RNA–Protein interactions for RNA: ENST00000510576.6

CLMAT3-201, colorectal liver metastasis associated transcript 3, humanhuman

TSL 1 (best) BASIC

Gene CLMAT3, Length 1,973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMAT3-201ENST00000510576 KRTAP10-3P60369 221 aa11.85□□□□□ -0.51
CLMAT3-201ENST00000510576 CSNK1G2-AS1Q8NCQ2 148 aa11.85□□□□□ -0.51
CLMAT3-201ENST00000510576 TRAV8-3A0A0A6YYJ7 113 aa11.84□□□□□ -0.51
CLMAT3-201ENST00000510576 GAGE7O76087 117 aa11.84□□□□□ -0.51
CLMAT3-201ENST00000510576 GAGE12FP0CL80 117 aa11.84□□□□□ -0.51
CLMAT3-201ENST00000510576 GAGE12GP0CL81 117 aa11.84□□□□□ -0.51
CLMAT3-201ENST00000510576 GAGE12IP0CL82 117 aa11.84□□□□□ -0.51
CLMAT3-201ENST00000510576 C10orf126Q8N4M7 172 aa11.84□□□□□ -0.51
CLMAT3-201ENST00000510576 TRGV2A0A075B6R0 118 aa11.83□□□□□ -0.52
CLMAT3-201ENST00000510576 A0A0J9YXY3 114 aa11.83□□□□□ -0.52
CLMAT3-201ENST00000510576 GAGE12JA6NER3 117 aa11.83□□□□□ -0.52
CLMAT3-201ENST00000510576 UBE2D3P61077 147 aa11.83□□□□□ -0.52
CLMAT3-201ENST00000510576 UBE2D2P62837 147 aa11.83□□□□□ -0.52
CLMAT3-201ENST00000510576 GAGE4Q13068 117 aa11.83□□□□□ -0.52
CLMAT3-201ENST00000510576 GAGE5Q13069 117 aa11.83□□□□□ -0.52
CLMAT3-201ENST00000510576 GAGE13Q4V321 117 aa11.83□□□□□ -0.52
CLMAT3-201ENST00000510576 HIVEP2P31629 2446 aa11.83□□□□□ -0.52
CLMAT3-201ENST00000510576 H3BMG7 143 aa11.83□□□□□ -0.52
CLMAT3-201ENST00000510576 SPINK8P0C7L1 97 aa11.83□□□□□ -0.52
CLMAT3-201ENST00000510576 CFC1BP0CG36 223 aa11.83□□□□□ -0.52
CLMAT3-201ENST00000510576 CFC1P0CG37 223 aa11.83□□□□□ -0.52
CLMAT3-201ENST00000510576 VSIG2Q96IQ7 327 aa11.83□□□□□ -0.52
CLMAT3-201ENST00000510576 OVOL2Q9BRP0 275 aa11.83□□□□□ -0.52
CLMAT3-201ENST00000510576 F8W1H4 67 aa11.82□□□□□ -0.52
CLMAT3-201ENST00000510576 CIDEAO60543 219 aa11.82□□□□□ -0.52
CLMAT3-201ENST00000510576 TIRAPP58753 221 aa11.82□□□□□ -0.52
CLMAT3-201ENST00000510576 LINC00482Q8N8I6 264 aa11.82□□□□□ -0.52
CLMAT3-201ENST00000510576 VPS25Q9BRG1 176 aa11.82□□□□□ -0.52
CLMAT3-201ENST00000510576 RPL24P83731 157 aaKnown RBP11.81□□□□□ -0.52
CLMAT3-201ENST00000510576 SMAGPQ0VAQ4 97 aa11.81□□□□□ -0.52
CLMAT3-201ENST00000510576 F8P00451 2351 aa11.81□□□□□ -0.52
CLMAT3-201ENST00000510576 LYRM7Q5U5X0 104 aa11.81□□□□□ -0.52
CLMAT3-201ENST00000510576 NTM-AS1Q6ZSK4 140 aa11.81□□□□□ -0.52
CLMAT3-201ENST00000510576 NDUFA12Q9UI09 145 aa11.81□□□□□ -0.52
CLMAT3-201ENST00000510576 A4D1N5 150 aa11.8□□□□□ -0.52
CLMAT3-201ENST00000510576 LINC00694P0DN24 101 aa11.8□□□□□ -0.52
CLMAT3-201ENST00000510576 MUSTN1Q8IVN3 82 aa11.8□□□□□ -0.52
CLMAT3-201ENST00000510576 IGLV5-45A0A087WSX0 123 aa11.79□□□□□ -0.52
CLMAT3-201ENST00000510576 LOC107984156A0A0G2JMH3 177 aa11.79□□□□□ -0.52
CLMAT3-201ENST00000510576 SBSPONQ8IVN8 264 aa11.79□□□□□ -0.52
CLMAT3-201ENST00000510576 ARL17AQ8IVW1 177 aa11.79□□□□□ -0.52
CLMAT3-201ENST00000510576 CDKN2A-AS1Q9UH64 79 aa11.79□□□□□ -0.52
CLMAT3-201ENST00000510576 PRO1854Q9UHT4 67 aa11.79□□□□□ -0.52
CLMAT3-201ENST00000510576 CSDC2Q9Y534 153 aaKnown RBP11.79□□□□□ -0.52
CLMAT3-201ENST00000510576 JMJD1CQ15652 2540 aa11.79□□□□□ -0.52
CLMAT3-201ENST00000510576 TRGV4A0A0C4DH28 118 aa11.78□□□□□ -0.52
CLMAT3-201ENST00000510576 TRBV6-4A0A1B0GX49 114 aa11.78□□□□□ -0.52
CLMAT3-201ENST00000510576 G3V4G9 280 aa11.78□□□□□ -0.52
CLMAT3-201ENST00000510576 HERVK_113P63121 156 aa11.78□□□□□ -0.52
CLMAT3-201ENST00000510576 GTSF1LQ9H1H1 148 aa11.78□□□□□ -0.52
CLMAT3-201ENST00000510576 NIPBLQ6KC79 2804 aaeCLIP11.78□□□□□ -0.52
CLMAT3-201ENST00000510576 TEP1Q99973 2627 aaKnown RBP11.78□□□□□ -0.52
CLMAT3-201ENST00000510576 WFDC2Q14508 124 aa11.78□□□□□ -0.52
CLMAT3-201ENST00000510576 ZFAND6Q6FIF0 208 aa11.78□□□□□ -0.52
CLMAT3-201ENST00000510576 SFTA2Q6UW10 78 aa11.78□□□□□ -0.52
CLMAT3-201ENST00000510576 NSD1Q96L73 2696 aaPredicted RBP11.77□□□□□ -0.52
CLMAT3-201ENST00000510576 A0A0B4J2C4 111 aa11.77□□□□□ -0.53
CLMAT3-201ENST00000510576 A8MZ25 164 aa11.77□□□□□ -0.53
CLMAT3-201ENST00000510576 UBE2L6O14933 153 aa11.77□□□□□ -0.53
CLMAT3-201ENST00000510576 LITAFQ99732 161 aa11.77□□□□□ -0.53
CLMAT3-201ENST00000510576 TMEM243Q9BU79 118 aa11.77□□□□□ -0.53
CLMAT3-201ENST00000510576 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.76□□□□□ -0.53
CLMAT3-201ENST00000510576 INAFM1C9JVW0 142 aa11.76□□□□□ -0.53
CLMAT3-201ENST00000510576 FAM19A3Q7Z5A8 133 aa11.76□□□□□ -0.53
CLMAT3-201ENST00000510576 SPANXDQ9BXN6 97 aa11.76□□□□□ -0.53
CLMAT3-201ENST00000510576 SPANXCQ9NY87 97 aa11.76□□□□□ -0.53
CLMAT3-201ENST00000510576 LOC100131303A0A0U1RQF7 123 aa11.76□□□□□ -0.53
CLMAT3-201ENST00000510576 PSMB2P49721 201 aa11.76□□□□□ -0.53
CLMAT3-201ENST00000510576 COX6A2Q02221 97 aa11.76□□□□□ -0.53
CLMAT3-201ENST00000510576 LINC00242Q5T6M2 205 aa11.76□□□□□ -0.53
CLMAT3-201ENST00000510576 PRO0461Q9UI25 63 aa11.76□□□□□ -0.53
CLMAT3-201ENST00000510576 NOTCH3Q9UM47 2321 aa11.75□□□□□ -0.53
CLMAT3-201ENST00000510576 TEX48A0A1B0GUV7 120 aa11.75□□□□□ -0.53
CLMAT3-201ENST00000510576 TMEM101Q96IK0 257 aa11.75□□□□□ -0.53
CLMAT3-201ENST00000510576 CDC42SE2Q9NRR3 84 aa11.75□□□□□ -0.53
CLMAT3-201ENST00000510576 MTURNQ8N3F0 131 aa11.74□□□□□ -0.53
CLMAT3-201ENST00000510576 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.74□□□□□ -0.53
CLMAT3-201ENST00000510576 TRAV13-1A0A0B4J241 112 aa11.74□□□□□ -0.53
CLMAT3-201ENST00000510576 INSL3P51460 131 aa11.74□□□□□ -0.53
CLMAT3-201ENST00000510576 MIAQ16674 131 aa11.74□□□□□ -0.53
CLMAT3-201ENST00000510576 NDUFA1O15239 70 aa11.73□□□□□ -0.53
CLMAT3-201ENST00000510576 EIF4EBP3O60516 100 aaPredicted RBP11.73□□□□□ -0.53
CLMAT3-201ENST00000510576 CRLF1O75462 422 aa11.73□□□□□ -0.53
CLMAT3-201ENST00000510576 IGHV3-33P01772 117 aa11.73□□□□□ -0.53
CLMAT3-201ENST00000510576 PRSS2P07478 247 aa11.73□□□□□ -0.53
CLMAT3-201ENST00000510576 FHL2Q14192 279 aa11.73□□□□□ -0.53
CLMAT3-201ENST00000510576 ERG28Q9UKR5 140 aa11.73□□□□□ -0.53
CLMAT3-201ENST00000510576 TRBV20-1A0A075B6N2 111 aa11.72□□□□□ -0.53
CLMAT3-201ENST00000510576 H7C423 109 aa11.72□□□□□ -0.53
CLMAT3-201ENST00000510576 TIMM17BO60830 172 aa11.72□□□□□ -0.53
CLMAT3-201ENST00000510576 ADAMTSL4-AS1Q5T5F5 129 aa11.72□□□□□ -0.53
CLMAT3-201ENST00000510576 C9orf66Q5T8R8 295 aa11.72□□□□□ -0.53
CLMAT3-201ENST00000510576 IGLV5-39A0A0G2JS06 123 aa11.72□□□□□ -0.53
CLMAT3-201ENST00000510576 SCGB1C2P0DMR2 95 aa11.71□□□□□ -0.53
CLMAT3-201ENST00000510576 KIR2DL5BQ8NHK3 375 aa11.71□□□□□ -0.53
CLMAT3-201ENST00000510576 FN1P02751 2386 aaKnown RBP11.71□□□□□ -0.54
CLMAT3-201ENST00000510576 ETDBQ3ZM63 59 aa11.7□□□□□ -0.54
CLMAT3-201ENST00000510576 SH2D6Q7Z4S9 175 aa11.7□□□□□ -0.54
CLMAT3-201ENST00000510576 TCL1BO95988 128 aa11.7□□□□□ -0.54
CLMAT3-201ENST00000510576 SMIM1B2RUZ4 78 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms