RNA–Protein interactions for RNA: ENST00000503565.5

SCLT1-206, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 5

Gene SCLT1, Length 734 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-206ENST00000503565 NCOA6Q14686 2063 aaPredicted RBP2.73□□□□□ -1.97
SCLT1-206ENST00000503565 CACNA1CQ13936 2221 aa2.73□□□□□ -1.97
SCLT1-206ENST00000503565 DNHD1Q96M86 4753 aa2.73□□□□□ -1.97
SCLT1-206ENST00000503565 ANKHD1Q8IWZ3 2542 aaKnown RBP2.72□□□□□ -1.97
SCLT1-206ENST00000503565 IGHV3OR15-7A0A075B7D8 119 aa2.72□□□□□ -1.97
SCLT1-206ENST00000503565 TRAV1-1A0A0B4J248 108 aa2.72□□□□□ -1.97
SCLT1-206ENST00000503565 TRAV41A0A0B4J266 112 aa2.72□□□□□ -1.97
SCLT1-206ENST00000503565 IRGMA1A4Y4 181 aa2.72□□□□□ -1.97
SCLT1-206ENST00000503565 A6NED7 52 aa2.72□□□□□ -1.97
SCLT1-206ENST00000503565 H3BMM0 161 aa2.72□□□□□ -1.97
SCLT1-206ENST00000503565 C19orf84I3L1E1 186 aa2.72□□□□□ -1.97
SCLT1-206ENST00000503565 SYNGR2O43760 224 aa2.72□□□□□ -1.97
SCLT1-206ENST00000503565 SSSCA1O60232 199 aa2.72□□□□□ -1.97
SCLT1-206ENST00000503565 NDUFB2O95178 105 aa2.72□□□□□ -1.97
SCLT1-206ENST00000503565 IGKCP01834 107 aa2.72□□□□□ -1.97
SCLT1-206ENST00000503565 ASAH2BP0C7U1 165 aa2.72□□□□□ -1.97
SCLT1-206ENST00000503565 COX8AP10176 69 aa2.72□□□□□ -1.97
SCLT1-206ENST00000503565 CSN1S1P47710 185 aa2.72□□□□□ -1.97
SCLT1-206ENST00000503565 UBE2G1P62253 170 aa2.72□□□□□ -1.97
SCLT1-206ENST00000503565 RPL18Q07020 188 aaKnown RBP2.72□□□□□ -1.97
SCLT1-206ENST00000503565 CDK5R1Q15078 307 aa2.72□□□□□ -1.97
SCLT1-206ENST00000503565 LCE3AQ5TA76 89 aa2.72□□□□□ -1.97
SCLT1-206ENST00000503565 LINC01545Q5VT33 79 aa2.72□□□□□ -1.97
SCLT1-206ENST00000503565 Q6ZQT7 251 aa2.72□□□□□ -1.97
SCLT1-206ENST00000503565 C2orf91Q6ZV80 131 aa2.72□□□□□ -1.97
SCLT1-206ENST00000503565 RPP25LQ8N5L8 163 aaKnown RBP2.72□□□□□ -1.97
SCLT1-206ENST00000503565 C15orf53Q8NAA6 179 aa2.72□□□□□ -1.97
SCLT1-206ENST00000503565 UBE2WQ96B02 151 aa2.72□□□□□ -1.97
SCLT1-206ENST00000503565 FAM103A1Q9BTL3 118 aaKnown RBP2.72□□□□□ -1.97
SCLT1-206ENST00000503565 CKLFQ9UBR5 152 aa2.72□□□□□ -1.97
SCLT1-206ENST00000503565 PHLDA3Q9Y5J5 127 aa2.72□□□□□ -1.97
SCLT1-206ENST00000503565 PDZD2O15018 2839 aa2.72□□□□□ -1.97
SCLT1-206ENST00000503565 AKAP9Q99996 3911 aa2.72□□□□□ -1.97
SCLT1-206ENST00000503565 CSMD2Q7Z408 3487 aa2.72□□□□□ -1.97
SCLT1-206ENST00000503565 FREM1Q5H8C1 2179 aa2.71□□□□□ -1.97
SCLT1-206ENST00000503565 TRAV8-1A0A0A6YYK1 113 aa2.71□□□□□ -1.98
SCLT1-206ENST00000503565 TRAV2A0A0B4J234 112 aa2.71□□□□□ -1.98
SCLT1-206ENST00000503565 MDFIC2A0A1B0GVS7 189 aa2.71□□□□□ -1.98
SCLT1-206ENST00000503565 hADV29S1A0JD25 119 aa2.71□□□□□ -1.98
SCLT1-206ENST00000503565 H3BQ85 93 aa2.71□□□□□ -1.98
SCLT1-206ENST00000503565 CST7O76096 145 aa2.71□□□□□ -1.98
SCLT1-206ENST00000503565 DAPP51397 102 aa2.71□□□□□ -1.98
SCLT1-206ENST00000503565 SNRPD3P62318 126 aaKnown RBP2.71□□□□□ -1.98
SCLT1-206ENST00000503565 TFF3Q07654 80 aa2.71□□□□□ -1.98
SCLT1-206ENST00000503565 CFAP126Q5VTH2 177 aa2.71□□□□□ -1.98
SCLT1-206ENST00000503565 SPINT4Q6UDR6 99 aa2.71□□□□□ -1.98
SCLT1-206ENST00000503565 Q6ZS49 121 aa2.71□□□□□ -1.98
SCLT1-206ENST00000503565 MYOZ3Q8TDC0 251 aa2.71□□□□□ -1.98
SCLT1-206ENST00000503565 OR8B2Q96RD0 313 aa2.71□□□□□ -1.98
SCLT1-206ENST00000503565 DPH3P1Q9H4G8 78 aa2.71□□□□□ -1.98
SCLT1-206ENST00000503565 LINC00588Q9Y4M8 146 aa2.71□□□□□ -1.98
SCLT1-206ENST00000503565 U3KQK5 164 aa2.71□□□□□ -1.98
SCLT1-206ENST00000503565 ARL2-SNX15V9GYD0 113 aa2.71□□□□□ -1.98
SCLT1-206ENST00000503565 NF1P21359 2839 aa2.71□□□□□ -1.98
SCLT1-206ENST00000503565 FBN3Q75N90 2809 aa2.7□□□□□ -1.98
SCLT1-206ENST00000503565 ALPK2Q86TB3 2170 aa2.7□□□□□ -1.98
SCLT1-206ENST00000503565 IGLV2-18A0A075B6J9 118 aa2.7□□□□□ -1.98
SCLT1-206ENST00000503565 TRAV9-1A0A075B6T8 112 aa2.7□□□□□ -1.98
SCLT1-206ENST00000503565 A0A0B4J2C4 111 aa2.7□□□□□ -1.98
SCLT1-206ENST00000503565 ZNF736B4DX44 427 aaPredicted RBP2.7□□□□□ -1.98
SCLT1-206ENST00000503565 ATOX1O00244 68 aa2.7□□□□□ -1.98
SCLT1-206ENST00000503565 UBE2L6O14933 153 aa2.7□□□□□ -1.98
SCLT1-206ENST00000503565 NDUFB3O43676 98 aa2.7□□□□□ -1.98
SCLT1-206ENST00000503565 ZNF73O43830 326 aaPredicted RBP2.7□□□□□ -1.98
SCLT1-206ENST00000503565 LGALS3P17931 250 aaKnown RBP2.7□□□□□ -1.98
SCLT1-206ENST00000503565 COL8A2P25067 703 aa2.7□□□□□ -1.98
SCLT1-206ENST00000503565 CAV3P56539 151 aa2.7□□□□□ -1.98
SCLT1-206ENST00000503565 MRPS36P82909 103 aaKnown RBP2.7□□□□□ -1.98
SCLT1-206ENST00000503565 BSPH1Q075Z2 132 aa2.7□□□□□ -1.98
SCLT1-206ENST00000503565 LY6EQ16553 131 aa2.7□□□□□ -1.98
SCLT1-206ENST00000503565 RPL7L1Q6DKI1 246 aaKnown RBP2.7□□□□□ -1.98
SCLT1-206ENST00000503565 LGALS9CQ6DKI2 356 aa2.7□□□□□ -1.98
SCLT1-206ENST00000503565 SBSPONQ8IVN8 264 aa2.7□□□□□ -1.98
SCLT1-206ENST00000503565 OR5AS1Q8N127 324 aa2.7□□□□□ -1.98
SCLT1-206ENST00000503565 Q96M85 177 aa2.7□□□□□ -1.98
SCLT1-206ENST00000503565 NMES1Q9C002 83 aa2.7□□□□□ -1.98
SCLT1-206ENST00000503565 ABRACLQ9P1F3 81 aa2.7□□□□□ -1.98
SCLT1-206ENST00000503565 HILPDAQ9Y5L2 63 aa2.7□□□□□ -1.98
SCLT1-206ENST00000503565 ABCA4P78363 2273 aa2.7□□□□□ -1.98
SCLT1-206ENST00000503565 M0R378 163 aa2.69□□□□□ -1.98
SCLT1-206ENST00000503565 M0R381 172 aa2.69□□□□□ -1.98
SCLT1-206ENST00000503565 LST1O00453 97 aa2.69□□□□□ -1.98
SCLT1-206ENST00000503565 LECT2O14960 151 aa2.69□□□□□ -1.98
SCLT1-206ENST00000503565 PRH1P02810 166 aa2.69□□□□□ -1.98
SCLT1-206ENST00000503565 FXYD6P3P58550 94 aa2.69□□□□□ -1.98
SCLT1-206ENST00000503565 PCBD1P61457 104 aa2.69□□□□□ -1.98
SCLT1-206ENST00000503565 UBE2L3P68036 154 aaKnown RBP2.69□□□□□ -1.98
SCLT1-206ENST00000503565 KRTAP13-2Q52LG2 175 aa2.69□□□□□ -1.98
SCLT1-206ENST00000503565 C10orf128Q5T292 105 aa2.69□□□□□ -1.98
SCLT1-206ENST00000503565 FAM27BQ5VT28 67 aa2.69□□□□□ -1.98
SCLT1-206ENST00000503565 CYP2G1PQ6ZSU1 146 aa2.69□□□□□ -1.98
SCLT1-206ENST00000503565 LCA10Q71F78 164 aa2.69□□□□□ -1.98
SCLT1-206ENST00000503565 FP248Q71RG6 208 aaPredicted RBP2.69□□□□□ -1.98
SCLT1-206ENST00000503565 OR5C1Q8NGR4 320 aa2.69□□□□□ -1.98
SCLT1-206ENST00000503565 RMI2Q96E14 147 aa2.69□□□□□ -1.98
SCLT1-206ENST00000503565 ABHD14BQ96IU4 210 aa2.69□□□□□ -1.98
SCLT1-206ENST00000503565 ODF3Q96PU9 254 aa2.69□□□□□ -1.98
SCLT1-206ENST00000503565 MGST2Q99735 147 aa2.69□□□□□ -1.98
SCLT1-206ENST00000503565 NIPBLQ6KC79 2804 aaeCLIP2.69□□□□□ -1.98
SCLT1-206ENST00000503565 HEATR1Q9H583 2144 aaKnown RBP2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms