RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 TMEM243Q9BU79 118 aa15.46■□□□□ 0.07
PTPN13-205ENST00000502971 CHAC1Q9BUX1 264 aa15.46■□□□□ 0.07
PTPN13-205ENST00000502971 TRBV25-1A0A075B6N4 114 aa15.46■□□□□ 0.06
PTPN13-205ENST00000502971 TEX48A0A1B0GUV7 120 aa15.46■□□□□ 0.06
PTPN13-205ENST00000502971 HINT1P49773 126 aaPredicted RBP15.46■□□□□ 0.06
PTPN13-205ENST00000502971 TMEM170BQ5T4T1 132 aa15.46■□□□□ 0.06
PTPN13-205ENST00000502971 KPRPQ5T749 579 aaPredicted RBP15.46■□□□□ 0.06
PTPN13-205ENST00000502971 Q6ZUT4 128 aa15.46■□□□□ 0.06
PTPN13-205ENST00000502971 MGAM2Q2M2H8 2515 aa15.45■□□□□ 0.06
PTPN13-205ENST00000502971 GYPEP15421 78 aa15.45■□□□□ 0.06
PTPN13-205ENST00000502971 CELA1Q9UNI1 258 aa15.45■□□□□ 0.06
PTPN13-205ENST00000502971 TRAV8-6A0A0B4J262 113 aa15.44■□□□□ 0.06
PTPN13-205ENST00000502971 A0A0J9YXV3 536 aa15.43■□□□□ 0.06
PTPN13-205ENST00000502971 UBE2L6O14933 153 aa15.43■□□□□ 0.06
PTPN13-205ENST00000502971 ATP5G1P05496 136 aa15.43■□□□□ 0.06
PTPN13-205ENST00000502971 TTTY13Q9BZ97 58 aa15.43■□□□□ 0.06
PTPN13-205ENST00000502971 HIGD1BQ9P298 99 aa15.43■□□□□ 0.06
PTPN13-205ENST00000502971 PAX4O43316 350 aa15.43■□□□□ 0.06
PTPN13-205ENST00000502971 MPV17L2Q567V2 206 aa15.43■□□□□ 0.06
PTPN13-205ENST00000502971 TRBV6-8A0A0A6YYG3 113 aa15.42■□□□□ 0.06
PTPN13-205ENST00000502971 RNASE13Q5GAN3 156 aaKnown RBP15.42■□□□□ 0.06
PTPN13-205ENST00000502971 COL5A1-AS1Q5SY13 56 aa15.42■□□□□ 0.06
PTPN13-205ENST00000502971 MAPKAPK5-AS1Q8N8E1 139 aa15.42■□□□□ 0.06
PTPN13-205ENST00000502971 ATP6V0E2Q8NHE4 81 aa15.42■□□□□ 0.06
PTPN13-205ENST00000502971 ZNF22P17026 224 aaPredicted RBP15.41■□□□□ 0.06
PTPN13-205ENST00000502971 TINCRA0A1B0GVN0 87 aa15.4■□□□□ 0.06
PTPN13-205ENST00000502971 MYMXA0A1B0GTQ4 84 aa15.4■□□□□ 0.06
PTPN13-205ENST00000502971 TMEM223A0PJW6 202 aa15.4■□□□□ 0.06
PTPN13-205ENST00000502971 BVES-AS1Q5T3Y7 98 aa15.4■□□□□ 0.06
PTPN13-205ENST00000502971 AMMECR1LQ6DCA0 310 aa15.4■□□□□ 0.06
PTPN13-205ENST00000502971 OR5A1Q8NGJ0 315 aa15.4■□□□□ 0.06
PTPN13-205ENST00000502971 TMEM101Q96IK0 257 aa15.4■□□□□ 0.06
PTPN13-205ENST00000502971 UBE2D1P51668 147 aa15.39■□□□□ 0.05
PTPN13-205ENST00000502971 HSD52Q0P140 79 aa15.39■□□□□ 0.05
PTPN13-205ENST00000502971 NBEAL1Q6ZS30 2694 aa15.38■□□□□ 0.05
PTPN13-205ENST00000502971 ZNF25P17030 456 aaPredicted RBP15.38■□□□□ 0.05
PTPN13-205ENST00000502971 CDC42SE2Q9NRR3 84 aa15.38■□□□□ 0.05
PTPN13-205ENST00000502971 NOTCH1P46531 2555 aa15.37■□□□□ 0.05
PTPN13-205ENST00000502971 VSIG2Q96IQ7 327 aa15.37■□□□□ 0.05
PTPN13-205ENST00000502971 RETNQ9HD89 108 aa15.37■□□□□ 0.05
PTPN13-205ENST00000502971 TIRAPP58753 221 aa15.36■□□□□ 0.05
PTPN13-205ENST00000502971 F5H768 121 aa15.35■□□□□ 0.05
PTPN13-205ENST00000502971 LEPROTO15243 131 aa15.35■□□□□ 0.05
PTPN13-205ENST00000502971 FAM19A3Q7Z5A8 133 aa15.35■□□□□ 0.05
PTPN13-205ENST00000502971 C11orf68Q9H3H3 251 aaKnown RBP15.35■□□□□ 0.05
PTPN13-205ENST00000502971 DNAH3Q8TD57 4116 aa15.35■□□□□ 0.05
PTPN13-205ENST00000502971 A0A1B0GV90 55 aa15.34■□□□□ 0.05
PTPN13-205ENST00000502971 CHCHD5Q9BSY4 110 aa15.34■□□□□ 0.05
PTPN13-205ENST00000502971 GEMIN7Q9H840 131 aaKnown RBP15.34■□□□□ 0.05
PTPN13-205ENST00000502971 A0A0J9YY99 117 aa15.34■□□□□ 0.05
PTPN13-205ENST00000502971 ZNF815PA8K554 130 aa15.34■□□□□ 0.05
PTPN13-205ENST00000502971 SEC11AP67812 179 aa15.34■□□□□ 0.05
PTPN13-205ENST00000502971 GAGE6Q13070 117 aa15.34■□□□□ 0.05
PTPN13-205ENST00000502971 NBEAL2Q6ZNJ1 2754 aa15.33■□□□□ 0.05
PTPN13-205ENST00000502971 TRAV26-1A0A087WT03 109 aa15.33■□□□□ 0.04
PTPN13-205ENST00000502971 J3QQQ9 107 aa15.32■□□□□ 0.04
PTPN13-205ENST00000502971 C12orf74Q32Q52 190 aa15.32■□□□□ 0.04
PTPN13-205ENST00000502971 PLEKHB2Q96CS7 222 aa15.32■□□□□ 0.04
PTPN13-205ENST00000502971 IGLV5-45A0A087WSX0 123 aa15.31■□□□□ 0.04
PTPN13-205ENST00000502971 HERVK_113P63121 156 aa15.31■□□□□ 0.04
PTPN13-205ENST00000502971 LGALS3P17931 250 aaKnown RBP15.31■□□□□ 0.04
PTPN13-205ENST00000502971 TAL2Q16559 108 aa15.31■□□□□ 0.04
PTPN13-205ENST00000502971 HTN3P15516 51 aa15.3■□□□□ 0.04
PTPN13-205ENST00000502971 TSPEAR-AS2P59090 65 aa15.3■□□□□ 0.04
PTPN13-205ENST00000502971 SH2D6Q7Z4S9 175 aa15.3■□□□□ 0.04
PTPN13-205ENST00000502971 LINC00469Q8N7U9 141 aa15.3■□□□□ 0.04
PTPN13-205ENST00000502971 ORAOV1Q8WV07 137 aa15.3■□□□□ 0.04
PTPN13-205ENST00000502971 H3BRM9 83 aa15.29■□□□□ 0.04
PTPN13-205ENST00000502971 MRPL23Q16540 153 aaKnown RBP15.29■□□□□ 0.04
PTPN13-205ENST00000502971 LINC00242Q5T6M2 205 aa15.29■□□□□ 0.04
PTPN13-205ENST00000502971 IGHV1-58A0A0C4DH39 117 aa15.29■□□□□ 0.04
PTPN13-205ENST00000502971 A0A096LPF7 62 aa15.28■□□□□ 0.04
PTPN13-205ENST00000502971 ICOSQ9Y6W8 199 aa15.28■□□□□ 0.04
PTPN13-205ENST00000502971 TRAV13-1A0A0B4J241 112 aa15.27■□□□□ 0.04
PTPN13-205ENST00000502971 SCGB1D4Q6XE38 83 aa15.27■□□□□ 0.04
PTPN13-205ENST00000502971 IGHV3-64A0A075B6Q5 118 aa15.26■□□□□ 0.03
PTPN13-205ENST00000502971 A0A1B0GUV1 79 aa15.26■□□□□ 0.03
PTPN13-205ENST00000502971 K7EIL1 84 aa15.26■□□□□ 0.03
PTPN13-205ENST00000502971 IGHV3-30-3P0DP02 117 aa15.26■□□□□ 0.03
PTPN13-205ENST00000502971 CDKN2A-AS1Q9UH64 79 aa15.26■□□□□ 0.03
PTPN13-205ENST00000502971 IGLV4-60A0A075B6I1 120 aa15.26■□□□□ 0.03
PTPN13-205ENST00000502971 COX6A2Q02221 97 aa15.26■□□□□ 0.03
PTPN13-205ENST00000502971 A6NDN8 102 aa15.25■□□□□ 0.03
PTPN13-205ENST00000502971 CEND1Q8N111 149 aa15.25■□□□□ 0.03
PTPN13-205ENST00000502971 SPATA25Q9BR10 227 aa15.25■□□□□ 0.03
PTPN13-205ENST00000502971 PRB2P02812 416 aaPredicted RBP15.24■□□□□ 0.03
PTPN13-205ENST00000502971 GCSHP23434 173 aa15.24■□□□□ 0.03
PTPN13-205ENST00000502971 HIST1H4GQ99525 98 aa15.24■□□□□ 0.03
PTPN13-205ENST00000502971 TM2D2Q9BX73 214 aa15.24■□□□□ 0.03
PTPN13-205ENST00000502971 TRAV8-3A0A0A6YYJ7 113 aa15.23■□□□□ 0.03
PTPN13-205ENST00000502971 A0A0J9YWU9 116 aa15.23■□□□□ 0.03
PTPN13-205ENST00000502971 TMEM262E9PQX1 116 aa15.23■□□□□ 0.03
PTPN13-205ENST00000502971 H3BNG1 76 aa15.23■□□□□ 0.03
PTPN13-205ENST00000502971 SPINK8P0C7L1 97 aa15.23■□□□□ 0.03
PTPN13-205ENST00000502971 RBX1P62877 108 aa15.21■□□□□ 0.03
PTPN13-205ENST00000502971 DEFB121Q5J5C9 76 aa15.21■□□□□ 0.03
PTPN13-205ENST00000502971 TM2D3Q9BRN9 247 aa15.21■□□□□ 0.03
PTPN13-205ENST00000502971 Q6ZTC4 211 aa15.2■□□□□ 0.02
PTPN13-205ENST00000502971 SPANXB1Q9NS25 103 aaPredicted RBP15.2■□□□□ 0.02
PTPN13-205ENST00000502971 TAX1BP3O14907 124 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms