RNA–Protein interactions for RNA: ENST00000497869.5

TNFRSF4-203, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 2

Gene TNFRSF4, Length 1,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-203ENST00000497869 CCL18P55774 89 aa16.5■□□□□ 0.23
TNFRSF4-203ENST00000497869 KRTDAPP60985 99 aa16.5■□□□□ 0.23
TNFRSF4-203ENST00000497869 TRAV8-6A0A0B4J262 113 aa16.49■□□□□ 0.23
TNFRSF4-203ENST00000497869 AMMECR1LQ6DCA0 310 aa16.49■□□□□ 0.23
TNFRSF4-203ENST00000497869 LINC01549A6NIU2 74 aa16.48■□□□□ 0.23
TNFRSF4-203ENST00000497869 H0Y8G0 127 aa16.48■□□□□ 0.23
TNFRSF4-203ENST00000497869 A0A1B0GUV1 79 aa16.48■□□□□ 0.23
TNFRSF4-203ENST00000497869 SYS1-DBNDD2H3BUS1 97 aa16.48■□□□□ 0.23
TNFRSF4-203ENST00000497869 MRPS36P82909 103 aaKnown RBP16.48■□□□□ 0.23
TNFRSF4-203ENST00000497869 OR5A1Q8NGJ0 315 aa16.48■□□□□ 0.23
TNFRSF4-203ENST00000497869 AMELXQ99217 191 aa16.48■□□□□ 0.23
TNFRSF4-203ENST00000497869 TCTAP57738 103 aa16.47■□□□□ 0.23
TNFRSF4-203ENST00000497869 CASC10Q5T4H9 136 aa16.47■□□□□ 0.23
TNFRSF4-203ENST00000497869 IGHV3-30P01768 117 aa16.46■□□□□ 0.23
TNFRSF4-203ENST00000497869 IGHV3-33P01772 117 aa16.46■□□□□ 0.23
TNFRSF4-203ENST00000497869 IGHV3-30-3P0DP02 117 aa16.46■□□□□ 0.23
TNFRSF4-203ENST00000497869 IGHV3-30-5P0DP03 117 aa16.46■□□□□ 0.23
TNFRSF4-203ENST00000497869 ZNF25P17030 456 aaPredicted RBP16.46■□□□□ 0.23
TNFRSF4-203ENST00000497869 DGAT2L7PQ6IED9 249 aa16.46■□□□□ 0.23
TNFRSF4-203ENST00000497869 ZNF664Q8N3J9 261 aa16.46■□□□□ 0.23
TNFRSF4-203ENST00000497869 UPK3BQ9BT76 320 aa16.46■□□□□ 0.23
TNFRSF4-203ENST00000497869 MAP1LC3CQ9BXW4 147 aa16.46■□□□□ 0.23
TNFRSF4-203ENST00000497869 PRSS29PA6NIE9 313 aa16.45■□□□□ 0.22
TNFRSF4-203ENST00000497869 PRSS1P07477 247 aa16.45■□□□□ 0.22
TNFRSF4-203ENST00000497869 Q6ZN92 141 aa16.45■□□□□ 0.22
TNFRSF4-203ENST00000497869 CST9LQ9H4G1 147 aa16.45■□□□□ 0.22
TNFRSF4-203ENST00000497869 PMCHL2Q9BQD1 86 aa16.45■□□□□ 0.22
TNFRSF4-203ENST00000497869 A0A087WX48 190 aa16.44■□□□□ 0.22
TNFRSF4-203ENST00000497869 NPSP0C0P6 89 aa16.43■□□□□ 0.22
TNFRSF4-203ENST00000497869 TMEM101Q96IK0 257 aa16.43■□□□□ 0.22
TNFRSF4-203ENST00000497869 AKR1D1P51857 326 aa16.42■□□□□ 0.22
TNFRSF4-203ENST00000497869 ODF1Q14990 250 aa16.42■□□□□ 0.22
TNFRSF4-203ENST00000497869 VCX2Q9H322 139 aa16.42■□□□□ 0.22
TNFRSF4-203ENST00000497869 DNAH10OSP0CZ25 163 aa16.42■□□□□ 0.22
TNFRSF4-203ENST00000497869 PMVKQ15126 192 aa16.42■□□□□ 0.22
TNFRSF4-203ENST00000497869 LINC01556Q5JQF7 62 aa16.42■□□□□ 0.22
TNFRSF4-203ENST00000497869 CLPSL2Q6UWE3 100 aa16.41■□□□□ 0.22
TNFRSF4-203ENST00000497869 LINC00269Q8N2A0 174 aa16.41■□□□□ 0.22
TNFRSF4-203ENST00000497869 ANGP03950 147 aaKnown RBP16.4■□□□□ 0.22
TNFRSF4-203ENST00000497869 PET117Q6UWS5 81 aa16.4■□□□□ 0.22
TNFRSF4-203ENST00000497869 TEX43Q6ZNM6 134 aa16.4■□□□□ 0.22
TNFRSF4-203ENST00000497869 TRAV12-1A0A0B4J245 112 aa16.39■□□□□ 0.21
TNFRSF4-203ENST00000497869 SIVA1O15304 175 aa16.39■□□□□ 0.21
TNFRSF4-203ENST00000497869 LINC01545Q5VT33 79 aa16.39■□□□□ 0.21
TNFRSF4-203ENST00000497869 Q9H8V8 135 aa16.39■□□□□ 0.21
TNFRSF4-203ENST00000497869 MRPL35Q9NZE8 188 aaKnown RBP16.39■□□□□ 0.21
TNFRSF4-203ENST00000497869 KLK12Q9UKR0 248 aa16.39■□□□□ 0.21
TNFRSF4-203ENST00000497869 SMAGPQ0VAQ4 97 aa16.39■□□□□ 0.21
TNFRSF4-203ENST00000497869 PYY3Q5JQD4 70 aa16.39■□□□□ 0.21
TNFRSF4-203ENST00000497869 IGLV4-69A0A075B6H9 119 aa16.38■□□□□ 0.21
TNFRSF4-203ENST00000497869 IGKV3OR2-268A0A0C4DH90 116 aa16.38■□□□□ 0.21
TNFRSF4-203ENST00000497869 C3orf84H3BNL1 204 aa16.38■□□□□ 0.21
TNFRSF4-203ENST00000497869 UBE2DNLQ8IWF7 75 aa16.38■□□□□ 0.21
TNFRSF4-203ENST00000497869 PKIAP61925 76 aa16.37■□□□□ 0.21
TNFRSF4-203ENST00000497869 ENHOQ6UWT2 76 aa16.37■□□□□ 0.21
TNFRSF4-203ENST00000497869 TRAV13-1A0A0B4J241 112 aa16.36■□□□□ 0.21
TNFRSF4-203ENST00000497869 UBE2D1P51668 147 aa16.36■□□□□ 0.21
TNFRSF4-203ENST00000497869 JOSD1Q15040 202 aaPredicted RBP16.36■□□□□ 0.21
TNFRSF4-203ENST00000497869 LGALS9CQ6DKI2 356 aa16.36■□□□□ 0.21
TNFRSF4-203ENST00000497869 PRR34Q9NV39 138 aa16.36■□□□□ 0.21
TNFRSF4-203ENST00000497869 KMT2AQ03164 3969 aa16.36■□□□□ 0.21
TNFRSF4-203ENST00000497869 A0A0J9YXV3 536 aa16.36■□□□□ 0.21
TNFRSF4-203ENST00000497869 PAPPA-AS1Q5QFB9 102 aa16.36■□□□□ 0.21
TNFRSF4-203ENST00000497869 CDPF1Q6NVV7 123 aa16.36■□□□□ 0.21
TNFRSF4-203ENST00000497869 KRTAP1-5Q9BYS1 174 aa16.36■□□□□ 0.21
TNFRSF4-203ENST00000497869 CHTOPQ9Y3Y2 248 aaKnown RBP16.36■□□□□ 0.21
TNFRSF4-203ENST00000497869 ALMS1Q8TCU4 4167 aa16.36■□□□□ 0.21
TNFRSF4-203ENST00000497869 REG3AQ06141 175 aa16.34■□□□□ 0.21
TNFRSF4-203ENST00000497869 F8VRH5 84 aa16.33■□□□□ 0.21
TNFRSF4-203ENST00000497869 LINC00959A0A1B0GUT2 108 aa16.33■□□□□ 0.2
TNFRSF4-203ENST00000497869 SCGB1D1O95968 90 aa16.33■□□□□ 0.2
TNFRSF4-203ENST00000497869 COX6A2Q02221 97 aa16.33■□□□□ 0.2
TNFRSF4-203ENST00000497869 LINC00242Q5T6M2 205 aa16.33■□□□□ 0.2
TNFRSF4-203ENST00000497869 ATOH7Q8N100 152 aa16.33■□□□□ 0.2
TNFRSF4-203ENST00000497869 C11orf86A6NJI1 115 aa16.32■□□□□ 0.2
TNFRSF4-203ENST00000497869 C2orf88Q9BSF0 95 aa16.31■□□□□ 0.2
TNFRSF4-203ENST00000497869 DNAH10Q8IVF4 4471 aa16.31■□□□□ 0.2
TNFRSF4-203ENST00000497869 UBE2WQ96B02 151 aa16.31■□□□□ 0.2
TNFRSF4-203ENST00000497869 IGLC3P0DOY3 106 aa16.3■□□□□ 0.2
TNFRSF4-203ENST00000497869 IGLV10-54A0A075B6I4 117 aa16.29■□□□□ 0.2
TNFRSF4-203ENST00000497869 FAM19A3Q7Z5A8 133 aa16.29■□□□□ 0.2
TNFRSF4-203ENST00000497869 SACSQ9NZJ4 4579 aa16.28■□□□□ 0.2
TNFRSF4-203ENST00000497869 NFE4Q86UQ8 179 aa16.28■□□□□ 0.2
TNFRSF4-203ENST00000497869 HYDINQ4G0P3 5121 aa16.28■□□□□ 0.2
TNFRSF4-203ENST00000497869 DPM2O94777 84 aa16.27■□□□□ 0.19
TNFRSF4-203ENST00000497869 MAJINQ3KP22 176 aa16.27■□□□□ 0.19
TNFRSF4-203ENST00000497869 CHAC1Q9BUX1 264 aa16.27■□□□□ 0.19
TNFRSF4-203ENST00000497869 DNAH6Q9C0G6 4158 aa16.26■□□□□ 0.19
TNFRSF4-203ENST00000497869 C20orf202A1L168 122 aa16.26■□□□□ 0.19
TNFRSF4-203ENST00000497869 IBA57-AS1B1ANH7 110 aa16.26■□□□□ 0.19
TNFRSF4-203ENST00000497869 IGKCP01834 107 aa16.26■□□□□ 0.19
TNFRSF4-203ENST00000497869 TINCRA0A1B0GVN0 87 aa16.25■□□□□ 0.19
TNFRSF4-203ENST00000497869 CCL25O15444 150 aa16.25■□□□□ 0.19
TNFRSF4-203ENST00000497869 ZNF22P17026 224 aaPredicted RBP16.25■□□□□ 0.19
TNFRSF4-203ENST00000497869 KRTAP26-1Q6PEX3 210 aa16.25■□□□□ 0.19
TNFRSF4-203ENST00000497869 LINC00476Q8WZB0 136 aa16.25■□□□□ 0.19
TNFRSF4-203ENST00000497869 XCL1P47992 114 aa16.24■□□□□ 0.19
TNFRSF4-203ENST00000497869 CHCHD10Q8WYQ3 142 aaPredicted RBP16.24■□□□□ 0.19
TNFRSF4-203ENST00000497869 DNAH2Q9P225 4427 aa16.24■□□□□ 0.19
TNFRSF4-203ENST00000497869 CDKN2A-AS1Q9UH64 79 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms