RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 OR10J6PQ8NGY7 276 aa1.75□□□□□ -2.13
CDC42EP3-205ENST00000494083 DPH3Q96FX2 82 aa1.75□□□□□ -2.13
CDC42EP3-205ENST00000494083 ENY2Q9NPA8 101 aa1.75□□□□□ -2.13
CDC42EP3-205ENST00000494083 EPPK1P58107 5090 aaKnown RBP1.75□□□□□ -2.13
CDC42EP3-205ENST00000494083 TRAV2A0A0B4J234 112 aa1.75□□□□□ -2.13
CDC42EP3-205ENST00000494083 H3BUA1 57 aa1.75□□□□□ -2.13
CDC42EP3-205ENST00000494083 J3QKU1 62 aa1.75□□□□□ -2.13
CDC42EP3-205ENST00000494083 PFN2P35080 140 aa1.75□□□□□ -2.13
CDC42EP3-205ENST00000494083 MIAQ16674 131 aa1.75□□□□□ -2.13
CDC42EP3-205ENST00000494083 METTL26Q96S19 204 aa1.75□□□□□ -2.13
CDC42EP3-205ENST00000494083 TTTY13Q9BZ97 58 aa1.75□□□□□ -2.13
CDC42EP3-205ENST00000494083 CABIN1Q9Y6J0 2220 aa1.75□□□□□ -2.13
CDC42EP3-205ENST00000494083 LOC110117498A0A087WWA1 95 aa1.74□□□□□ -2.13
CDC42EP3-205ENST00000494083 M0QY20 66 aa1.74□□□□□ -2.13
CDC42EP3-205ENST00000494083 LY6HO94772 140 aa1.74□□□□□ -2.13
CDC42EP3-205ENST00000494083 IGHV3-9P01782 118 aa1.74□□□□□ -2.13
CDC42EP3-205ENST00000494083 UBE2E1P51965 193 aa1.74□□□□□ -2.13
CDC42EP3-205ENST00000494083 ERVK-16P61578 105 aa1.74□□□□□ -2.13
CDC42EP3-205ENST00000494083 DEFB133Q30KQ1 61 aa1.74□□□□□ -2.13
CDC42EP3-205ENST00000494083 ADAMTSL4-AS1Q5T5F5 129 aa1.74□□□□□ -2.13
CDC42EP3-205ENST00000494083 LINC00242Q5T6M2 205 aa1.74□□□□□ -2.13
CDC42EP3-205ENST00000494083 EXOC3-AS1Q8N2X6 119 aa1.74□□□□□ -2.13
CDC42EP3-205ENST00000494083 SMIM20Q8N5G0 67 aa1.74□□□□□ -2.13
CDC42EP3-205ENST00000494083 LINC00612Q8N6U2 182 aa1.74□□□□□ -2.13
CDC42EP3-205ENST00000494083 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP1.74□□□□□ -2.13
CDC42EP3-205ENST00000494083 UBE2E2Q96LR5 201 aa1.74□□□□□ -2.13
CDC42EP3-205ENST00000494083 ANAPC13Q9BS18 74 aa1.74□□□□□ -2.13
CDC42EP3-205ENST00000494083 NHP2Q9NX24 153 aaKnown RBP1.74□□□□□ -2.13
CDC42EP3-205ENST00000494083 KNTC1P50748 2209 aa1.74□□□□□ -2.13
CDC42EP3-205ENST00000494083 OTOGQ6ZRI0 2925 aa1.74□□□□□ -2.13
CDC42EP3-205ENST00000494083 IGHV4-30-2A0A087WSY4 118 aa1.74□□□□□ -2.13
CDC42EP3-205ENST00000494083 TRAV17A0A0B4J275 112 aa1.74□□□□□ -2.13
CDC42EP3-205ENST00000494083 IGHV3-64DA0A0J9YX35 117 aa1.74□□□□□ -2.13
CDC42EP3-205ENST00000494083 TRBV7-4A0A0J9YYF1 115 aa1.74□□□□□ -2.13
CDC42EP3-205ENST00000494083 M0R1W7 72 aa1.74□□□□□ -2.13
CDC42EP3-205ENST00000494083 UQCRQO14949 82 aa1.74□□□□□ -2.13
CDC42EP3-205ENST00000494083 COX7CP15954 63 aa1.74□□□□□ -2.13
CDC42EP3-205ENST00000494083 RPL28P46779 137 aaKnown RBP1.74□□□□□ -2.13
CDC42EP3-205ENST00000494083 DSCR10P59022 87 aa1.74□□□□□ -2.13
CDC42EP3-205ENST00000494083 SOSTDC1Q6X4U4 206 aa1.74□□□□□ -2.13
CDC42EP3-205ENST00000494083 ZNF826PQ6ZT77 177 aa1.74□□□□□ -2.13
CDC42EP3-205ENST00000494083 FP248Q71RG6 208 aaPredicted RBP1.74□□□□□ -2.13
CDC42EP3-205ENST00000494083 C11orf72Q8NBR9 251 aa1.74□□□□□ -2.13
CDC42EP3-205ENST00000494083 NAV3Q8IVL0 2385 aa1.74□□□□□ -2.13
CDC42EP3-205ENST00000494083 PDZD2O15018 2839 aa1.74□□□□□ -2.13
CDC42EP3-205ENST00000494083 CHD6Q8TD26 2715 aa1.74□□□□□ -2.13
CDC42EP3-205ENST00000494083 PRRC2AP48634 2157 aaKnown RBP1.74□□□□□ -2.13
CDC42EP3-205ENST00000494083 IGKV2-28A0A075B6P5 120 aa1.74□□□□□ -2.13
CDC42EP3-205ENST00000494083 TRAV8-1A0A0A6YYK1 113 aa1.74□□□□□ -2.13
CDC42EP3-205ENST00000494083 IGHV3-43A0A0B4J1X8 118 aa1.74□□□□□ -2.13
CDC42EP3-205ENST00000494083 TRAV8-4A0A0B4J246 113 aa1.74□□□□□ -2.13
CDC42EP3-205ENST00000494083 DEFB108AA8MXU0 73 aa1.74□□□□□ -2.13
CDC42EP3-205ENST00000494083 IGKV2D-28P01615 120 aa1.74□□□□□ -2.13
CDC42EP3-205ENST00000494083 IGHV3-43DP0DP04 118 aa1.74□□□□□ -2.13
CDC42EP3-205ENST00000494083 ORMDL2Q53FV1 153 aa1.74□□□□□ -2.13
CDC42EP3-205ENST00000494083 KRTAP5-4Q6L8H1 288 aa1.74□□□□□ -2.13
CDC42EP3-205ENST00000494083 ZNRF1Q8ND25 227 aa1.74□□□□□ -2.13
CDC42EP3-205ENST00000494083 PRADC1Q9BSG0 188 aa1.74□□□□□ -2.13
CDC42EP3-205ENST00000494083 ZNRD1Q9P1U0 126 aa1.74□□□□□ -2.13
CDC42EP3-205ENST00000494083 HIGD1AQ9Y241 93 aa1.74□□□□□ -2.13
CDC42EP3-205ENST00000494083 GPR98Q8WXG9 6306 aa1.73□□□□□ -2.13
CDC42EP3-205ENST00000494083 IGLV4-3A0A075B6K6 122 aa1.73□□□□□ -2.13
CDC42EP3-205ENST00000494083 TRBV7-6A0A0J9YX20 115 aa1.73□□□□□ -2.13
CDC42EP3-205ENST00000494083 K7EMT4 169 aa1.73□□□□□ -2.13
CDC42EP3-205ENST00000494083 TMEM258P61165 79 aa1.73□□□□□ -2.13
CDC42EP3-205ENST00000494083 HES3Q5TGS1 186 aa1.73□□□□□ -2.13
CDC42EP3-205ENST00000494083 MRPL55Q7Z7F7 128 aaKnown RBP1.73□□□□□ -2.13
CDC42EP3-205ENST00000494083 C6orf223Q8N319 242 aa1.73□□□□□ -2.13
CDC42EP3-205ENST00000494083 UBE2D4Q9Y2X8 147 aa1.73□□□□□ -2.13
CDC42EP3-205ENST00000494083 ARFGEF3Q5TH69 2177 aa1.73□□□□□ -2.13
CDC42EP3-205ENST00000494083 IGHV7-81A0A0B4J1V7 117 aa1.73□□□□□ -2.13
CDC42EP3-205ENST00000494083 TRAV40A0A0B4J280 105 aa1.73□□□□□ -2.13
CDC42EP3-205ENST00000494083 MRPL33O75394 65 aaKnown RBP1.73□□□□□ -2.13
CDC42EP3-205ENST00000494083 HES1Q14469 280 aa1.73□□□□□ -2.13
CDC42EP3-205ENST00000494083 CEMP1Q6PRD7 247 aaPredicted RBP1.73□□□□□ -2.13
CDC42EP3-205ENST00000494083 Q8N9W7 124 aa1.73□□□□□ -2.13
CDC42EP3-205ENST00000494083 PRO1854Q9UHT4 67 aa1.73□□□□□ -2.13
CDC42EP3-205ENST00000494083 CFAP46Q8IYW2 2715 aa1.73□□□□□ -2.13
CDC42EP3-205ENST00000494083 IGHV3-16A0A0C4DH30 117 aa1.73□□□□□ -2.13
CDC42EP3-205ENST00000494083 LOC389332A0A1B0GUA5 103 aa1.73□□□□□ -2.13
CDC42EP3-205ENST00000494083 ECSCRQ19T08 205 aa1.73□□□□□ -2.13
CDC42EP3-205ENST00000494083 ASB16-AS1Q495Z4 193 aa1.73□□□□□ -2.13
CDC42EP3-205ENST00000494083 C9orf129Q5T035 196 aaKnown RBP1.73□□□□□ -2.13
CDC42EP3-205ENST00000494083 TMEM86BQ8N661 226 aa1.73□□□□□ -2.13
CDC42EP3-205ENST00000494083 VSIG2Q96IQ7 327 aa1.73□□□□□ -2.13
CDC42EP3-205ENST00000494083 APOBP04114 4563 aaKnown RBP1.72□□□□□ -2.13
CDC42EP3-205ENST00000494083 ASXL3Q9C0F0 2248 aa1.72□□□□□ -2.13
CDC42EP3-205ENST00000494083 PLAC8L1A1L4L8 177 aa1.72□□□□□ -2.13
CDC42EP3-205ENST00000494083 H7BZZ5 65 aa1.72□□□□□ -2.13
CDC42EP3-205ENST00000494083 FXYD7P58549 80 aa1.72□□□□□ -2.13
CDC42EP3-205ENST00000494083 LINC00643Q86TS7 51 aa1.72□□□□□ -2.13
CDC42EP3-205ENST00000494083 TEX29Q8N6K0 151 aa1.72□□□□□ -2.13
CDC42EP3-205ENST00000494083 FAM57AQ8TBR7 257 aa1.72□□□□□ -2.13
CDC42EP3-205ENST00000494083 RNASE6Q93091 150 aaKnown RBP1.72□□□□□ -2.13
CDC42EP3-205ENST00000494083 FAM186AA6NE01 2351 aa1.72□□□□□ -2.13
CDC42EP3-205ENST00000494083 IGHV4-61A0A0C4DH41 118 aa1.72□□□□□ -2.13
CDC42EP3-205ENST00000494083 NCBP2LA6PVI3 153 aaKnown RBP1.72□□□□□ -2.13
CDC42EP3-205ENST00000494083 F6UB75 175 aa1.72□□□□□ -2.13
CDC42EP3-205ENST00000494083 SLC25A20O43772 301 aa1.72□□□□□ -2.13
CDC42EP3-205ENST00000494083 RBMY1A1P0DJD3 496 aaKnown RBP1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms