69□□□□□ -0.7
SDHA-218ENST00000515752 EGFEM1PQ0D2K5 195 aa10.69□□□□□ -0.7
SDHA-218ENST00000515752 CIRBPQ14011 172 aaKnown RBP10.69□□□□□ -0.7
SDHA-218ENST00000515752 TRAV26-1A0A087WT03 109 aa10.68□□□□□ -0.7
SDHA-218ENST00000515752 SH2D6Q7Z4S9 175 aa10.68□□□□□ -0.7
SDHA-218ENST00000515752 SPANXDQ9BXN6 97 aa10.68□□□□□ -0.7
SDHA-218ENST00000515752 SPANXCQ9NY87 97 aa10.68□□□□□ -0.7
SDHA-218ENST00000515752 LYRM7Q5U5X0 104 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms