RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 IGLV5-52A0A0A0MRZ9 124 aa6.96□□□□□ -1.3
TTC28-207ENST00000490475 TRAV8-3A0A0A6YYJ7 113 aa6.96□□□□□ -1.3
TTC28-207ENST00000490475 F5H697 171 aa6.96□□□□□ -1.3
TTC28-207ENST00000490475 INAFM2P0DMQ5 153 aa6.96□□□□□ -1.3
TTC28-207ENST00000490475 NTF3P20783 257 aa6.96□□□□□ -1.3
TTC28-207ENST00000490475 XGP55808 180 aa6.96□□□□□ -1.3
TTC28-207ENST00000490475 RIGQ13278 110 aa6.96□□□□□ -1.3
TTC28-207ENST00000490475 KIAA1644Q3SXP7 199 aa6.96□□□□□ -1.3
TTC28-207ENST00000490475 GTSF1Q8WW33 167 aa6.96□□□□□ -1.3
TTC28-207ENST00000490475 SMIM17P0DL12 118 aa6.95□□□□□ -1.3
TTC28-207ENST00000490475 CACNG7P62955 275 aa6.95□□□□□ -1.3
TTC28-207ENST00000490475 ZNF56Q15929 161 aa6.95□□□□□ -1.3
TTC28-207ENST00000490475 Q5VSD8 79 aa6.95□□□□□ -1.3
TTC28-207ENST00000490475 SMIM15Q7Z3B0 74 aa6.95□□□□□ -1.3
TTC28-207ENST00000490475 DNAH5Q8TE73 4624 aa6.95□□□□□ -1.3
TTC28-207ENST00000490475 A0A1B0GUT8 65 aa6.94□□□□□ -1.3
TTC28-207ENST00000490475 LRCOL1A6NCL2 159 aa6.94□□□□□ -1.3
TTC28-207ENST00000490475 SYS1-DBNDD2H3BUS1 97 aa6.94□□□□□ -1.3
TTC28-207ENST00000490475 LEPROTL1O95214 131 aa6.94□□□□□ -1.3
TTC28-207ENST00000490475 LINC00694P0DN24 101 aa6.94□□□□□ -1.3
TTC28-207ENST00000490475 KRTAP10-1P60331 282 aa6.94□□□□□ -1.3
TTC28-207ENST00000490475 TWIST1Q15672 202 aa6.94□□□□□ -1.3
TTC28-207ENST00000490475 Q8N814 137 aa6.94□□□□□ -1.3
TTC28-207ENST00000490475 RMI2Q96E14 147 aa6.94□□□□□ -1.3
TTC28-207ENST00000490475 PGLYRP4Q96LB8 373 aa6.94□□□□□ -1.3
TTC28-207ENST00000490475 AP1S3Q96PC3 154 aa6.94□□□□□ -1.3
TTC28-207ENST00000490475 MAP1LC3CQ9BXW4 147 aa6.94□□□□□ -1.3
TTC28-207ENST00000490475 TRBV10-1A0A0K0K1A3 114 aa6.93□□□□□ -1.3
TTC28-207ENST00000490475 MGPP08493 103 aa6.93□□□□□ -1.3
TTC28-207ENST00000490475 G0S2P27469 103 aa6.93□□□□□ -1.3
TTC28-207ENST00000490475 RNASEKQ6P5S7 137 aaKnown RBP6.93□□□□□ -1.3
TTC28-207ENST00000490475 NEXN-AS1Q8NBZ9 246 aa6.93□□□□□ -1.3
TTC28-207ENST00000490475 Q9HAA7 133 aa6.93□□□□□ -1.3
TTC28-207ENST00000490475 APOBP04114 4563 aaKnown RBP6.93□□□□□ -1.3
TTC28-207ENST00000490475 TRBV7-3A0A075B6L6 115 aa6.92□□□□□ -1.3
TTC28-207ENST00000490475 CAMPP49913 170 aa6.92□□□□□ -1.3
TTC28-207ENST00000490475 UBE2D3P61077 147 aa6.92□□□□□ -1.3
TTC28-207ENST00000490475 UBE2D2P62837 147 aa6.92□□□□□ -1.3
TTC28-207ENST00000490475 RPL36AP83881 106 aaKnown RBP6.92□□□□□ -1.3
TTC28-207ENST00000490475 FAM19A2Q8N3H0 131 aa6.92□□□□□ -1.3
TTC28-207ENST00000490475 RPL36ALQ969Q0 106 aaKnown RBP6.92□□□□□ -1.3
TTC28-207ENST00000490475 CNFNQ9BYD5 112 aa6.92□□□□□ -1.3
TTC28-207ENST00000490475 IGHV1-24A0A0C4DH33 117 aa6.91□□□□□ -1.3
TTC28-207ENST00000490475 M0QY20 66 aa6.91□□□□□ -1.3
TTC28-207ENST00000490475 IGHV3-30P01768 117 aa6.91□□□□□ -1.3
TTC28-207ENST00000490475 IGHV3-33P01772 117 aa6.91□□□□□ -1.3
TTC28-207ENST00000490475 IGHV3-30-3P0DP02 117 aa6.91□□□□□ -1.3
TTC28-207ENST00000490475 IGHV3-30-5P0DP03 117 aa6.91□□□□□ -1.3
TTC28-207ENST00000490475 UBE2V1Q13404 147 aa6.91□□□□□ -1.3
TTC28-207ENST00000490475 LINC01545Q5VT33 79 aa6.91□□□□□ -1.3
TTC28-207ENST00000490475 SUMO4Q6EEV6 95 aa6.91□□□□□ -1.3
TTC28-207ENST00000490475 CFAP161Q6P656 301 aa6.91□□□□□ -1.3
TTC28-207ENST00000490475 SLC25A34Q6PIV7 304 aa6.91□□□□□ -1.3
TTC28-207ENST00000490475 URB1-AS1Q96HZ7 61 aa6.91□□□□□ -1.3
TTC28-207ENST00000490475 CHCHD7Q9BUK0 85 aa6.91□□□□□ -1.3
TTC28-207ENST00000490475 PPBPP02775 128 aa6.9□□□□□ -1.3
TTC28-207ENST00000490475 FUSP35637 526 aaKnown RBP eCLIP6.9□□□□□ -1.3
TTC28-207ENST00000490475 RBX1P62877 108 aa6.9□□□□□ -1.3
TTC28-207ENST00000490475 Q8N3U1 123 aa6.9□□□□□ -1.3
TTC28-207ENST00000490475 STPG4Q8N801 248 aa6.9□□□□□ -1.3
TTC28-207ENST00000490475 DPH3P1Q9H4G8 78 aa6.9□□□□□ -1.3
TTC28-207ENST00000490475 AP5S1Q9NUS5 200 aa6.9□□□□□ -1.3
TTC28-207ENST00000490475 PLA2G1BP04054 148 aaKnown RBP6.89□□□□□ -1.31
TTC28-207ENST00000490475 NPSP0C0P6 89 aa6.89□□□□□ -1.31
TTC28-207ENST00000490475 BATFQ16520 125 aa6.89□□□□□ -1.31
TTC28-207ENST00000490475 MAJINQ3KP22 176 aa6.89□□□□□ -1.31
TTC28-207ENST00000490475 SRRM2Q9UQ35 2752 aaKnown RBP6.88□□□□□ -1.31
TTC28-207ENST00000490475 TRAV26-2A0A0B4J265 109 aa6.88□□□□□ -1.31
TTC28-207ENST00000490475 PTTG1IPP53801 180 aa6.88□□□□□ -1.31
TTC28-207ENST00000490475 SEC11AP67812 179 aa6.88□□□□□ -1.31
TTC28-207ENST00000490475 FA2HQ7L5A8 372 aa6.88□□□□□ -1.31
TTC28-207ENST00000490475 DEFB104AQ8WTQ1 72 aa6.88□□□□□ -1.31
TTC28-207ENST00000490475 FLG2Q5D862 2391 aaPredicted RBP6.87□□□□□ -1.31
TTC28-207ENST00000490475 A0A087WX48 190 aa6.87□□□□□ -1.31
TTC28-207ENST00000490475 LINC01546A6NGU7 62 aa6.87□□□□□ -1.31
TTC28-207ENST00000490475 H7C1H1 209 aa6.87□□□□□ -1.31
TTC28-207ENST00000490475 SMR3BP02814 79 aaPredicted RBP6.87□□□□□ -1.31
TTC28-207ENST00000490475 COX8AP10176 69 aa6.87□□□□□ -1.31
TTC28-207ENST00000490475 C14orf177Q52M58 125 aa6.87□□□□□ -1.31
TTC28-207ENST00000490475 NTM-AS1Q6ZSK4 140 aa6.87□□□□□ -1.31
TTC28-207ENST00000490475 DNAJC30Q96LL9 226 aa6.87□□□□□ -1.31
TTC28-207ENST00000490475 TRBV6-8A0A0A6YYG3 113 aa6.86□□□□□ -1.31
TTC28-207ENST00000490475 GAS8-AS1O95177 125 aa6.86□□□□□ -1.31
TTC28-207ENST00000490475 FAM104BQ5XKR9 115 aa6.86□□□□□ -1.31
TTC28-207ENST00000490475 Q6ZSA8 131 aa6.86□□□□□ -1.31
TTC28-207ENST00000490475 DAZ4Q86SG3 579 aaKnown RBP6.86□□□□□ -1.31
TTC28-207ENST00000490475 ORMDL3Q8N138 153 aa6.86□□□□□ -1.31
TTC28-207ENST00000490475 PRSS3P2Q8NHM4 247 aa6.86□□□□□ -1.31
TTC28-207ENST00000490475 DAZ3Q9NR90 486 aaKnown RBP6.86□□□□□ -1.31
TTC28-207ENST00000490475 TMEM262E9PQX1 116 aa6.85□□□□□ -1.31
TTC28-207ENST00000490475 HINT1P49773 126 aaPredicted RBP6.85□□□□□ -1.31
TTC28-207ENST00000490475 TMEM97Q5BJF2 176 aa6.85□□□□□ -1.31
TTC28-207ENST00000490475 BVES-AS1Q5T3Y7 98 aa6.85□□□□□ -1.31
TTC28-207ENST00000490475 RPL39LQ96EH5 51 aaKnown RBP6.85□□□□□ -1.31
TTC28-207ENST00000490475 IGKV2D-24A0A075B6R9 120 aa6.84□□□□□ -1.31
TTC28-207ENST00000490475 AMN1Q8IY45 258 aa6.84□□□□□ -1.31
TTC28-207ENST00000490475 ATOH7Q8N100 152 aa6.84□□□□□ -1.31
TTC28-207ENST00000490475 RNF185Q96GF1 192 aa6.84□□□□□ -1.31
TTC28-207ENST00000490475 CHCHD5Q9BSY4 110 aa6.84□□□□□ -1.31
TTC28-207ENST00000490475 J3QL48 77 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms