RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 DNAH14Q0VDD8 3507 aa3.27□□□□□ -1.89
HMGB3P13-201ENST00000511263 CUL9Q8IWT3 2517 aa3.26□□□□□ -1.89
HMGB3P13-201ENST00000511263 ZNF292O60281 2723 aa3.26□□□□□ -1.89
HMGB3P13-201ENST00000511263 IGKV1D-17A0A075B6S4 117 aa3.26□□□□□ -1.89
HMGB3P13-201ENST00000511263 IGKV3D-7A0A0C4DH55 119 aa3.26□□□□□ -1.89
HMGB3P13-201ENST00000511263 IGKV1-6A0A0C4DH72 117 aa3.26□□□□□ -1.89
HMGB3P13-201ENST00000511263 H0Y9J4 135 aa3.26□□□□□ -1.89
HMGB3P13-201ENST00000511263 BAALC-AS2P0C853 105 aa3.26□□□□□ -1.89
HMGB3P13-201ENST00000511263 SAA1P0DJI8 122 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P13-201ENST00000511263 PDE6HQ13956 83 aa3.26□□□□□ -1.89
HMGB3P13-201ENST00000511263 ASB16-AS1Q495Z4 193 aa3.26□□□□□ -1.89
HMGB3P13-201ENST00000511263 LYPD1Q8N2G4 141 aa3.26□□□□□ -1.89
HMGB3P13-201ENST00000511263 CSNK1G2-AS1Q8NCQ2 148 aa3.26□□□□□ -1.89
HMGB3P13-201ENST00000511263 TMEM141Q96I45 108 aa3.26□□□□□ -1.89
HMGB3P13-201ENST00000511263 UBL5Q9BZL1 73 aa3.26□□□□□ -1.89
HMGB3P13-201ENST00000511263 SDK2Q58EX2 2172 aa3.26□□□□□ -1.89
HMGB3P13-201ENST00000511263 COL27A1Q8IZC6 1860 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P13-201ENST00000511263 USP34Q70CQ2 3546 aa3.26□□□□□ -1.89
HMGB3P13-201ENST00000511263 SHANK1Q9Y566 2161 aa3.25□□□□□ -1.89
HMGB3P13-201ENST00000511263 DMDP11532 3685 aa3.25□□□□□ -1.89
HMGB3P13-201ENST00000511263 MPDZO75970 2070 aa3.25□□□□□ -1.89
HMGB3P13-201ENST00000511263 IGLV2-18A0A075B6J9 118 aa3.25□□□□□ -1.89
HMGB3P13-201ENST00000511263 E7EUB6 86 aa3.25□□□□□ -1.89
HMGB3P13-201ENST00000511263 I3L3M4 83 aa3.25□□□□□ -1.89
HMGB3P13-201ENST00000511263 IGKV3-15P01624 115 aa3.25□□□□□ -1.89
HMGB3P13-201ENST00000511263 KIAA0087Q14695 138 aa3.25□□□□□ -1.89
HMGB3P13-201ENST00000511263 C2orf83Q53S99 150 aa3.25□□□□□ -1.89
HMGB3P13-201ENST00000511263 LYZL1Q6UWQ5 148 aa3.25□□□□□ -1.89
HMGB3P13-201ENST00000511263 SOSTDC1Q6X4U4 206 aa3.25□□□□□ -1.89
HMGB3P13-201ENST00000511263 MUSTN1Q8IVN3 82 aa3.25□□□□□ -1.89
HMGB3P13-201ENST00000511263 Q8N6K4 173 aa3.25□□□□□ -1.89
HMGB3P13-201ENST00000511263 CACNA1CQ13936 2221 aa3.24□□□□□ -1.89
HMGB3P13-201ENST00000511263 TRAV23DV6A0A075B6W5 121 aa3.24□□□□□ -1.89
HMGB3P13-201ENST00000511263 A0A087WVE0 104 aa3.24□□□□□ -1.89
HMGB3P13-201ENST00000511263 IGKV1D-43A0A0B4J1Z2 117 aa3.24□□□□□ -1.89
HMGB3P13-201ENST00000511263 IGKV1-12A0A0C4DH73 117 aa3.24□□□□□ -1.89
HMGB3P13-201ENST00000511263 JMJD7-PLA2G4BH0Y9G9 81 aa3.24□□□□□ -1.89
HMGB3P13-201ENST00000511263 FSTL3O95633 263 aa3.24□□□□□ -1.89
HMGB3P13-201ENST00000511263 IGKV1D-12P01611 117 aa3.24□□□□□ -1.89
HMGB3P13-201ENST00000511263 MIAQ16674 131 aa3.24□□□□□ -1.89
HMGB3P13-201ENST00000511263 LINC00322Q6ZN03 302 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P13-201ENST00000511263 FAM19A3Q7Z5A8 133 aa3.24□□□□□ -1.89
HMGB3P13-201ENST00000511263 PRNTQ86SH4 94 aa3.24□□□□□ -1.89
HMGB3P13-201ENST00000511263 TMEM61Q8N0U2 210 aa3.24□□□□□ -1.89
HMGB3P13-201ENST00000511263 LINC00269Q8N2A0 174 aa3.24□□□□□ -1.89
HMGB3P13-201ENST00000511263 ZNF491Q8N8L2 437 aa3.24□□□□□ -1.89
HMGB3P13-201ENST00000511263 CLEC2BQ92478 149 aa3.24□□□□□ -1.89
HMGB3P13-201ENST00000511263 LIMD2Q9BT23 127 aa3.24□□□□□ -1.89
HMGB3P13-201ENST00000511263 SMIM2Q9BVW6 85 aa3.24□□□□□ -1.89
HMGB3P13-201ENST00000511263 TMEM14CQ9P0S9 112 aa3.24□□□□□ -1.89
HMGB3P13-201ENST00000511263 FAM215AQ9Y5M1 114 aa3.24□□□□□ -1.89
HMGB3P13-201ENST00000511263 CEP250Q9BV73 2442 aa3.23□□□□□ -1.89
HMGB3P13-201ENST00000511263 IGHV3-15A0A0B4J1V0 119 aa3.23□□□□□ -1.89
HMGB3P13-201ENST00000511263 IGHV3OR16-9A0A0B4J2B5 98 aa3.23□□□□□ -1.89
HMGB3P13-201ENST00000511263 IGIPA6NJ69 53 aa3.23□□□□□ -1.89
HMGB3P13-201ENST00000511263 A6NN06 94 aa3.23□□□□□ -1.89
HMGB3P13-201ENST00000511263 BUB1B-PAK6H3BSN5 160 aa3.23□□□□□ -1.89
HMGB3P13-201ENST00000511263 M0R1W7 72 aa3.23□□□□□ -1.89
HMGB3P13-201ENST00000511263 TRBV12-3P01733 135 aa3.23□□□□□ -1.89
HMGB3P13-201ENST00000511263 ZNF32P17041 273 aa3.23□□□□□ -1.89
HMGB3P13-201ENST00000511263 IGHV1-2P23083 117 aa3.23□□□□□ -1.89
HMGB3P13-201ENST00000511263 RNASE4P34096 147 aaKnown RBP3.23□□□□□ -1.89
HMGB3P13-201ENST00000511263 FXYD7P58549 80 aa3.23□□□□□ -1.89
HMGB3P13-201ENST00000511263 LINC01554Q52M75 96 aa3.23□□□□□ -1.89
HMGB3P13-201ENST00000511263 CNEP1R1Q8N9A8 125 aa3.23□□□□□ -1.89
HMGB3P13-201ENST00000511263 RMI2Q96E14 147 aa3.23□□□□□ -1.89
HMGB3P13-201ENST00000511263 OBSCN-AS1Q96MR7 158 aa3.23□□□□□ -1.89
HMGB3P13-201ENST00000511263 IGKV1-27A0A075B6S5 117 aa3.22□□□□□ -1.89
HMGB3P13-201ENST00000511263 TRBV7-4A0A0J9YYF1 115 aa3.22□□□□□ -1.89
HMGB3P13-201ENST00000511263 hDV103S1A0JD37 113 aa3.22□□□□□ -1.89
HMGB3P13-201ENST00000511263 IGHV3-9P01782 118 aa3.22□□□□□ -1.89
HMGB3P13-201ENST00000511263 RPL28P46779 137 aaKnown RBP3.22□□□□□ -1.89
HMGB3P13-201ENST00000511263 SYCNQ0VAF6 134 aa3.22□□□□□ -1.89
HMGB3P13-201ENST00000511263 LINC00612Q8N6U2 182 aa3.22□□□□□ -1.89
HMGB3P13-201ENST00000511263 TMEM254Q8TBM7 123 aa3.22□□□□□ -1.89
HMGB3P13-201ENST00000511263 RNF185Q96GF1 192 aa3.22□□□□□ -1.89
HMGB3P13-201ENST00000511263 TMEM14BQ9NUH8 114 aa3.22□□□□□ -1.89
HMGB3P13-201ENST00000511263 LINC00846Q9NV44 126 aa3.22□□□□□ -1.89
HMGB3P13-201ENST00000511263 MYO15AQ9UKN7 3530 aa3.22□□□□□ -1.89
HMGB3P13-201ENST00000511263 CNTRLQ7Z7A1 2325 aa3.21□□□□□ -1.89
HMGB3P13-201ENST00000511263 C17orf98A8MV24 154 aa3.21□□□□□ -1.9
HMGB3P13-201ENST00000511263 KLLNB2CW77 178 aa3.21□□□□□ -1.9
HMGB3P13-201ENST00000511263 H0YGX0 51 aa3.21□□□□□ -1.9
HMGB3P13-201ENST00000511263 C19orf84I3L1E1 186 aa3.21□□□□□ -1.9
HMGB3P13-201ENST00000511263 PSPHP1O15172 72 aa3.21□□□□□ -1.9
HMGB3P13-201ENST00000511263 IGHV1-69P01742 117 aa3.21□□□□□ -1.9
HMGB3P13-201ENST00000511263 PRM2P04554 102 aa3.21□□□□□ -1.9
HMGB3P13-201ENST00000511263 ERHP84090 104 aaKnown RBP3.21□□□□□ -1.9
HMGB3P13-201ENST00000511263 PRCDQ00LT1 54 aa3.21□□□□□ -1.9
HMGB3P13-201ENST00000511263 SPINK9Q5DT21 86 aa3.21□□□□□ -1.9
HMGB3P13-201ENST00000511263 C9orf66Q5T8R8 295 aa3.21□□□□□ -1.9
HMGB3P13-201ENST00000511263 C2orf66Q6UXQ4 117 aa3.21□□□□□ -1.9
HMGB3P13-201ENST00000511263 GPHB5Q86YW7 130 aa3.21□□□□□ -1.9
HMGB3P13-201ENST00000511263 KLHL30-AS1Q8NEE0 82 aa3.21□□□□□ -1.9
HMGB3P13-201ENST00000511263 AMELXQ99217 191 aa3.21□□□□□ -1.9
HMGB3P13-201ENST00000511263 BPESC1Q9GZL8 116 aa3.21□□□□□ -1.9
HMGB3P13-201ENST00000511263 PRR34Q9NV39 138 aa3.21□□□□□ -1.9
HMGB3P13-201ENST00000511263 FER1L5A0AVI2 2057 aa3.21□□□□□ -1.9
HMGB3P13-201ENST00000511263 NOTCH2Q04721 2471 aa3.2□□□□□ -1.9
HMGB3P13-201ENST00000511263 ACACAQ13085 2346 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms