RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 TRAV8-3A0A0A6YYJ7 113 aa7.93□□□□□ -1.14
CMSS1-208ENST00000496116 TIRAPP58753 221 aa7.93□□□□□ -1.14
CMSS1-208ENST00000496116 VSIG2Q96IQ7 327 aa7.93□□□□□ -1.14
CMSS1-208ENST00000496116 PRO1854Q9UHT4 67 aa7.93□□□□□ -1.14
CMSS1-208ENST00000496116 TRGV2A0A075B6R0 118 aa7.93□□□□□ -1.14
CMSS1-208ENST00000496116 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.93□□□□□ -1.14
CMSS1-208ENST00000496116 PF4P02776 101 aa7.93□□□□□ -1.14
CMSS1-208ENST00000496116 UBE2D3P61077 147 aa7.93□□□□□ -1.14
CMSS1-208ENST00000496116 UBE2D2P62837 147 aa7.93□□□□□ -1.14
CMSS1-208ENST00000496116 NDUFA12Q9UI09 145 aa7.93□□□□□ -1.14
CMSS1-208ENST00000496116 CSDC2Q9Y534 153 aaKnown RBP7.93□□□□□ -1.14
CMSS1-208ENST00000496116 A4D1N5 150 aa7.92□□□□□ -1.14
CMSS1-208ENST00000496116 SPINK8P0C7L1 97 aa7.92□□□□□ -1.14
CMSS1-208ENST00000496116 MUSTN1Q8IVN3 82 aa7.92□□□□□ -1.14
CMSS1-208ENST00000496116 HERVK_113P63121 156 aa7.91□□□□□ -1.14
CMSS1-208ENST00000496116 WFDC2Q14508 124 aa7.91□□□□□ -1.14
CMSS1-208ENST00000496116 CSNK1G2-AS1Q8NCQ2 148 aa7.91□□□□□ -1.14
CMSS1-208ENST00000496116 TRBV20-1A0A075B6N2 111 aa7.91□□□□□ -1.14
CMSS1-208ENST00000496116 IGLV5-45A0A087WSX0 123 aa7.91□□□□□ -1.14
CMSS1-208ENST00000496116 A0A0B4J2C4 111 aa7.91□□□□□ -1.14
CMSS1-208ENST00000496116 TEX48A0A1B0GUV7 120 aa7.91□□□□□ -1.14
CMSS1-208ENST00000496116 PLAC8L1A1L4L8 177 aa7.91□□□□□ -1.14
CMSS1-208ENST00000496116 GAGE12JA6NER3 117 aa7.91□□□□□ -1.14
CMSS1-208ENST00000496116 J3QR89 54 aa7.91□□□□□ -1.14
CMSS1-208ENST00000496116 GAGE7O76087 117 aa7.91□□□□□ -1.14
CMSS1-208ENST00000496116 GAGE12FP0CL80 117 aa7.91□□□□□ -1.14
CMSS1-208ENST00000496116 GAGE12GP0CL81 117 aa7.91□□□□□ -1.14
CMSS1-208ENST00000496116 GAGE12IP0CL82 117 aa7.91□□□□□ -1.14
CMSS1-208ENST00000496116 PSMB2P49721 201 aa7.91□□□□□ -1.14
CMSS1-208ENST00000496116 GAGE4Q13068 117 aa7.91□□□□□ -1.14
CMSS1-208ENST00000496116 GAGE5Q13069 117 aa7.91□□□□□ -1.14
CMSS1-208ENST00000496116 OVOL2Q9BRP0 275 aa7.91□□□□□ -1.14
CMSS1-208ENST00000496116 GTSF1LQ9H1H1 148 aa7.91□□□□□ -1.14
CMSS1-208ENST00000496116 MTORP42345 2549 aa7.91□□□□□ -1.14
CMSS1-208ENST00000496116 BAHCC1Q9P281 2608 aa7.91□□□□□ -1.14
CMSS1-208ENST00000496116 ITPR2Q14571 2701 aa7.91□□□□□ -1.14
CMSS1-208ENST00000496116 TRBV6-4A0A1B0GX49 114 aa7.9□□□□□ -1.14
CMSS1-208ENST00000496116 ZFAND6Q6FIF0 208 aa7.9□□□□□ -1.14
CMSS1-208ENST00000496116 SMR3AQ99954 134 aa7.9□□□□□ -1.14
CMSS1-208ENST00000496116 CDKN2A-AS1Q9UH64 79 aa7.9□□□□□ -1.14
CMSS1-208ENST00000496116 PRO0461Q9UI25 63 aa7.9□□□□□ -1.14
CMSS1-208ENST00000496116 SETD2Q9BYW2 2564 aaPredicted RBP7.9□□□□□ -1.15
CMSS1-208ENST00000496116 UBE2L6O14933 153 aa7.9□□□□□ -1.15
CMSS1-208ENST00000496116 LINC00694P0DN24 101 aa7.9□□□□□ -1.15
CMSS1-208ENST00000496116 SFTA2Q6UW10 78 aa7.9□□□□□ -1.15
CMSS1-208ENST00000496116 SPANXDQ9BXN6 97 aa7.9□□□□□ -1.15
CMSS1-208ENST00000496116 SPANXCQ9NY87 97 aa7.9□□□□□ -1.15
CMSS1-208ENST00000496116 SCGB1C2P0DMR2 95 aa7.89□□□□□ -1.15
CMSS1-208ENST00000496116 NTM-AS1Q6ZSK4 140 aa7.89□□□□□ -1.15
CMSS1-208ENST00000496116 FAM19A3Q7Z5A8 133 aa7.89□□□□□ -1.15
CMSS1-208ENST00000496116 HIVEP2P31629 2446 aa7.89□□□□□ -1.15
CMSS1-208ENST00000496116 HELZ2Q9BYK8 2649 aaKnown RBP7.89□□□□□ -1.15
CMSS1-208ENST00000496116 UNC79Q9P2D8 2635 aa7.89□□□□□ -1.15
CMSS1-208ENST00000496116 ANK3Q12955 4377 aaKnown RBP7.88□□□□□ -1.15
CMSS1-208ENST00000496116 TRGV4A0A0C4DH28 118 aa7.88□□□□□ -1.15
CMSS1-208ENST00000496116 PRSS2P07478 247 aa7.88□□□□□ -1.15
CMSS1-208ENST00000496116 ETDBQ3ZM63 59 aa7.88□□□□□ -1.15
CMSS1-208ENST00000496116 SBSPONQ8IVN8 264 aa7.88□□□□□ -1.15
CMSS1-208ENST00000496116 TMEM101Q96IK0 257 aa7.88□□□□□ -1.15
CMSS1-208ENST00000496116 LITAFQ99732 161 aa7.88□□□□□ -1.15
CMSS1-208ENST00000496116 ERG28Q9UKR5 140 aa7.88□□□□□ -1.15
CMSS1-208ENST00000496116 TIMM17BO60830 172 aa7.88□□□□□ -1.15
CMSS1-208ENST00000496116 LY6G6DO95868 133 aa7.88□□□□□ -1.15
CMSS1-208ENST00000496116 MIAQ16674 131 aa7.88□□□□□ -1.15
CMSS1-208ENST00000496116 LINC00242Q5T6M2 205 aa7.88□□□□□ -1.15
CMSS1-208ENST00000496116 MTURNQ8N3F0 131 aa7.88□□□□□ -1.15
CMSS1-208ENST00000496116 TMEM243Q9BU79 118 aa7.88□□□□□ -1.15
CMSS1-208ENST00000496116 A8MZ25 164 aa7.87□□□□□ -1.15
CMSS1-208ENST00000496116 H7C423 109 aa7.87□□□□□ -1.15
CMSS1-208ENST00000496116 NDUFA1O15239 70 aa7.87□□□□□ -1.15
CMSS1-208ENST00000496116 IGHV3-33P01772 117 aa7.87□□□□□ -1.15
CMSS1-208ENST00000496116 LINC00482Q8N8I6 264 aa7.87□□□□□ -1.15
CMSS1-208ENST00000496116 CDC42SE2Q9NRR3 84 aa7.87□□□□□ -1.15
CMSS1-208ENST00000496116 TCL1BO95988 128 aa7.87□□□□□ -1.15
CMSS1-208ENST00000496116 KRTAP10-3P60369 221 aa7.87□□□□□ -1.15
CMSS1-208ENST00000496116 COX6A2Q02221 97 aa7.87□□□□□ -1.15
CMSS1-208ENST00000496116 CIRBPQ14011 172 aaKnown RBP7.87□□□□□ -1.15
CMSS1-208ENST00000496116 SH2D6Q7Z4S9 175 aa7.87□□□□□ -1.15
CMSS1-208ENST00000496116 NOTCH3Q9UM47 2321 aa7.86□□□□□ -1.15
CMSS1-208ENST00000496116 TRAV13-1A0A0B4J241 112 aa7.86□□□□□ -1.15
CMSS1-208ENST00000496116 Q1RN00 199 aa7.86□□□□□ -1.15
CMSS1-208ENST00000496116 ADAMTSL4-AS1Q5T5F5 129 aa7.86□□□□□ -1.15
CMSS1-208ENST00000496116 LCE2DQ5TA82 110 aaPredicted RBP7.86□□□□□ -1.15
CMSS1-208ENST00000496116 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.86□□□□□ -1.15
CMSS1-208ENST00000496116 SETXQ7Z333 2677 aaKnown RBP7.86□□□□□ -1.15
CMSS1-208ENST00000496116 IGLV5-39A0A0G2JS06 123 aa7.85□□□□□ -1.15
CMSS1-208ENST00000496116 IFITM1P13164 125 aa7.85□□□□□ -1.15
CMSS1-208ENST00000496116 INSL3P51460 131 aa7.85□□□□□ -1.15
CMSS1-208ENST00000496116 ATP6V0E2Q8NHE4 81 aa7.85□□□□□ -1.15
CMSS1-208ENST00000496116 RNF183Q96D59 192 aa7.85□□□□□ -1.15
CMSS1-208ENST00000496116 JMJD1CQ15652 2540 aa7.85□□□□□ -1.15
CMSS1-208ENST00000496116 H7C2G1 150 aa7.85□□□□□ -1.15
CMSS1-208ENST00000496116 EIF4EBP3O60516 100 aaPredicted RBP7.85□□□□□ -1.15
CMSS1-208ENST00000496116 FHL2Q14192 279 aa7.84□□□□□ -1.15
CMSS1-208ENST00000496116 LOC100131303A0A0U1RQF7 123 aa7.84□□□□□ -1.16
CMSS1-208ENST00000496116 SMIM1B2RUZ4 78 aa7.84□□□□□ -1.16
CMSS1-208ENST00000496116 KIR2DL5BQ8NHK3 375 aa7.84□□□□□ -1.16
CMSS1-208ENST00000496116 FASNP49327 2511 aaKnown RBP7.83□□□□□ -1.16
CMSS1-208ENST00000496116 C4orf48Q5BLP8 95 aa7.83□□□□□ -1.16
CMSS1-208ENST00000496116 C9orf66Q5T8R8 295 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms