RNA–Protein interactions for RNA: ENST00000514738.5

CDH6-205, Transcript of cadherin 6, humanhuman

TSL 1 (best) BASIC

Gene CDH6, Length 2,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-205ENST00000514738 DEFB133Q30KQ1 61 aa11.54□□□□□ -0.56
CDH6-205ENST00000514738 LINC01560Q8TB33 94 aa11.54□□□□□ -0.56
CDH6-205ENST00000514738 ATP11AUNQ6ZP68 121 aa11.53□□□□□ -0.56
CDH6-205ENST00000514738 GAFA1Q96PS6 74 aa11.53□□□□□ -0.56
CDH6-205ENST00000514738 MUC4Q99102 2169 aa11.53□□□□□ -0.56
CDH6-205ENST00000514738 ESM1Q9NQ30 184 aa11.53□□□□□ -0.56
CDH6-205ENST00000514738 PRB3Q04118 309 aaPredicted RBP11.53□□□□□ -0.56
CDH6-205ENST00000514738 C7orf65Q6ZTY9 151 aa11.53□□□□□ -0.56
CDH6-205ENST00000514738 DEFB108BQ8NET1 73 aa11.53□□□□□ -0.56
CDH6-205ENST00000514738 DIRC1Q969H9 104 aa11.53□□□□□ -0.56
CDH6-205ENST00000514738 IGHV3OR16-8A0A075B7F1 116 aa11.52□□□□□ -0.56
CDH6-205ENST00000514738 CCL3L1P16619 93 aa11.52□□□□□ -0.56
CDH6-205ENST00000514738 UBE2AP49459 152 aa11.52□□□□□ -0.57
CDH6-205ENST00000514738 F8W735 103 aaPredicted RBP11.51□□□□□ -0.57
CDH6-205ENST00000514738 CXCL6P80162 114 aa11.51□□□□□ -0.57
CDH6-205ENST00000514738 Q5VV11 94 aa11.51□□□□□ -0.57
CDH6-205ENST00000514738 PRB1P04280 392 aa11.5□□□□□ -0.57
CDH6-205ENST00000514738 CDKN2A-AS1Q9UH64 79 aa11.5□□□□□ -0.57
CDH6-205ENST00000514738 BPY2O14599 106 aa11.5□□□□□ -0.57
CDH6-205ENST00000514738 DEFB103AP81534 67 aa11.5□□□□□ -0.57
CDH6-205ENST00000514738 FDCSPQ8NFU4 85 aa11.5□□□□□ -0.57
CDH6-205ENST00000514738 COL27A1Q8IZC6 1860 aaPredicted RBP11.49□□□□□ -0.57
CDH6-205ENST00000514738 IGHV3-38A0A0C4DH36 116 aa11.49□□□□□ -0.57
CDH6-205ENST00000514738 CCL24O00175 119 aa11.49□□□□□ -0.57
CDH6-205ENST00000514738 FAM19A3Q7Z5A8 133 aa11.49□□□□□ -0.57
CDH6-205ENST00000514738 FREM2Q5SZK8 3169 aa11.49□□□□□ -0.57
CDH6-205ENST00000514738 FAM186AA6NE01 2351 aa11.49□□□□□ -0.57
CDH6-205ENST00000514738 PINLYPA6NC86 204 aa11.49□□□□□ -0.57
CDH6-205ENST00000514738 IGKV2-28A0A075B6P5 120 aa11.48□□□□□ -0.57
CDH6-205ENST00000514738 IGKV2D-28P01615 120 aa11.48□□□□□ -0.57
CDH6-205ENST00000514738 TRBV10-1A0A0K0K1A3 114 aa11.48□□□□□ -0.57
CDH6-205ENST00000514738 M0QY20 66 aa11.48□□□□□ -0.57
CDH6-205ENST00000514738 ZFAND2AQ8N6M9 145 aa11.48□□□□□ -0.57
CDH6-205ENST00000514738 LENEPQ9Y5L5 61 aa11.48□□□□□ -0.57
CDH6-205ENST00000514738 HCG22E2RYF7 251 aa11.47□□□□□ -0.57
CDH6-205ENST00000514738 FAM74A4Q5TZK3 123 aa11.47□□□□□ -0.57
CDH6-205ENST00000514738 IGHV3-23P01764 117 aa11.47□□□□□ -0.57
CDH6-205ENST00000514738 HIGD2AQ9BW72 106 aa11.47□□□□□ -0.57
CDH6-205ENST00000514738 LAMA1P25391 3075 aa11.45□□□□□ -0.58
CDH6-205ENST00000514738 MDFIQ99750 246 aa11.45□□□□□ -0.58
CDH6-205ENST00000514738 SORL1Q92673 2214 aa11.45□□□□□ -0.58
CDH6-205ENST00000514738 IGHV3-66A0A0C4DH42 116 aa11.45□□□□□ -0.58
CDH6-205ENST00000514738 CHKB-CPT1BH3BT56 60 aa11.45□□□□□ -0.58
CDH6-205ENST00000514738 URB1O60287 2271 aaKnown RBP11.45□□□□□ -0.58
CDH6-205ENST00000514738 IGHV3-35A0A0C4DH35 117 aa11.44□□□□□ -0.58
CDH6-205ENST00000514738 GNLYP22749 145 aa11.44□□□□□ -0.58
CDH6-205ENST00000514738 DCHS1Q96JQ0 3298 aa11.43□□□□□ -0.58
CDH6-205ENST00000514738 K7EQG2 157 aa11.43□□□□□ -0.58
CDH6-205ENST00000514738 PSCAO43653 123 aa11.43□□□□□ -0.58
CDH6-205ENST00000514738 IGLV5-39A0A0G2JS06 123 aa11.43□□□□□ -0.58
CDH6-205ENST00000514738 SND1-IT1Q9HBX3 110 aa11.42□□□□□ -0.58
CDH6-205ENST00000514738 SPTBN5Q9NRC6 3674 aaKnown RBP11.42□□□□□ -0.58
CDH6-205ENST00000514738 IGLV5-45A0A087WSX0 123 aa11.42□□□□□ -0.58
CDH6-205ENST00000514738 Q6ZQT0 140 aa11.42□□□□□ -0.58
CDH6-205ENST00000514738 LINC00167Q96N53 147 aa11.42□□□□□ -0.58
CDH6-205ENST00000514738 TRIOO75962 3097 aa11.42□□□□□ -0.58
CDH6-205ENST00000514738 IGHV1-2P23083 117 aa11.41□□□□□ -0.58
CDH6-205ENST00000514738 NKAPP1Q8N9T2 125 aa11.41□□□□□ -0.58
CDH6-205ENST00000514738 IGLV11-55A0A075B6I3 123 aa11.4□□□□□ -0.58
CDH6-205ENST00000514738 ZNF843Q8N446 348 aa11.4□□□□□ -0.58
CDH6-205ENST00000514738 OCR1Q9BZK8 76 aa11.4□□□□□ -0.58
CDH6-205ENST00000514738 IGHV3OR16-13A0A075B7E8 117 aa11.39□□□□□ -0.59
CDH6-205ENST00000514738 IGHV3-74A0A0B4J1X5 117 aa11.39□□□□□ -0.59
CDH6-205ENST00000514738 IGKV3-15P01624 115 aa11.39□□□□□ -0.59
CDH6-205ENST00000514738 M0R2N4 97 aa11.39□□□□□ -0.59
CDH6-205ENST00000514738 SERTAD4-AS1Q5TG53 156 aa11.39□□□□□ -0.59
CDH6-205ENST00000514738 HTTP42858 3142 aa11.39□□□□□ -0.59
CDH6-205ENST00000514738 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.38□□□□□ -0.59
CDH6-205ENST00000514738 AHCTF1Q8WYP5 2266 aa11.38□□□□□ -0.59
CDH6-205ENST00000514738 SCXQ7RTU7 201 aa11.38□□□□□ -0.59
CDH6-205ENST00000514738 ITLN2Q8WWU7 325 aaPredicted RBP11.38□□□□□ -0.59
CDH6-205ENST00000514738 KLK9Q9UKQ9 250 aa11.38□□□□□ -0.59
CDH6-205ENST00000514738 COX6A2Q02221 97 aa11.37□□□□□ -0.59
CDH6-205ENST00000514738 CCL17Q92583 94 aa11.37□□□□□ -0.59
CDH6-205ENST00000514738 C22orf34Q6ZV56 151 aa11.37□□□□□ -0.59
CDH6-205ENST00000514738 TRBV6-8A0A0A6YYG3 113 aa11.36□□□□□ -0.59
CDH6-205ENST00000514738 RNASE1P07998 156 aaKnown RBP11.36□□□□□ -0.59
CDH6-205ENST00000514738 IGHV1-3A0A0C4DH29 117 aa11.35□□□□□ -0.59
CDH6-205ENST00000514738 LOC110117498A0A087WWA1 95 aa11.34□□□□□ -0.59
CDH6-205ENST00000514738 Q8N814 137 aa11.34□□□□□ -0.59
CDH6-205ENST00000514738 PRUNE2Q8WUY3 3088 aa11.33□□□□□ -0.59
CDH6-205ENST00000514738 CCL4P13236 92 aa11.33□□□□□ -0.6
CDH6-205ENST00000514738 IGHV3-49A0A0A0MS15 119 aa11.33□□□□□ -0.6
CDH6-205ENST00000514738 SMIM1B2RUZ4 78 aa11.33□□□□□ -0.6
CDH6-205ENST00000514738 SPINK14Q6IE38 97 aa11.32□□□□□ -0.6
CDH6-205ENST00000514738 NANOS2P60321 138 aaKnown RBP11.3□□□□□ -0.6
CDH6-205ENST00000514738 DEFB1P60022 68 aa11.3□□□□□ -0.6
CDH6-205ENST00000514738 PRSS33Q8NF86 280 aa11.29□□□□□ -0.6
CDH6-205ENST00000514738 WNK2Q9Y3S1 2297 aa11.29□□□□□ -0.6
CDH6-205ENST00000514738 LINC01554Q52M75 96 aa11.29□□□□□ -0.6
CDH6-205ENST00000514738 LINC00313P59037 77 aa11.28□□□□□ -0.6
CDH6-205ENST00000514738 NTM-AS1Q6ZSK4 140 aa11.28□□□□□ -0.6
CDH6-205ENST00000514738 CHCHD7Q9BUK0 85 aa11.28□□□□□ -0.6
CDH6-205ENST00000514738 IGHV1-8P0DP01 117 aa11.28□□□□□ -0.6
CDH6-205ENST00000514738 CYP4F30PQ9H0H9 118 aa11.28□□□□□ -0.6
CDH6-205ENST00000514738 CCL18P55774 89 aa11.27□□□□□ -0.6
CDH6-205ENST00000514738 C9orf106Q8NAJ2 232 aa11.27□□□□□ -0.6
CDH6-205ENST00000514738 RNF5Q99942 180 aa11.27□□□□□ -0.6
CDH6-205ENST00000514738 TNRC18O15417 2968 aaPredicted RBP11.27□□□□□ -0.6
CDH6-205ENST00000514738 ZZEF1O43149 2961 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms