RNA–Protein interactions for RNA: ENST00000509982.5

CDK11A-223, Transcript of cyclin dependent kinase 11A, human

TSL 5

Gene CDK11A, Length 2,306 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK11A-223	ENST00000509982	SCGB1C2	P0DMR2	95 aa		13.33	□□□□□ -0.28
CDK11A-223	ENST00000509982	TRBV20-1	A0A075B6N2	111 aa		13.32	□□□□□ -0.28
CDK11A-223	ENST00000509982	SCGB1A1	P11684	91 aa		13.32	□□□□□ -0.28
CDK11A-223	ENST00000509982		Q6ZTI0	123 aa		13.32	□□□□□ -0.28
CDK11A-223	ENST00000509982	NOTCH3	Q9UM47	2321 aa		13.32	□□□□□ -0.28
CDK11A-223	ENST00000509982	FOXI1	Q12951	378 aa		13.31	□□□□□ -0.28
CDK11A-223	ENST00000509982	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	13.31	□□□□□ -0.28
CDK11A-223	ENST00000509982	CDKN2A-AS1	Q9UH64	79 aa		13.31	□□□□□ -0.28
CDK11A-223	ENST00000509982	GEMIN7	Q9H840	131 aa	Known RBP	13.31	□□□□□ -0.28
CDK11A-223	ENST00000509982	PDZD2	O15018	2839 aa		13.31	□□□□□ -0.28
CDK11A-223	ENST00000509982	KRTAP1-1	Q07627	177 aa		13.3	□□□□□ -0.28
CDK11A-223	ENST00000509982	TEX29	Q8N6K0	151 aa		13.3	□□□□□ -0.28
CDK11A-223	ENST00000509982	ERG28	Q9UKR5	140 aa		13.3	□□□□□ -0.28
CDK11A-223	ENST00000509982	LINC00694	P0DN24	101 aa		13.3	□□□□□ -0.28
CDK11A-223	ENST00000509982	ATP6V0E2	Q8NHE4	81 aa		13.3	□□□□□ -0.28
CDK11A-223	ENST00000509982	WFDC10A	Q9H1F0	79 aa		13.3	□□□□□ -0.28
CDK11A-223	ENST00000509982	MTOR	P42345	2549 aa		13.3	□□□□□ -0.28
CDK11A-223	ENST00000509982	PRSS2	P07478	247 aa		13.29	□□□□□ -0.28
CDK11A-223	ENST00000509982	LINC01006	Q8NI28	216 aa		13.29	□□□□□ -0.28
CDK11A-223	ENST00000509982	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	13.29	□□□□□ -0.28
CDK11A-223	ENST00000509982	GIG44	P09565	113 aa	Predicted RBP	13.29	□□□□□ -0.28
CDK11A-223	ENST00000509982	COX6A2	Q02221	97 aa		13.29	□□□□□ -0.28
CDK11A-223	ENST00000509982	ZFAND6	Q6FIF0	208 aa		13.28	□□□□□ -0.28
CDK11A-223	ENST00000509982	DGAT2L7P	Q6IED9	249 aa		13.28	□□□□□ -0.28
CDK11A-223	ENST00000509982	SBSPON	Q8IVN8	264 aa		13.28	□□□□□ -0.28
CDK11A-223	ENST00000509982	NPC2	P61916	151 aa		13.28	□□□□□ -0.28
CDK11A-223	ENST00000509982	NTM-AS1	Q6ZSK4	140 aa		13.28	□□□□□ -0.28
CDK11A-223	ENST00000509982	SPANXD	Q9BXN6	97 aa		13.28	□□□□□ -0.28
CDK11A-223	ENST00000509982	SPANXC	Q9NY87	97 aa		13.28	□□□□□ -0.28
CDK11A-223	ENST00000509982		K7EQD1	137 aa		13.27	□□□□□ -0.28
CDK11A-223	ENST00000509982	IGLV5-45	A0A087WSX0	123 aa		13.27	□□□□□ -0.29
CDK11A-223	ENST00000509982	NDUFA7	O95182	113 aa		13.27	□□□□□ -0.29
CDK11A-223	ENST00000509982	CARD19	Q96LW7	228 aa		13.27	□□□□□ -0.29
CDK11A-223	ENST00000509982	TIRAP	P58753	221 aa		13.26	□□□□□ -0.29
CDK11A-223	ENST00000509982	MIA	Q16674	131 aa		13.26	□□□□□ -0.29
CDK11A-223	ENST00000509982		Q1RN00	199 aa		13.26	□□□□□ -0.29
CDK11A-223	ENST00000509982	TMEM101	Q96IK0	257 aa		13.26	□□□□□ -0.29
CDK11A-223	ENST00000509982	NOP10	Q9NPE3	64 aa	Known RBP	13.26	□□□□□ -0.29
CDK11A-223	ENST00000509982	TEN1	Q86WV5	123 aa		13.25	□□□□□ -0.29
CDK11A-223	ENST00000509982	C2CD3	Q4AC94	2353 aa		13.25	□□□□□ -0.29
CDK11A-223	ENST00000509982	RPL36A	P83881	106 aa	Known RBP	13.25	□□□□□ -0.29
CDK11A-223	ENST00000509982	RPL36AL	Q969Q0	106 aa	Known RBP	13.25	□□□□□ -0.29
CDK11A-223	ENST00000509982	YAE1D1	Q9NRH1	226 aa		13.25	□□□□□ -0.29
CDK11A-223	ENST00000509982	TRAV4	A0A0B4J268	109 aa		13.24	□□□□□ -0.29
CDK11A-223	ENST00000509982	LINC00242	Q5T6M2	205 aa		13.24	□□□□□ -0.29
CDK11A-223	ENST00000509982	ANK3	Q12955	4377 aa	Known RBP	13.24	□□□□□ -0.29
CDK11A-223	ENST00000509982	ITPR2	Q14571	2701 aa		13.24	□□□□□ -0.29
CDK11A-223	ENST00000509982	GAGE12J	A6NER3	117 aa		13.24	□□□□□ -0.29
CDK11A-223	ENST00000509982	CIDEA	O60543	219 aa		13.24	□□□□□ -0.29
CDK11A-223	ENST00000509982	GAGE4	Q13068	117 aa		13.24	□□□□□ -0.29
CDK11A-223	ENST00000509982	GAGE5	Q13069	117 aa		13.24	□□□□□ -0.29
CDK11A-223	ENST00000509982	TRBV10-1	A0A0K0K1A3	114 aa		13.23	□□□□□ -0.29
CDK11A-223	ENST00000509982	PLAC8L1	A1L4L8	177 aa		13.23	□□□□□ -0.29
CDK11A-223	ENST00000509982	ANKRD29	Q8N6D5	301 aa		13.23	□□□□□ -0.29
CDK11A-223	ENST00000509982	DAND5	Q8N907	189 aa		13.23	□□□□□ -0.29
CDK11A-223	ENST00000509982		C9JAW5	83 aa		13.23	□□□□□ -0.29
CDK11A-223	ENST00000509982	RNASE1	P07998	156 aa	Known RBP	13.23	□□□□□ -0.29
CDK11A-223	ENST00000509982	RPL35A	P18077	110 aa	Known RBP	13.23	□□□□□ -0.29
CDK11A-223	ENST00000509982	CDIP1	Q9H305	208 aa		13.23	□□□□□ -0.29
CDK11A-223	ENST00000509982	TRIAP1	O43715	76 aa		13.22	□□□□□ -0.29
CDK11A-223	ENST00000509982	PPDPFL	Q8WWR9	84 aa		13.22	□□□□□ -0.29
CDK11A-223	ENST00000509982	C16orf95	Q9H693	158 aa		13.22	□□□□□ -0.29
CDK11A-223	ENST00000509982	C19orf73	Q9NVV2	129 aa		13.22	□□□□□ -0.29
CDK11A-223	ENST00000509982	SLC25A20	O43772	301 aa		13.22	□□□□□ -0.29
CDK11A-223	ENST00000509982	DAZ2	Q13117	558 aa	Known RBP	13.22	□□□□□ -0.29
CDK11A-223	ENST00000509982	DAZ4	Q86SG3	579 aa	Known RBP	13.22	□□□□□ -0.29
CDK11A-223	ENST00000509982	DAZ3	Q9NR90	486 aa	Known RBP	13.22	□□□□□ -0.29
CDK11A-223	ENST00000509982	NDUFA1	O15239	70 aa		13.21	□□□□□ -0.29
CDK11A-223	ENST00000509982	TRAV13-1	A0A0B4J241	112 aa		13.21	□□□□□ -0.3
CDK11A-223	ENST00000509982	IGLV1-51	P01701	117 aa		13.21	□□□□□ -0.3
CDK11A-223	ENST00000509982	HERVK_113	P63121	156 aa		13.21	□□□□□ -0.3
CDK11A-223	ENST00000509982	IGLV5-39	A0A0G2JS06	123 aa		13.2	□□□□□ -0.3
CDK11A-223	ENST00000509982	TRBV30	A0A0K0K1B3	111 aa		13.2	□□□□□ -0.3
CDK11A-223	ENST00000509982	GAGE7	O76087	117 aa		13.2	□□□□□ -0.3
CDK11A-223	ENST00000509982	GAGE12F	P0CL80	117 aa		13.2	□□□□□ -0.3
CDK11A-223	ENST00000509982	GAGE12G	P0CL81	117 aa		13.2	□□□□□ -0.3
CDK11A-223	ENST00000509982	GAGE12I	P0CL82	117 aa		13.2	□□□□□ -0.3
CDK11A-223	ENST00000509982	PLA2G2A	P14555	144 aa		13.2	□□□□□ -0.3
CDK11A-223	ENST00000509982	CSDC2	Q9Y534	153 aa	Known RBP	13.19	□□□□□ -0.3
CDK11A-223	ENST00000509982	LOC100131303	A0A0U1RQF7	123 aa		13.19	□□□□□ -0.3
CDK11A-223	ENST00000509982	TIMM17B	O60830	172 aa		13.19	□□□□□ -0.3
CDK11A-223	ENST00000509982		Q9H8V8	135 aa		13.18	□□□□□ -0.3
CDK11A-223	ENST00000509982	SMIM1	B2RUZ4	78 aa		13.18	□□□□□ -0.3
CDK11A-223	ENST00000509982	FAM19A3	Q7Z5A8	133 aa		13.18	□□□□□ -0.3
CDK11A-223	ENST00000509982	C16orf74	Q96GX8	76 aa		13.18	□□□□□ -0.3
CDK11A-223	ENST00000509982	ZNF625	Q96I27	306 aa	Predicted RBP	13.18	□□□□□ -0.3
CDK11A-223	ENST00000509982	CDC42SE2	Q9NRR3	84 aa		13.18	□□□□□ -0.3
CDK11A-223	ENST00000509982	ICOS	Q9Y6W8	199 aa		13.18	□□□□□ -0.3
CDK11A-223	ENST00000509982	TRGV2	A0A075B6R0	118 aa		13.17	□□□□□ -0.3
CDK11A-223	ENST00000509982	ATXN8	Q156A1	80 aa		13.17	□□□□□ -0.3
CDK11A-223	ENST00000509982	CSNK1G2-AS1	Q8NCQ2	148 aa		13.17	□□□□□ -0.3
CDK11A-223	ENST00000509982	LINC01620	Q4KN68	170 aa		13.17	□□□□□ -0.3
CDK11A-223	ENST00000509982	CMC4	P56277	68 aa	Predicted RBP	13.16	□□□□□ -0.3
CDK11A-223	ENST00000509982	RNF183	Q96D59	192 aa		13.15	□□□□□ -0.3
CDK11A-223	ENST00000509982	FAM110A	Q9BQ89	295 aa		13.15	□□□□□ -0.3
CDK11A-223	ENST00000509982		A0A0U1RRA0	63 aa		13.14	□□□□□ -0.31
CDK11A-223	ENST00000509982		F5H768	121 aa		13.14	□□□□□ -0.31
CDK11A-223	ENST00000509982	IFITM1	P13164	125 aa		13.14	□□□□□ -0.31
CDK11A-223	ENST00000509982		A0A1B0GV72	72 aa		13.14	□□□□□ -0.31
CDK11A-223	ENST00000509982		M0QXV9	152 aa		13.14	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 294.4 ms