RNA–Protein interactions for RNA: ENST00000490175.5

SNX5-214, Transcript of sorting nexin 5, humanhuman

TSL 1 (best)

Gene SNX5, Length 2,025 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-214ENST00000490175 PLEKHB2Q96CS7 222 aa11.49□□□□□ -0.57
SNX5-214ENST00000490175 PRO0461Q9UI25 63 aa11.49□□□□□ -0.57
SNX5-214ENST00000490175 NSD1Q96L73 2696 aaPredicted RBP11.49□□□□□ -0.57
SNX5-214ENST00000490175 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.48□□□□□ -0.57
SNX5-214ENST00000490175 IGKV2-29A2NJV5 120 aaPredicted RBP11.48□□□□□ -0.57
SNX5-214ENST00000490175 LGALS3P17931 250 aaKnown RBP11.48□□□□□ -0.57
SNX5-214ENST00000490175 CEMP1Q6PRD7 247 aaPredicted RBP11.48□□□□□ -0.57
SNX5-214ENST00000490175 SLC25A29Q8N8R3 303 aa11.48□□□□□ -0.57
SNX5-214ENST00000490175 NIPBLQ6KC79 2804 aaeCLIP11.48□□□□□ -0.57
SNX5-214ENST00000490175 TRGV2A0A075B6R0 118 aa11.48□□□□□ -0.57
SNX5-214ENST00000490175 TSPEAR-AS2P59090 65 aa11.48□□□□□ -0.57
SNX5-214ENST00000490175 UBE2D3P61077 147 aa11.48□□□□□ -0.57
SNX5-214ENST00000490175 UBE2D2P62837 147 aa11.48□□□□□ -0.57
SNX5-214ENST00000490175 LYRM7Q5U5X0 104 aa11.48□□□□□ -0.57
SNX5-214ENST00000490175 SH2D6Q7Z4S9 175 aa11.48□□□□□ -0.57
SNX5-214ENST00000490175 JMJD1CQ15652 2540 aa11.48□□□□□ -0.57
SNX5-214ENST00000490175 TINCRA0A1B0GVN0 87 aa11.47□□□□□ -0.57
SNX5-214ENST00000490175 GAGE12HA6NDE8 117 aa11.47□□□□□ -0.57
SNX5-214ENST00000490175 A0A0J9YY99 117 aa11.47□□□□□ -0.57
SNX5-214ENST00000490175 TRBV6-4A0A1B0GX49 114 aa11.47□□□□□ -0.57
SNX5-214ENST00000490175 GAGE7O76087 117 aa11.47□□□□□ -0.57
SNX5-214ENST00000490175 GAGE12FP0CL80 117 aa11.47□□□□□ -0.57
SNX5-214ENST00000490175 GAGE12GP0CL81 117 aa11.47□□□□□ -0.57
SNX5-214ENST00000490175 GAGE12IP0CL82 117 aa11.47□□□□□ -0.57
SNX5-214ENST00000490175 SMAGPQ0VAQ4 97 aa11.46□□□□□ -0.57
SNX5-214ENST00000490175 CITED1Q99966 193 aa11.46□□□□□ -0.57
SNX5-214ENST00000490175 C2CD3Q4AC94 2353 aa11.46□□□□□ -0.58
SNX5-214ENST00000490175 Q6ZUT4 128 aa11.45□□□□□ -0.58
SNX5-214ENST00000490175 SPATA25Q9BR10 227 aa11.45□□□□□ -0.58
SNX5-214ENST00000490175 TSPAN13O95857 204 aa11.45□□□□□ -0.58
SNX5-214ENST00000490175 DGAT2L7PQ6IED9 249 aa11.45□□□□□ -0.58
SNX5-214ENST00000490175 ATP6V0E2Q8NHE4 81 aa11.45□□□□□ -0.58
SNX5-214ENST00000490175 GTSF1LQ9H1H1 148 aa11.45□□□□□ -0.58
SNX5-214ENST00000490175 CSDC2Q9Y534 153 aaKnown RBP11.45□□□□□ -0.58
SNX5-214ENST00000490175 FN1P02751 2386 aaKnown RBP11.44□□□□□ -0.58
SNX5-214ENST00000490175 LOC107984156A0A0G2JMH3 177 aa11.43□□□□□ -0.58
SNX5-214ENST00000490175 GAGE12JA6NER3 117 aa11.43□□□□□ -0.58
SNX5-214ENST00000490175 GAGE4Q13068 117 aa11.43□□□□□ -0.58
SNX5-214ENST00000490175 GAGE5Q13069 117 aa11.43□□□□□ -0.58
SNX5-214ENST00000490175 ARL17AQ8IVW1 177 aa11.43□□□□□ -0.58
SNX5-214ENST00000490175 SMIM9A6NGZ8 99 aa11.43□□□□□ -0.58
SNX5-214ENST00000490175 APOMO95445 188 aa11.43□□□□□ -0.58
SNX5-214ENST00000490175 RNASE13Q5GAN3 156 aaKnown RBP11.43□□□□□ -0.58
SNX5-214ENST00000490175 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.43□□□□□ -0.58
SNX5-214ENST00000490175 KIR2DL5BQ8NHK3 375 aa11.43□□□□□ -0.58
SNX5-214ENST00000490175 TRGV4A0A0C4DH28 118 aa11.42□□□□□ -0.58
SNX5-214ENST00000490175 PSMB2P49721 201 aa11.42□□□□□ -0.58
SNX5-214ENST00000490175 NTM-AS1Q6ZSK4 140 aa11.42□□□□□ -0.58
SNX5-214ENST00000490175 SBSPONQ8IVN8 264 aa11.42□□□□□ -0.58
SNX5-214ENST00000490175 IGHV3-30P01768 117 aa11.42□□□□□ -0.58
SNX5-214ENST00000490175 IGHV3-30-5P0DP03 117 aa11.42□□□□□ -0.58
SNX5-214ENST00000490175 TIRAPP58753 221 aa11.42□□□□□ -0.58
SNX5-214ENST00000490175 MTURNQ8N3F0 131 aa11.42□□□□□ -0.58
SNX5-214ENST00000490175 TRBV20-1A0A075B6N2 111 aa11.41□□□□□ -0.58
SNX5-214ENST00000490175 IGHV1-58A0A0C4DH39 117 aa11.41□□□□□ -0.58
SNX5-214ENST00000490175 IGHV3-30-3P0DP02 117 aa11.41□□□□□ -0.58
SNX5-214ENST00000490175 LINC00612Q8N6U2 182 aa11.41□□□□□ -0.58
SNX5-214ENST00000490175 GEMIN7Q9H840 131 aaKnown RBP11.41□□□□□ -0.58
SNX5-214ENST00000490175 HIVEP1P15822 2718 aa11.41□□□□□ -0.58
SNX5-214ENST00000490175 FHL2Q14192 279 aa11.4□□□□□ -0.58
SNX5-214ENST00000490175 NOTCH3Q9UM47 2321 aa11.4□□□□□ -0.58
SNX5-214ENST00000490175 IGLV5-45A0A087WSX0 123 aa11.4□□□□□ -0.59
SNX5-214ENST00000490175 H7C423 109 aa11.4□□□□□ -0.59
SNX5-214ENST00000490175 FOXI1Q12951 378 aa11.4□□□□□ -0.59
SNX5-214ENST00000490175 FAM19A3Q7Z5A8 133 aa11.4□□□□□ -0.59
SNX5-214ENST00000490175 SPATA3Q8NHX4 192 aa11.4□□□□□ -0.59
SNX5-214ENST00000490175 IGHV3-64A0A075B6Q5 118 aa11.39□□□□□ -0.59
SNX5-214ENST00000490175 LINC00694P0DN24 101 aa11.39□□□□□ -0.59
SNX5-214ENST00000490175 VSIG2Q96IQ7 327 aa11.39□□□□□ -0.59
SNX5-214ENST00000490175 TMEM243Q9BU79 118 aa11.39□□□□□ -0.59
SNX5-214ENST00000490175 CFC1BP0CG36 223 aa11.38□□□□□ -0.59
SNX5-214ENST00000490175 CFC1P0CG37 223 aa11.38□□□□□ -0.59
SNX5-214ENST00000490175 X6R8D5 127 aa11.38□□□□□ -0.59
SNX5-214ENST00000490175 HERVK_113P63121 156 aa11.38□□□□□ -0.59
SNX5-214ENST00000490175 C10orf126Q8N4M7 172 aa11.38□□□□□ -0.59
SNX5-214ENST00000490175 PRO1854Q9UHT4 67 aa11.38□□□□□ -0.59
SNX5-214ENST00000490175 SMCPP49901 116 aaPredicted RBP11.37□□□□□ -0.59
SNX5-214ENST00000490175 WFDC9Q8NEX5 89 aa11.37□□□□□ -0.59
SNX5-214ENST00000490175 UBE2L6O14933 153 aa11.36□□□□□ -0.59
SNX5-214ENST00000490175 APOC4P55056 127 aa11.36□□□□□ -0.59
SNX5-214ENST00000490175 TRAV8-3A0A0A6YYJ7 113 aa11.36□□□□□ -0.59
SNX5-214ENST00000490175 LOC100131303A0A0U1RQF7 123 aa11.36□□□□□ -0.59
SNX5-214ENST00000490175 WIPF1O43516 503 aa11.36□□□□□ -0.59
SNX5-214ENST00000490175 SFTA2Q6UW10 78 aa11.36□□□□□ -0.59
SNX5-214ENST00000490175 TMEM101Q96IK0 257 aa11.36□□□□□ -0.59
SNX5-214ENST00000490175 CDC42SE2Q9NRR3 84 aa11.36□□□□□ -0.59
SNX5-214ENST00000490175 A0A0J9YXY3 114 aa11.35□□□□□ -0.59
SNX5-214ENST00000490175 CDKN2A-AS1Q9UH64 79 aa11.35□□□□□ -0.59
SNX5-214ENST00000490175 TCL1BO95988 128 aa11.35□□□□□ -0.59
SNX5-214ENST00000490175 SPINK8P0C7L1 97 aa11.35□□□□□ -0.59
SNX5-214ENST00000490175 SCGB1C2P0DMR2 95 aa11.35□□□□□ -0.59
SNX5-214ENST00000490175 DEFB130BP0DP73 79 aa11.35□□□□□ -0.59
SNX5-214ENST00000490175 DEFB130AP0DP74 79 aa11.35□□□□□ -0.59
SNX5-214ENST00000490175 LINC00242Q5T6M2 205 aa11.35□□□□□ -0.59
SNX5-214ENST00000490175 LYRM9A8MSI8 78 aa11.34□□□□□ -0.59
SNX5-214ENST00000490175 PPDPFLQ8WWR9 84 aa11.34□□□□□ -0.59
SNX5-214ENST00000490175 NDUFA12Q9UI09 145 aa11.34□□□□□ -0.59
SNX5-214ENST00000490175 ZFAND6Q6FIF0 208 aa11.33□□□□□ -0.6
SNX5-214ENST00000490175 TEN1Q86WV5 123 aa11.33□□□□□ -0.6
SNX5-214ENST00000490175 TRBV6-8A0A0A6YYG3 113 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms