RNA–Protein interactions for RNA: ENST00000490192.1

TM9SF3-206, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 4

Gene TM9SF3, Length 884 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-206ENST00000490192 RBBP6Q7Z6E9 1792 aaKnown RBP2.2□□□□□ -2.06
TM9SF3-206ENST00000490192 LRP6O75581 1613 aa2.2□□□□□ -2.06
TM9SF3-206ENST00000490192 ABCA3Q99758 1704 aa2.2□□□□□ -2.06
TM9SF3-206ENST00000490192 TOGARAM1Q9Y4F4 1720 aa2.2□□□□□ -2.06
TM9SF3-206ENST00000490192 RGPD2P0DJD1 1756 aa2.19□□□□□ -2.06
TM9SF3-206ENST00000490192 C20orf197Q8N268 126 aa2.19□□□□□ -2.06
TM9SF3-206ENST00000490192 PPP3R2Q96LZ3 170 aa2.19□□□□□ -2.06
TM9SF3-206ENST00000490192 NHSL1Q5SYE7 1610 aa2.19□□□□□ -2.06
TM9SF3-206ENST00000490192 ESPL1Q14674 2120 aa2.18□□□□□ -2.06
TM9SF3-206ENST00000490192 HMCN1Q96RW7 5635 aa2.18□□□□□ -2.06
TM9SF3-206ENST00000490192 NUP188Q5SRE5 1749 aa2.18□□□□□ -2.06
TM9SF3-206ENST00000490192 A0A1W2PPM0 123 aa2.18□□□□□ -2.06
TM9SF3-206ENST00000490192 DSCR8Q96T75 97 aa2.18□□□□□ -2.06
TM9SF3-206ENST00000490192 PLCH1Q4KWH8 1693 aa2.18□□□□□ -2.06
TM9SF3-206ENST00000490192 SCN11AQ9UI33 1791 aa2.18□□□□□ -2.06
TM9SF3-206ENST00000490192 CICQ96RK0 1608 aaPredicted RBP2.17□□□□□ -2.06
TM9SF3-206ENST00000490192 ARFGEF2Q9Y6D5 1785 aa2.17□□□□□ -2.06
TM9SF3-206ENST00000490192 COL14A1Q05707 1796 aaKnown RBP2.16□□□□□ -2.06
TM9SF3-206ENST00000490192 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.16□□□□□ -2.06
TM9SF3-206ENST00000490192 CCL3L1P16619 93 aa2.16□□□□□ -2.06
TM9SF3-206ENST00000490192 UBE2D1P51668 147 aa2.16□□□□□ -2.06
TM9SF3-206ENST00000490192 KLKP1Q107X0 134 aa2.16□□□□□ -2.06
TM9SF3-206ENST00000490192 GTF2H5Q6ZYL4 71 aa2.16□□□□□ -2.06
TM9SF3-206ENST00000490192 SPANXDQ9BXN6 97 aa2.16□□□□□ -2.06
TM9SF3-206ENST00000490192 COA4Q9NYJ1 87 aa2.16□□□□□ -2.06
TM9SF3-206ENST00000490192 BET1LQ9NYM9 111 aa2.16□□□□□ -2.06
TM9SF3-206ENST00000490192 NRAPQ86VF7 1730 aa2.16□□□□□ -2.06
TM9SF3-206ENST00000490192 TIAM2Q8IVF5 1701 aa2.15□□□□□ -2.07
TM9SF3-206ENST00000490192 CCL8P80075 99 aa2.15□□□□□ -2.07
TM9SF3-206ENST00000490192 SMIM5Q71RC9 77 aa2.15□□□□□ -2.07
TM9SF3-206ENST00000490192 C8orf59Q8N0T1 100 aaPredicted RBP2.15□□□□□ -2.07
TM9SF3-206ENST00000490192 PPP1R1CQ8WVI7 109 aa2.15□□□□□ -2.07
TM9SF3-206ENST00000490192 RGPD5Q99666 1765 aa2.15□□□□□ -2.07
TM9SF3-206ENST00000490192 ROBO1Q9Y6N7 1651 aa2.15□□□□□ -2.07
TM9SF3-206ENST00000490192 HCG22E2RYF7 251 aa2.14□□□□□ -2.07
TM9SF3-206ENST00000490192 RBP2P50120 134 aa2.14□□□□□ -2.07
TM9SF3-206ENST00000490192 ELOF1P60002 83 aaKnown RBP2.14□□□□□ -2.07
TM9SF3-206ENST00000490192 C10orf99Q6UWK7 81 aa2.14□□□□□ -2.07
TM9SF3-206ENST00000490192 SVBPQ8N300 66 aa2.14□□□□□ -2.07
TM9SF3-206ENST00000490192 DDX60Q8IY21 1712 aaKnown RBP2.14□□□□□ -2.07
TM9SF3-206ENST00000490192 NWD2Q9ULI1 1742 aa2.14□□□□□ -2.07
TM9SF3-206ENST00000490192 ROS1P08922 2347 aa2.13□□□□□ -2.07
TM9SF3-206ENST00000490192 WNK3Q9BYP7 1800 aa2.13□□□□□ -2.07
TM9SF3-206ENST00000490192 TRAV13-2A0A0B4J235 113 aa2.13□□□□□ -2.07
TM9SF3-206ENST00000490192 ARL14EPLP0DKL9 152 aa2.13□□□□□ -2.07
TM9SF3-206ENST00000490192 SSBP1Q04837 148 aaKnown RBP2.13□□□□□ -2.07
TM9SF3-206ENST00000490192 ZNF818PQ6ZRF7 136 aa2.13□□□□□ -2.07
TM9SF3-206ENST00000490192 C4orf33Q8N1A6 199 aa2.13□□□□□ -2.07
TM9SF3-206ENST00000490192 COX7B2Q8TF08 81 aa2.13□□□□□ -2.07
TM9SF3-206ENST00000490192 DOT1LQ8TEK3 1739 aa2.13□□□□□ -2.07
TM9SF3-206ENST00000490192 ARAP2Q8WZ64 1704 aa2.13□□□□□ -2.07
TM9SF3-206ENST00000490192 CNTRLQ7Z7A1 2325 aa2.13□□□□□ -2.07
TM9SF3-206ENST00000490192 MUC6Q6W4X9 2439 aa2.12□□□□□ -2.07
TM9SF3-206ENST00000490192 SCN7AQ01118 1682 aa2.12□□□□□ -2.07
TM9SF3-206ENST00000490192 ZNF831Q5JPB2 1677 aa2.12□□□□□ -2.07
TM9SF3-206ENST00000490192 NRXN2Q9P2S2 1712 aa2.12□□□□□ -2.07
TM9SF3-206ENST00000490192 DUOX1Q9NRD9 1551 aa2.12□□□□□ -2.07
TM9SF3-206ENST00000490192 UQCRHLA0A096LP55 91 aa2.12□□□□□ -2.07
TM9SF3-206ENST00000490192 UQCRHP07919 91 aa2.12□□□□□ -2.07
TM9SF3-206ENST00000490192 KRTAP10-4P60372 401 aaPredicted RBP2.12□□□□□ -2.07
TM9SF3-206ENST00000490192 Q8N6K4 173 aa2.12□□□□□ -2.07
TM9SF3-206ENST00000490192 TMEM14BQ9NUH8 114 aa2.12□□□□□ -2.07
TM9SF3-206ENST00000490192 TNRC6CQ9HCJ0 1690 aaKnown RBP2.12□□□□□ -2.07
TM9SF3-206ENST00000490192 C4AP0C0L4 1744 aa2.11□□□□□ -2.07
TM9SF3-206ENST00000490192 C4BP0C0L5 1744 aa2.11□□□□□ -2.07
TM9SF3-206ENST00000490192 BCORQ6W2J9 1755 aa2.11□□□□□ -2.07
TM9SF3-206ENST00000490192 IFITM1P13164 125 aa2.11□□□□□ -2.07
TM9SF3-206ENST00000490192 KRTAP21-2Q3LI59 83 aa2.11□□□□□ -2.07
TM9SF3-206ENST00000490192 C5orf38Q86SI9 138 aa2.11□□□□□ -2.07
TM9SF3-206ENST00000490192 LINC00312Q9Y6C7 94 aa2.11□□□□□ -2.07
TM9SF3-206ENST00000490192 ANKRD36CQ5JPF3 1778 aa2.1□□□□□ -2.07
TM9SF3-206ENST00000490192 C10orf71Q711Q0 1435 aa2.1□□□□□ -2.07
TM9SF3-206ENST00000490192 PLXNA1Q9UIW2 1896 aa2.1□□□□□ -2.07
TM9SF3-206ENST00000490192 NHSQ6T4R5 1651 aa2.1□□□□□ -2.07
TM9SF3-206ENST00000490192 CLPSL1A2RUU4 121 aa2.1□□□□□ -2.07
TM9SF3-206ENST00000490192 RBAKDNA6NC62 111 aa2.1□□□□□ -2.07
TM9SF3-206ENST00000490192 SIX6O95475 246 aa2.1□□□□□ -2.07
TM9SF3-206ENST00000490192 SMIM6P0DI80 62 aa2.1□□□□□ -2.07
TM9SF3-206ENST00000490192 HSD52Q0P140 79 aa2.1□□□□□ -2.07
TM9SF3-206ENST00000490192 FAM74A4Q5TZK3 123 aa2.1□□□□□ -2.07
TM9SF3-206ENST00000490192 PLAC4Q8WY50 150 aa2.1□□□□□ -2.07
TM9SF3-206ENST00000490192 PHIPQ8WWQ0 1821 aa2.1□□□□□ -2.07
TM9SF3-206ENST00000490192 DOCK2Q92608 1830 aa2.1□□□□□ -2.07
TM9SF3-206ENST00000490192 PLIN4Q96Q06 1357 aa2.1□□□□□ -2.07
TM9SF3-206ENST00000490192 KIAA1551Q9HCM1 1747 aa2.09□□□□□ -2.07
TM9SF3-206ENST00000490192 TRBV7-1A0A0A6YYK4 115 aa2.09□□□□□ -2.07
TM9SF3-206ENST00000490192 LAMA4Q16363 1823 aa2.09□□□□□ -2.08
TM9SF3-206ENST00000490192 DDX60LQ5H9U9 1706 aaKnown RBP2.08□□□□□ -2.08
TM9SF3-206ENST00000490192 A0A1B0GUL6 1792 aa2.08□□□□□ -2.08
TM9SF3-206ENST00000490192 A0A087WTM6 91 aa2.08□□□□□ -2.08
TM9SF3-206ENST00000490192 FAM24AA6NFZ4 105 aa2.08□□□□□ -2.08
TM9SF3-206ENST00000490192 ZDBF2Q9HCK1 2354 aa2.08□□□□□ -2.08
TM9SF3-206ENST00000490192 LRRC37AA6NMS7 1700 aa2.08□□□□□ -2.08
TM9SF3-206ENST00000490192 SPINK8P0C7L1 97 aa2.07□□□□□ -2.08
TM9SF3-206ENST00000490192 AQP10Q96PS8 301 aa2.07□□□□□ -2.08
TM9SF3-206ENST00000490192 LY75O60449 1722 aa2.06□□□□□ -2.08
TM9SF3-206ENST00000490192 QSER1Q2KHR3 1735 aa2.06□□□□□ -2.08
TM9SF3-206ENST00000490192 BTAF1O14981 1849 aa2.06□□□□□ -2.08
TM9SF3-206ENST00000490192 PARP14Q460N5 1801 aa2.06□□□□□ -2.08
TM9SF3-206ENST00000490192 TMEM218A2RU14 115 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms