RNA–Protein interactions for RNA: ENST00000514439.1

CPNE4-211, Transcript of copine 4, humanhuman

TSL 1 (best)

Gene CPNE4, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-211ENST00000514439 C2CD3Q4AC94 2353 aa5.84□□□□□ -1.47
CPNE4-211ENST00000514439 GAGE12JA6NER3 117 aa5.84□□□□□ -1.47
CPNE4-211ENST00000514439 UBE2D3P61077 147 aa5.84□□□□□ -1.47
CPNE4-211ENST00000514439 UBE2D2P62837 147 aa5.84□□□□□ -1.47
CPNE4-211ENST00000514439 GAGE4Q13068 117 aa5.84□□□□□ -1.47
CPNE4-211ENST00000514439 GAGE5Q13069 117 aa5.84□□□□□ -1.47
CPNE4-211ENST00000514439 GAGE13Q4V321 117 aa5.84□□□□□ -1.47
CPNE4-211ENST00000514439 OCIAD2Q56VL3 154 aa5.84□□□□□ -1.47
CPNE4-211ENST00000514439 C10orf126Q8N4M7 172 aa5.84□□□□□ -1.47
CPNE4-211ENST00000514439 LINC00694P0DN24 101 aa5.83□□□□□ -1.48
CPNE4-211ENST00000514439 RBX1P62877 108 aa5.83□□□□□ -1.48
CPNE4-211ENST00000514439 DGAT2L7PQ6IED9 249 aa5.83□□□□□ -1.48
CPNE4-211ENST00000514439 NTM-AS1Q6ZSK4 140 aa5.83□□□□□ -1.48
CPNE4-211ENST00000514439 DAZ4Q86SG3 579 aaKnown RBP5.83□□□□□ -1.48
CPNE4-211ENST00000514439 OVOL2Q9BRP0 275 aa5.83□□□□□ -1.48
CPNE4-211ENST00000514439 DAZ3Q9NR90 486 aaKnown RBP5.83□□□□□ -1.48
CPNE4-211ENST00000514439 PGPEP1Q9NXJ5 209 aa5.83□□□□□ -1.48
CPNE4-211ENST00000514439 IGHV1-58A0A0C4DH39 117 aa5.83□□□□□ -1.48
CPNE4-211ENST00000514439 SPINK8P0C7L1 97 aa5.83□□□□□ -1.48
CPNE4-211ENST00000514439 GEMIN7Q9H840 131 aaKnown RBP5.83□□□□□ -1.48
CPNE4-211ENST00000514439 APOMO95445 188 aa5.82□□□□□ -1.48
CPNE4-211ENST00000514439 SPATA3Q8NHX4 192 aa5.82□□□□□ -1.48
CPNE4-211ENST00000514439 NSD1Q96L73 2696 aaPredicted RBP5.82□□□□□ -1.48
CPNE4-211ENST00000514439 FN1P02751 2386 aaKnown RBP5.82□□□□□ -1.48
CPNE4-211ENST00000514439 A0A0J9YXY3 114 aa5.82□□□□□ -1.48
CPNE4-211ENST00000514439 LOC100131303A0A0U1RQF7 123 aa5.82□□□□□ -1.48
CPNE4-211ENST00000514439 TSPAN13O95857 204 aa5.82□□□□□ -1.48
CPNE4-211ENST00000514439 SBSPONQ8IVN8 264 aa5.82□□□□□ -1.48
CPNE4-211ENST00000514439 VSIG2Q96IQ7 327 aa5.82□□□□□ -1.48
CPNE4-211ENST00000514439 TRGV4A0A0C4DH28 118 aa5.81□□□□□ -1.48
CPNE4-211ENST00000514439 TRBV6-4A0A1B0GX49 114 aa5.81□□□□□ -1.48
CPNE4-211ENST00000514439 A8MZ25 164 aa5.81□□□□□ -1.48
CPNE4-211ENST00000514439 TMEM238C9JI98 176 aa5.81□□□□□ -1.48
CPNE4-211ENST00000514439 CFC1BP0CG36 223 aa5.81□□□□□ -1.48
CPNE4-211ENST00000514439 CFC1P0CG37 223 aa5.81□□□□□ -1.48
CPNE4-211ENST00000514439 TIRAPP58753 221 aa5.81□□□□□ -1.48
CPNE4-211ENST00000514439 CDKN2A-AS1Q9UH64 79 aa5.81□□□□□ -1.48
CPNE4-211ENST00000514439 NDUFA12Q9UI09 145 aa5.81□□□□□ -1.48
CPNE4-211ENST00000514439 IGLV5-45A0A087WSX0 123 aa5.81□□□□□ -1.48
CPNE4-211ENST00000514439 H3BMG7 143 aa5.81□□□□□ -1.48
CPNE4-211ENST00000514439 CIDEAO60543 219 aa5.81□□□□□ -1.48
CPNE4-211ENST00000514439 CRLF1O75462 422 aa5.81□□□□□ -1.48
CPNE4-211ENST00000514439 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.81□□□□□ -1.48
CPNE4-211ENST00000514439 CSDC2Q9Y534 153 aaKnown RBP5.81□□□□□ -1.48
CPNE4-211ENST00000514439 A4D1N5 150 aa5.8□□□□□ -1.48
CPNE4-211ENST00000514439 INSL3P51460 131 aa5.8□□□□□ -1.48
CPNE4-211ENST00000514439 COX6A2Q02221 97 aa5.8□□□□□ -1.48
CPNE4-211ENST00000514439 FHL2Q14192 279 aa5.8□□□□□ -1.48
CPNE4-211ENST00000514439 RNF151Q2KHN1 245 aa5.8□□□□□ -1.48
CPNE4-211ENST00000514439 LITAFQ99732 161 aa5.8□□□□□ -1.48
CPNE4-211ENST00000514439 GTSF1LQ9H1H1 148 aa5.8□□□□□ -1.48
CPNE4-211ENST00000514439 K7ERU9 68 aa5.8□□□□□ -1.48
CPNE4-211ENST00000514439 HERVK_113P63121 156 aa5.8□□□□□ -1.48
CPNE4-211ENST00000514439 LINC00242Q5T6M2 205 aa5.8□□□□□ -1.48
CPNE4-211ENST00000514439 C9orf66Q5T8R8 295 aa5.8□□□□□ -1.48
CPNE4-211ENST00000514439 ZFAND6Q6FIF0 208 aa5.8□□□□□ -1.48
CPNE4-211ENST00000514439 MUSTN1Q8IVN3 82 aa5.8□□□□□ -1.48
CPNE4-211ENST00000514439 TMEM243Q9BU79 118 aa5.8□□□□□ -1.48
CPNE4-211ENST00000514439 TRAV13-1A0A0B4J241 112 aa5.79□□□□□ -1.48
CPNE4-211ENST00000514439 EIF4EBP3O60516 100 aaPredicted RBP5.79□□□□□ -1.48
CPNE4-211ENST00000514439 RPL24P83731 157 aaKnown RBP5.79□□□□□ -1.48
CPNE4-211ENST00000514439 SFTA2Q6UW10 78 aa5.79□□□□□ -1.48
CPNE4-211ENST00000514439 FAM19A3Q7Z5A8 133 aa5.79□□□□□ -1.48
CPNE4-211ENST00000514439 CDC42SE2Q9NRR3 84 aa5.79□□□□□ -1.48
CPNE4-211ENST00000514439 UBE2L6O14933 153 aa5.79□□□□□ -1.48
CPNE4-211ENST00000514439 DEFB130BP0DP73 79 aa5.79□□□□□ -1.48
CPNE4-211ENST00000514439 DEFB130AP0DP74 79 aa5.79□□□□□ -1.48
CPNE4-211ENST00000514439 SMAGPQ0VAQ4 97 aa5.79□□□□□ -1.48
CPNE4-211ENST00000514439 TMEM101Q96IK0 257 aa5.79□□□□□ -1.48
CPNE4-211ENST00000514439 CBY1Q9Y3M2 126 aa5.79□□□□□ -1.48
CPNE4-211ENST00000514439 X6R8D5 127 aa5.79□□□□□ -1.48
CPNE4-211ENST00000514439 VWFP04275 2813 aa5.78□□□□□ -1.48
CPNE4-211ENST00000514439 HIVEP1P15822 2718 aa5.78□□□□□ -1.48
CPNE4-211ENST00000514439 LOC107984156A0A0G2JMH3 177 aa5.78□□□□□ -1.48
CPNE4-211ENST00000514439 F8W1H4 67 aa5.78□□□□□ -1.48
CPNE4-211ENST00000514439 ADAMTSL4-AS1Q5T5F5 129 aa5.78□□□□□ -1.48
CPNE4-211ENST00000514439 ARL17AQ8IVW1 177 aa5.78□□□□□ -1.48
CPNE4-211ENST00000514439 KIR2DL5BQ8NHK3 375 aa5.78□□□□□ -1.48
CPNE4-211ENST00000514439 PRO1854Q9UHT4 67 aa5.78□□□□□ -1.48
CPNE4-211ENST00000514439 A0A0B4J2C4 111 aa5.77□□□□□ -1.49
CPNE4-211ENST00000514439 IGLV5-39A0A0G2JS06 123 aa5.77□□□□□ -1.49
CPNE4-211ENST00000514439 MTURNQ8N3F0 131 aa5.77□□□□□ -1.49
CPNE4-211ENST00000514439 LINC00612Q8N6U2 182 aa5.77□□□□□ -1.49
CPNE4-211ENST00000514439 SPANXDQ9BXN6 97 aa5.77□□□□□ -1.49
CPNE4-211ENST00000514439 SPANXCQ9NY87 97 aa5.77□□□□□ -1.49
CPNE4-211ENST00000514439 SMCPP49901 116 aaPredicted RBP5.77□□□□□ -1.49
CPNE4-211ENST00000514439 WFDC2Q14508 124 aa5.77□□□□□ -1.49
CPNE4-211ENST00000514439 CITED1Q99966 193 aa5.77□□□□□ -1.49
CPNE4-211ENST00000514439 PRO0461Q9UI25 63 aa5.77□□□□□ -1.49
CPNE4-211ENST00000514439 TRBV6-8A0A0A6YYG3 113 aa5.76□□□□□ -1.49
CPNE4-211ENST00000514439 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.76□□□□□ -1.49
CPNE4-211ENST00000514439 SMIM1B2RUZ4 78 aa5.76□□□□□ -1.49
CPNE4-211ENST00000514439 H7C423 109 aa5.76□□□□□ -1.49
CPNE4-211ENST00000514439 NDUFA1O15239 70 aa5.76□□□□□ -1.49
CPNE4-211ENST00000514439 IGHV3-33P01772 117 aa5.76□□□□□ -1.49
CPNE4-211ENST00000514439 PRSS2P07478 247 aa5.76□□□□□ -1.49
CPNE4-211ENST00000514439 GAGE6Q13070 117 aa5.76□□□□□ -1.49
CPNE4-211ENST00000514439 MIAQ16674 131 aa5.76□□□□□ -1.49
CPNE4-211ENST00000514439 LYRM7Q5U5X0 104 aa5.76□□□□□ -1.49
CPNE4-211ENST00000514439 TENM1Q9UKZ4 2725 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms