RNA–Protein interactions for RNA: ENST00000505905.1

LIN54-205, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 2

Gene LIN54, Length 810 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-205ENST00000505905 ARHGAP35Q9NRY4 1499 aa0.7□□□□□ -2.3
LIN54-205ENST00000505905 SHANK2Q9UPX8 1470 aa0.7□□□□□ -2.3
LIN54-205ENST00000505905 TRBV30A0A0K0K1B3 111 aa0.7□□□□□ -2.3
LIN54-205ENST00000505905 TMEM14DPA8MWL7 114 aa0.7□□□□□ -2.3
LIN54-205ENST00000505905 FXYD1O00168 92 aa0.7□□□□□ -2.3
LIN54-205ENST00000505905 HMGN4O00479 90 aa0.7□□□□□ -2.3
LIN54-205ENST00000505905 NDUFC1O43677 76 aa0.7□□□□□ -2.3
LIN54-205ENST00000505905 GYPAP02724 150 aa0.7□□□□□ -2.3
LIN54-205ENST00000505905 FAUP35544 74 aaKnown RBP0.7□□□□□ -2.3
LIN54-205ENST00000505905 CCL18P55774 89 aa0.7□□□□□ -2.3
LIN54-205ENST00000505905 SPAG11BQ08648 103 aa0.7□□□□□ -2.3
LIN54-205ENST00000505905 SPINK9Q5DT21 86 aa0.7□□□□□ -2.3
LIN54-205ENST00000505905 C6orf52Q5T4I8 152 aa0.7□□□□□ -2.3
LIN54-205ENST00000505905 SPAG11AQ6PDA7 123 aa0.7□□□□□ -2.3
LIN54-205ENST00000505905 KRTAP19-3Q7Z4W3 81 aa0.7□□□□□ -2.3
LIN54-205ENST00000505905 TRGV9Q99603 122 aa0.7□□□□□ -2.3
LIN54-205ENST00000505905 MANBALQ9NQG1 85 aa0.7□□□□□ -2.3
LIN54-205ENST00000505905 TMEM14BQ9NUH8 114 aa0.7□□□□□ -2.3
LIN54-205ENST00000505905 CACFD1Q9UGQ2 172 aa0.7□□□□□ -2.3
LIN54-205ENST00000505905 LOC285556D6RIA3 1793 aa0.7□□□□□ -2.3
LIN54-205ENST00000505905 SIPA1L3O60292 1781 aaPredicted RBP0.7□□□□□ -2.3
LIN54-205ENST00000505905 PRDM2Q13029 1718 aa0.69□□□□□ -2.3
LIN54-205ENST00000505905 F5P12259 2224 aa0.69□□□□□ -2.3
LIN54-205ENST00000505905 MRC1P22897 1456 aa0.69□□□□□ -2.3
LIN54-205ENST00000505905 CCDC18Q5T9S5 1454 aa0.69□□□□□ -2.3
LIN54-205ENST00000505905 A0A096LNT2 108 aa0.69□□□□□ -2.3
LIN54-205ENST00000505905 LOC285095A0A1B0GVY8 99 aa0.69□□□□□ -2.3
LIN54-205ENST00000505905 IGLC7A0M8Q6 106 aa0.69□□□□□ -2.3
LIN54-205ENST00000505905 SYS1-DBNDD2H3BUS1 97 aa0.69□□□□□ -2.3
LIN54-205ENST00000505905 K7EP34 96 aa0.69□□□□□ -2.3
LIN54-205ENST00000505905 M0R135 149 aa0.69□□□□□ -2.3
LIN54-205ENST00000505905 APOC3P02656 99 aa0.69□□□□□ -2.3
LIN54-205ENST00000505905 NMBP08949 121 aa0.69□□□□□ -2.3
LIN54-205ENST00000505905 TDRG1Q3Y452 100 aa0.69□□□□□ -2.3
LIN54-205ENST00000505905 VMO1Q7Z5L0 202 aa0.69□□□□□ -2.3
LIN54-205ENST00000505905 AMELXQ99217 191 aa0.69□□□□□ -2.3
LIN54-205ENST00000505905 UQCR10Q9UDW1 63 aa0.69□□□□□ -2.3
LIN54-205ENST00000505905 V9GYH0 126 aa0.69□□□□□ -2.3
LIN54-205ENST00000505905 ABCC3O15438 1527 aa0.69□□□□□ -2.3
LIN54-205ENST00000505905 HMGXB3Q12766 1538 aa0.69□□□□□ -2.3
LIN54-205ENST00000505905 MYOM1P52179 1685 aa0.69□□□□□ -2.3
LIN54-205ENST00000505905 MYO7BQ6PIF6 2116 aa0.68□□□□□ -2.3
LIN54-205ENST00000505905 MLH3Q9UHC1 1453 aa0.68□□□□□ -2.3
LIN54-205ENST00000505905 MYO7AQ13402 2215 aa0.68□□□□□ -2.3
LIN54-205ENST00000505905 ZFHX3Q15911 3703 aa0.68□□□□□ -2.3
LIN54-205ENST00000505905 TRGV1A0A0A0MS02 117 aa0.68□□□□□ -2.3
LIN54-205ENST00000505905 A0A0G2JND7 137 aa0.68□□□□□ -2.3
LIN54-205ENST00000505905 COX6CP09669 75 aa0.68□□□□□ -2.3
LIN54-205ENST00000505905 TRAPPC2P0DI81 140 aa0.68□□□□□ -2.3
LIN54-205ENST00000505905 TRAPPC2BP0DI82 140 aa0.68□□□□□ -2.3
LIN54-205ENST00000505905 ARHGEF5Q12774 1597 aa0.68□□□□□ -2.3
LIN54-205ENST00000505905 TMEM170BQ5T4T1 132 aa0.68□□□□□ -2.3
LIN54-205ENST00000505905 SFTA2Q6UW10 78 aa0.68□□□□□ -2.3
LIN54-205ENST00000505905 PLAC4Q8WY50 150 aa0.68□□□□□ -2.3
LIN54-205ENST00000505905 LINC01558Q9Y6Z2 57 aa0.68□□□□□ -2.3
LIN54-205ENST00000505905 R4GMQ9 66 aa0.68□□□□□ -2.3
LIN54-205ENST00000505905 MAP2P11137 1827 aaKnown RBP0.68□□□□□ -2.3
LIN54-205ENST00000505905 WNK3Q9BYP7 1800 aa0.68□□□□□ -2.3
LIN54-205ENST00000505905 ZMYM4Q5VZL5 1548 aa0.68□□□□□ -2.3
LIN54-205ENST00000505905 DIP2CQ9Y2E4 1556 aa0.67□□□□□ -2.3
LIN54-205ENST00000505905 F8VRH5 84 aa0.67□□□□□ -2.3
LIN54-205ENST00000505905 ZNF137PP52743 207 aa0.67□□□□□ -2.3
LIN54-205ENST00000505905 FXYD6P3P58550 94 aa0.67□□□□□ -2.3
LIN54-205ENST00000505905 BAGE3Q86Y29 109 aa0.67□□□□□ -2.3
LIN54-205ENST00000505905 FAM223AQ8IWN6 122 aa0.67□□□□□ -2.3
LIN54-205ENST00000505905 S100A16Q96FQ6 103 aaKnown RBP0.67□□□□□ -2.3
LIN54-205ENST00000505905 NXT2Q9NPJ8 142 aaKnown RBP0.67□□□□□ -2.3
LIN54-205ENST00000505905 HIGD1BQ9P298 99 aa0.67□□□□□ -2.3
LIN54-205ENST00000505905 ARHGEF12Q9NZN5 1544 aa0.67□□□□□ -2.3
LIN54-205ENST00000505905 RGPD4Q7Z3J3 1758 aa0.67□□□□□ -2.3
LIN54-205ENST00000505905 PLIN4Q96Q06 1357 aa0.67□□□□□ -2.3
LIN54-205ENST00000505905 MON2Q7Z3U7 1717 aa0.67□□□□□ -2.3
LIN54-205ENST00000505905 ZNF236Q9UL36 1845 aa0.66□□□□□ -2.3
LIN54-205ENST00000505905 CEP162Q5TB80 1403 aa0.66□□□□□ -2.3
LIN54-205ENST00000505905 PPLO60437 1756 aa0.66□□□□□ -2.3
LIN54-205ENST00000505905 CDK13Q14004 1512 aaKnown RBP0.66□□□□□ -2.3
LIN54-205ENST00000505905 EHBP1L1Q8N3D4 1523 aa0.66□□□□□ -2.3
LIN54-205ENST00000505905 TRBV25-1A0A075B6N4 114 aa0.66□□□□□ -2.3
LIN54-205ENST00000505905 UQCRHLA0A096LP55 91 aa0.66□□□□□ -2.3
LIN54-205ENST00000505905 TRAV1-2A0A0B4J238 106 aa0.66□□□□□ -2.3
LIN54-205ENST00000505905 H3BQF6 201 aa0.66□□□□□ -2.3
LIN54-205ENST00000505905 K7EIL1 84 aa0.66□□□□□ -2.3
LIN54-205ENST00000505905 BCE1O60756 84 aa0.66□□□□□ -2.3
LIN54-205ENST00000505905 LY6G6CO95867 125 aa0.66□□□□□ -2.3
LIN54-205ENST00000505905 CYB5AP00167 134 aa0.66□□□□□ -2.3
LIN54-205ENST00000505905 SAA2P0DJI9 122 aaPredicted RBP0.66□□□□□ -2.3
LIN54-205ENST00000505905 RPL37P61927 97 aaKnown RBP0.66□□□□□ -2.3
LIN54-205ENST00000505905 PEA15Q15121 130 aa0.66□□□□□ -2.3
LIN54-205ENST00000505905 SPINK13Q1W4C9 94 aa0.66□□□□□ -2.3
LIN54-205ENST00000505905 BAGE2Q86Y30 109 aa0.66□□□□□ -2.3
LIN54-205ENST00000505905 SPRR4Q96PI1 79 aa0.66□□□□□ -2.3
LIN54-205ENST00000505905 C10orf95Q9H7T3 257 aa0.66□□□□□ -2.3
LIN54-205ENST00000505905 LINC00472Q9H8W2 130 aa0.66□□□□□ -2.3
LIN54-205ENST00000505905 RABAC1Q9UI14 185 aa0.66□□□□□ -2.3
LIN54-205ENST00000505905 ARL2-SNX15V9GYD0 113 aa0.66□□□□□ -2.3
LIN54-205ENST00000505905 NRXN1Q9ULB1 1477 aa0.66□□□□□ -2.3
LIN54-205ENST00000505905 RGPD3A6NKT7 1758 aaPredicted RBP0.65□□□□□ -2.3
LIN54-205ENST00000505905 DNAJC13O75165 2243 aa0.65□□□□□ -2.3
LIN54-205ENST00000505905 CACNA1CQ13936 2221 aa0.65□□□□□ -2.3
LIN54-205ENST00000505905 UACAQ9BZF9 1416 aa0.65□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms