RNA–Protein interactions for RNA: ENST00000507678.5

SPCS3-203, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-203ENST00000507678 J3QKU1 62 aa15.88■□□□□ 0.13
SPCS3-203ENST00000507678 EDA2RQ9HAV5 297 aa15.88■□□□□ 0.13
SPCS3-203ENST00000507678 HECTD1Q9ULT8 2610 aa15.88■□□□□ 0.13
SPCS3-203ENST00000507678 HIVEP2P31629 2446 aa15.88■□□□□ 0.13
SPCS3-203ENST00000507678 LEPROTO15243 131 aa15.88■□□□□ 0.13
SPCS3-203ENST00000507678 A8MZ25 164 aa15.87■□□□□ 0.13
SPCS3-203ENST00000507678 SLC25A29Q8N8R3 303 aa15.87■□□□□ 0.13
SPCS3-203ENST00000507678 RS1O15537 224 aa15.87■□□□□ 0.13
SPCS3-203ENST00000507678 BEAN1Q3B7T3 259 aa15.87■□□□□ 0.13
SPCS3-203ENST00000507678 ZFAND6Q6FIF0 208 aa15.87■□□□□ 0.13
SPCS3-203ENST00000507678 UBE2D4Q9Y2X8 147 aa15.87■□□□□ 0.13
SPCS3-203ENST00000507678 IGHV3-30P01768 117 aa15.86■□□□□ 0.13
SPCS3-203ENST00000507678 IGHV3-30-5P0DP03 117 aa15.86■□□□□ 0.13
SPCS3-203ENST00000507678 PPDPFLQ8WWR9 84 aa15.86■□□□□ 0.13
SPCS3-203ENST00000507678 PYGO1Q9Y3Y4 419 aa15.86■□□□□ 0.13
SPCS3-203ENST00000507678 RNASE1P07998 156 aaKnown RBP15.85■□□□□ 0.13
SPCS3-203ENST00000507678 HERV-K104P63124 156 aa15.85■□□□□ 0.13
SPCS3-203ENST00000507678 TIMM21Q9BVV7 248 aa15.85■□□□□ 0.13
SPCS3-203ENST00000507678 NOP10Q9NPE3 64 aaKnown RBP15.85■□□□□ 0.13
SPCS3-203ENST00000507678 NHLRC4P0CG21 123 aaPredicted RBP15.85■□□□□ 0.13
SPCS3-203ENST00000507678 UBE2D1P51668 147 aa15.85■□□□□ 0.13
SPCS3-203ENST00000507678 IGHV3-30-3P0DP02 117 aa15.84■□□□□ 0.13
SPCS3-203ENST00000507678 PIK3CD-AS1Q5SR53 167 aa15.84■□□□□ 0.13
SPCS3-203ENST00000507678 TEN1Q86WV5 123 aa15.84■□□□□ 0.13
SPCS3-203ENST00000507678 DGAT2L7PQ6IED9 249 aa15.83■□□□□ 0.12
SPCS3-203ENST00000507678 NDUFA11Q86Y39 141 aa15.83■□□□□ 0.12
SPCS3-203ENST00000507678 C10orf126Q8N4M7 172 aa15.83■□□□□ 0.12
SPCS3-203ENST00000507678 CFC1BP0CG36 223 aa15.82■□□□□ 0.12
SPCS3-203ENST00000507678 CFC1P0CG37 223 aa15.82■□□□□ 0.12
SPCS3-203ENST00000507678 H7C2G1 150 aa15.82■□□□□ 0.12
SPCS3-203ENST00000507678 MRPS36P82909 103 aaKnown RBP15.81■□□□□ 0.12
SPCS3-203ENST00000507678 TRBV20-1A0A075B6N2 111 aa15.81■□□□□ 0.12
SPCS3-203ENST00000507678 SMIM20Q8N5G0 67 aa15.81■□□□□ 0.12
SPCS3-203ENST00000507678 FN1P02751 2386 aaKnown RBP15.8■□□□□ 0.12
SPCS3-203ENST00000507678 A4D1N5 150 aa15.8■□□□□ 0.12
SPCS3-203ENST00000507678 GAGE12JA6NER3 117 aa15.8■□□□□ 0.12
SPCS3-203ENST00000507678 GAGE4Q13068 117 aa15.8■□□□□ 0.12
SPCS3-203ENST00000507678 DNAJC30Q96LL9 226 aa15.8■□□□□ 0.12
SPCS3-203ENST00000507678 SPANXA1Q9NS26 97 aa15.8■□□□□ 0.12
SPCS3-203ENST00000507678 GAGE7O76087 117 aa15.79■□□□□ 0.12
SPCS3-203ENST00000507678 GIG44P09565 113 aaPredicted RBP15.79■□□□□ 0.12
SPCS3-203ENST00000507678 GAGE12FP0CL80 117 aa15.79■□□□□ 0.12
SPCS3-203ENST00000507678 GAGE12GP0CL81 117 aa15.79■□□□□ 0.12
SPCS3-203ENST00000507678 GAGE12IP0CL82 117 aa15.79■□□□□ 0.12
SPCS3-203ENST00000507678 NPC2P61916 151 aa15.79■□□□□ 0.12
SPCS3-203ENST00000507678 MUSTN1Q8IVN3 82 aa15.79■□□□□ 0.12
SPCS3-203ENST00000507678 TMEM263Q8WUH6 116 aaKnown RBP15.79■□□□□ 0.12
SPCS3-203ENST00000507678 GCN1Q92616 2671 aaKnown RBP15.79■□□□□ 0.12
SPCS3-203ENST00000507678 NDUFA7O95182 113 aa15.79■□□□□ 0.12
SPCS3-203ENST00000507678 TCL1BO95988 128 aa15.79■□□□□ 0.12
SPCS3-203ENST00000507678 PRSS2P07478 247 aa15.78■□□□□ 0.12
SPCS3-203ENST00000507678 LINC00694P0DN24 101 aa15.78■□□□□ 0.12
SPCS3-203ENST00000507678 C16orf95Q9H693 158 aa15.78■□□□□ 0.12
SPCS3-203ENST00000507678 A0A0J9YXY3 114 aa15.78■□□□□ 0.12
SPCS3-203ENST00000507678 CCDC179H3BU77 68 aa15.78■□□□□ 0.12
SPCS3-203ENST00000507678 ANKRD29Q8N6D5 301 aa15.78■□□□□ 0.12
SPCS3-203ENST00000507678 TRGV2A0A075B6R0 118 aa15.77■□□□□ 0.12
SPCS3-203ENST00000507678 UBE2D3P61077 147 aa15.77■□□□□ 0.11
SPCS3-203ENST00000507678 UBE2D2P62837 147 aa15.77■□□□□ 0.11
SPCS3-203ENST00000507678 CITED1Q99966 193 aa15.77■□□□□ 0.11
SPCS3-203ENST00000507678 K7EQD1 137 aa15.76■□□□□ 0.11
SPCS3-203ENST00000507678 IGLV1-51P01701 117 aa15.76■□□□□ 0.11
SPCS3-203ENST00000507678 RPL36AP83881 106 aaKnown RBP15.76■□□□□ 0.11
SPCS3-203ENST00000507678 IL17DQ8TAD2 202 aa15.76■□□□□ 0.11
SPCS3-203ENST00000507678 RPL36ALQ969Q0 106 aaKnown RBP15.76■□□□□ 0.11
SPCS3-203ENST00000507678 CDKN2A-AS1Q9UH64 79 aa15.76■□□□□ 0.11
SPCS3-203ENST00000507678 IGHV1-58A0A0C4DH39 117 aa15.75■□□□□ 0.11
SPCS3-203ENST00000507678 HILS1P60008 231 aa15.75■□□□□ 0.11
SPCS3-203ENST00000507678 NDUFA12Q9UI09 145 aa15.75■□□□□ 0.11
SPCS3-203ENST00000507678 TINCRA0A1B0GVN0 87 aa15.75■□□□□ 0.11
SPCS3-203ENST00000507678 SCGB1C2P0DMR2 95 aa15.74■□□□□ 0.11
SPCS3-203ENST00000507678 LOC100131303A0A0U1RQF7 123 aa15.74■□□□□ 0.11
SPCS3-203ENST00000507678 FAM110AQ9BQ89 295 aa15.74■□□□□ 0.11
SPCS3-203ENST00000507678 PRO1854Q9UHT4 67 aa15.74■□□□□ 0.11
SPCS3-203ENST00000507678 NDUFV3P56181 108 aaKnown RBP15.73■□□□□ 0.11
SPCS3-203ENST00000507678 KMT2BQ9UMN6 2715 aaPredicted RBP15.73■□□□□ 0.11
SPCS3-203ENST00000507678 TRAV13-1A0A0B4J241 112 aa15.73■□□□□ 0.11
SPCS3-203ENST00000507678 TRAV4A0A0B4J268 109 aa15.73■□□□□ 0.11
SPCS3-203ENST00000507678 COX6A2Q02221 97 aa15.73■□□□□ 0.11
SPCS3-203ENST00000507678 NTM-AS1Q6ZSK4 140 aa15.73■□□□□ 0.11
SPCS3-203ENST00000507678 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.73■□□□□ 0.11
SPCS3-203ENST00000507678 VSIG2Q96IQ7 327 aa15.73■□□□□ 0.11
SPCS3-203ENST00000507678 EIF4EBP3O60516 100 aaPredicted RBP15.72■□□□□ 0.11
SPCS3-203ENST00000507678 CRLF1O75462 422 aa15.72■□□□□ 0.11
SPCS3-203ENST00000507678 GAGE2BQ13066 116 aa15.72■□□□□ 0.11
SPCS3-203ENST00000507678 GAGE2EQ4V326 116 aa15.72■□□□□ 0.11
SPCS3-203ENST00000507678 C19orf73Q9NVV2 129 aa15.72■□□□□ 0.11
SPCS3-203ENST00000507678 GAGE2DQ9UEU5 116 aa15.72■□□□□ 0.11
SPCS3-203ENST00000507678 ADAMTSL4-AS1Q5T5F5 129 aa15.71■□□□□ 0.11
SPCS3-203ENST00000507678 NBEAL2Q6ZNJ1 2754 aa15.71■□□□□ 0.11
SPCS3-203ENST00000507678 TMEM262E9PQX1 116 aa15.71■□□□□ 0.11
SPCS3-203ENST00000507678 PF4P02776 101 aa15.71■□□□□ 0.1
SPCS3-203ENST00000507678 DAND5Q8N907 189 aa15.71■□□□□ 0.1
SPCS3-203ENST00000507678 KRTAP10-3P60369 221 aa15.7■□□□□ 0.1
SPCS3-203ENST00000507678 Q1RN00 199 aa15.7■□□□□ 0.1
SPCS3-203ENST00000507678 PLAC8L1A1L4L8 177 aa15.69■□□□□ 0.1
SPCS3-203ENST00000507678 ZNF625Q96I27 306 aaPredicted RBP15.69■□□□□ 0.1
SPCS3-203ENST00000507678 SNCGO76070 127 aa15.69■□□□□ 0.1
SPCS3-203ENST00000507678 SBSPONQ8IVN8 264 aa15.69■□□□□ 0.1
SPCS3-203ENST00000507678 C16orf74Q96GX8 76 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms