RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 ZNF22P17026 224 aaPredicted RBP15.09■□□□□ 0.01
UBE2D3-216ENST00000503742 DEFB135Q30KP9 77 aa15.09■□□□□ 0.01
UBE2D3-216ENST00000503742 Q6ZUT4 128 aa15.09■□□□□ 0.01
UBE2D3-216ENST00000503742 SBSPONQ8IVN8 264 aa15.09■□□□□ 0.01
UBE2D3-216ENST00000503742 GTSF1LQ9H1H1 148 aa15.09■□□□□ 0.01
UBE2D3-216ENST00000503742 TMEM223A0PJW6 202 aa15.08■□□□□ 0
UBE2D3-216ENST00000503742 H3BUT2 72 aa15.08■□□□□ 0
UBE2D3-216ENST00000503742 RNASE13Q5GAN3 156 aaKnown RBP15.08■□□□□ 0
UBE2D3-216ENST00000503742 DEFB130BP0DP73 79 aa15.07■□□□□ 0
UBE2D3-216ENST00000503742 DEFB130AP0DP74 79 aa15.07■□□□□ 0
UBE2D3-216ENST00000503742 RNF151Q2KHN1 245 aa15.07■□□□□ 0
UBE2D3-216ENST00000503742 LINC00694P0DN24 101 aa15.07■□□□□ 0
UBE2D3-216ENST00000503742 CMYA5Q8N3K9 4069 aa15.06■□□□□ 0
UBE2D3-216ENST00000503742 A0A1W2PPM0 123 aa15.06■□□□□ 0
UBE2D3-216ENST00000503742 ZNF815PA8K554 130 aa15.06■□□□□ 0
UBE2D3-216ENST00000503742 SMIM13P0DJ93 91 aa15.06■□□□□ 0
UBE2D3-216ENST00000503742 TSPEAR-AS2P59090 65 aa15.05■□□□□ 0
UBE2D3-216ENST00000503742 TAL2Q16559 108 aa15.05■□□□□ 0
UBE2D3-216ENST00000503742 CSDC2Q9Y534 153 aaKnown RBP15.05■□□□□ 0
UBE2D3-216ENST00000503742 LYRM9A8MSI8 78 aa15.05■□□□□ -0
UBE2D3-216ENST00000503742 IGHV4-30-4P0DP06 118 aa15.05■□□□□ -0
UBE2D3-216ENST00000503742 VPS25Q9BRG1 176 aa15.05■□□□□ -0
UBE2D3-216ENST00000503742 TM2D2Q9BX73 214 aa15.05■□□□□ -0
UBE2D3-216ENST00000503742 FBN1P35555 2871 aaKnown RBP15.05■□□□□ -0
UBE2D3-216ENST00000503742 BAHCC1Q9P281 2608 aa15.04■□□□□ -0
UBE2D3-216ENST00000503742 C21orf62-AS1Q17RA5 79 aa15.04■□□□□ -0
UBE2D3-216ENST00000503742 TINCRA0A1B0GVN0 87 aa15.04■□□□□ -0
UBE2D3-216ENST00000503742 FABP2P12104 132 aa15.04■□□□□ -0
UBE2D3-216ENST00000503742 FAM222AQ5U5X8 452 aa15.04■□□□□ -0
UBE2D3-216ENST00000503742 CEND1Q8N111 149 aa15.04■□□□□ -0
UBE2D3-216ENST00000503742 C3orf56Q8N813 242 aa15.04■□□□□ -0
UBE2D3-216ENST00000503742 GCSHP23434 173 aa15.03■□□□□ -0
UBE2D3-216ENST00000503742 FXYD2P54710 66 aa15.03■□□□□ -0
UBE2D3-216ENST00000503742 DGAT2L7PQ6IED9 249 aa15.03■□□□□ -0
UBE2D3-216ENST00000503742 SHISA2Q6UWI4 295 aa15.03■□□□□ -0
UBE2D3-216ENST00000503742 PRIMA1Q86XR5 153 aa15.03■□□□□ -0
UBE2D3-216ENST00000503742 J3QQQ9 107 aa15.02■□□□□ -0
UBE2D3-216ENST00000503742 LEPROTO15243 131 aa15.02■□□□□ -0
UBE2D3-216ENST00000503742 UBE2D1P51668 147 aa15.02■□□□□ -0
UBE2D3-216ENST00000503742 OXLD1Q5BKU9 147 aa15.02■□□□□ -0
UBE2D3-216ENST00000503742 NBEAL2Q6ZNJ1 2754 aa15.02□□□□□ -0.01
UBE2D3-216ENST00000503742 IGHV4-28A0A0C4DH34 117 aa15.02□□□□□ -0.01
UBE2D3-216ENST00000503742 PLEKHB2Q96CS7 222 aa15.02□□□□□ -0.01
UBE2D3-216ENST00000503742 SPCS1Q9Y6A9 102 aa15.02□□□□□ -0.01
UBE2D3-216ENST00000503742 TMEM243Q9BU79 118 aa15.01□□□□□ -0.01
UBE2D3-216ENST00000503742 Q8NAQ8 132 aa15□□□□□ -0.01
UBE2D3-216ENST00000503742 RNF183Q96D59 192 aa15□□□□□ -0.01
UBE2D3-216ENST00000503742 MIFP14174 115 aa15□□□□□ -0.01
UBE2D3-216ENST00000503742 SMAGPQ0VAQ4 97 aa15□□□□□ -0.01
UBE2D3-216ENST00000503742 SAMD5Q5TGI4 173 aa15□□□□□ -0.01
UBE2D3-216ENST00000503742 RAB37Q96AX2 223 aa15□□□□□ -0.01
UBE2D3-216ENST00000503742 H7C423 109 aa14.99□□□□□ -0.01
UBE2D3-216ENST00000503742 KRTAP10-11P60412 298 aa14.99□□□□□ -0.01
UBE2D3-216ENST00000503742 HIST1H4GQ99525 98 aa14.99□□□□□ -0.01
UBE2D3-216ENST00000503742 EGFEM1PQ0D2K5 195 aa14.98□□□□□ -0.01
UBE2D3-216ENST00000503742 DEFB4AO15263 64 aa14.98□□□□□ -0.01
UBE2D3-216ENST00000503742 LGALS3P17931 250 aaKnown RBP14.98□□□□□ -0.01
UBE2D3-216ENST00000503742 TIRAPP58753 221 aa14.98□□□□□ -0.01
UBE2D3-216ENST00000503742 SCGB1D4Q6XE38 83 aa14.98□□□□□ -0.01
UBE2D3-216ENST00000503742 FAM19A3Q7Z5A8 133 aa14.98□□□□□ -0.01
UBE2D3-216ENST00000503742 CDC42SE2Q9NRR3 84 aa14.98□□□□□ -0.01
UBE2D3-216ENST00000503742 A0A0J9YY99 117 aa14.97□□□□□ -0.01
UBE2D3-216ENST00000503742 PRO0255Q9UI72 69 aa14.97□□□□□ -0.01
UBE2D3-216ENST00000503742 IGLV5-45A0A087WSX0 123 aa14.96□□□□□ -0.01
UBE2D3-216ENST00000503742 IGHV3-64A0A075B6Q5 118 aa14.96□□□□□ -0.01
UBE2D3-216ENST00000503742 TRBV6-8A0A0A6YYG3 113 aa14.96□□□□□ -0.01
UBE2D3-216ENST00000503742 UBE2L6O14933 153 aa14.96□□□□□ -0.01
UBE2D3-216ENST00000503742 IGHV3-30-3P0DP02 117 aa14.95□□□□□ -0.02
UBE2D3-216ENST00000503742 GYPEP15421 78 aa14.95□□□□□ -0.02
UBE2D3-216ENST00000503742 GEMIN7Q9H840 131 aaKnown RBP14.95□□□□□ -0.02
UBE2D3-216ENST00000503742 IGHV1-58A0A0C4DH39 117 aa14.94□□□□□ -0.02
UBE2D3-216ENST00000503742 NAA38Q9BRA0 125 aaKnown RBP14.94□□□□□ -0.02
UBE2D3-216ENST00000503742 TRAV8-3A0A0A6YYJ7 113 aa14.93□□□□□ -0.02
UBE2D3-216ENST00000503742 A8MZ25 164 aa14.93□□□□□ -0.02
UBE2D3-216ENST00000503742 G3V4G9 280 aa14.93□□□□□ -0.02
UBE2D3-216ENST00000503742 LINC00242Q5T6M2 205 aa14.93□□□□□ -0.02
UBE2D3-216ENST00000503742 CELA1Q9UNI1 258 aa14.93□□□□□ -0.02
UBE2D3-216ENST00000503742 COX6A2Q02221 97 aa14.93□□□□□ -0.02
UBE2D3-216ENST00000503742 VSIG2Q96IQ7 327 aa14.93□□□□□ -0.02
UBE2D3-216ENST00000503742 SPANXB1Q9NS25 103 aaPredicted RBP14.93□□□□□ -0.02
UBE2D3-216ENST00000503742 NHP2Q9NX24 153 aaKnown RBP14.93□□□□□ -0.02
UBE2D3-216ENST00000503742 CDKN2A-AS1Q9UH64 79 aa14.93□□□□□ -0.02
UBE2D3-216ENST00000503742 STAB1Q9NY15 2570 aa14.92□□□□□ -0.02
UBE2D3-216ENST00000503742 ATP6V0E2Q8NHE4 81 aa14.92□□□□□ -0.02
UBE2D3-216ENST00000503742 TMEM101Q96IK0 257 aa14.92□□□□□ -0.02
UBE2D3-216ENST00000503742 DNAH3Q8TD57 4116 aa14.92□□□□□ -0.02
UBE2D3-216ENST00000503742 DAD1P61803 113 aa14.91□□□□□ -0.02
UBE2D3-216ENST00000503742 HERVK_113P63121 156 aa14.91□□□□□ -0.02
UBE2D3-216ENST00000503742 SPINK8P0C7L1 97 aa14.91□□□□□ -0.02
UBE2D3-216ENST00000503742 GAGE6Q13070 117 aa14.9□□□□□ -0.02
UBE2D3-216ENST00000503742 PAX4O43316 350 aa14.89□□□□□ -0.03
UBE2D3-216ENST00000503742 SRSF9Q13242 221 aaKnown RBP eCLIP14.89□□□□□ -0.03
UBE2D3-216ENST00000503742 K7ERJ3 54 aa14.89□□□□□ -0.03
UBE2D3-216ENST00000503742 SPART-AS1P0CW21 52 aa14.89□□□□□ -0.03
UBE2D3-216ENST00000503742 C10orf126Q8N4M7 172 aa14.89□□□□□ -0.03
UBE2D3-216ENST00000503742 TRAV13-1A0A0B4J241 112 aa14.88□□□□□ -0.03
UBE2D3-216ENST00000503742 A0A1B0GWB2 263 aa14.88□□□□□ -0.03
UBE2D3-216ENST00000503742 CHCHD5Q9BSY4 110 aa14.88□□□□□ -0.03
UBE2D3-216ENST00000503742 C12orf74Q32Q52 190 aa14.87□□□□□ -0.03
UBE2D3-216ENST00000503742 IGLL5B9A064 214 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms