RNA–Protein interactions for RNA: ENST00000490077.5

TNXB-206, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,756 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-206ENST00000490077 GATA3P23771 443 aa9.53□□□□□ -0.88
TNXB-206ENST00000490077 TRGV1A0A0A0MS02 117 aa9.53□□□□□ -0.88
TNXB-206ENST00000490077 Q1RN00 199 aa9.53□□□□□ -0.88
TNXB-206ENST00000490077 DEFB113Q30KQ7 82 aa9.53□□□□□ -0.88
TNXB-206ENST00000490077 C1QTNF4Q9BXJ3 329 aa9.53□□□□□ -0.88
TNXB-206ENST00000490077 IGKV3OR2-268A0A0C4DH90 116 aa9.52□□□□□ -0.88
TNXB-206ENST00000490077 TEX49A0A1B0GTD5 131 aa9.52□□□□□ -0.88
TNXB-206ENST00000490077 TRIAP1O43715 76 aa9.52□□□□□ -0.88
TNXB-206ENST00000490077 NTM-AS1Q6ZSK4 140 aa9.52□□□□□ -0.88
TNXB-206ENST00000490077 SVIPQ8NHG7 77 aa9.52□□□□□ -0.88
TNXB-206ENST00000490077 TIMM21Q9BVV7 248 aa9.52□□□□□ -0.88
TNXB-206ENST00000490077 ANK2Q01484 3957 aa9.52□□□□□ -0.89
TNXB-206ENST00000490077 TRAV13-1A0A0B4J241 112 aa9.52□□□□□ -0.89
TNXB-206ENST00000490077 NDUFA12Q9UI09 145 aa9.52□□□□□ -0.89
TNXB-206ENST00000490077 SPATA3Q8NHX4 192 aa9.52□□□□□ -0.89
TNXB-206ENST00000490077 DYNLRB2Q8TF09 96 aa9.52□□□□□ -0.89
TNXB-206ENST00000490077 M0R2P5 195 aa9.51□□□□□ -0.89
TNXB-206ENST00000490077 SPATA25Q9BR10 227 aa9.51□□□□□ -0.89
TNXB-206ENST00000490077 RPL35AP18077 110 aaKnown RBP9.51□□□□□ -0.89
TNXB-206ENST00000490077 RHOHQ15669 191 aa9.51□□□□□ -0.89
TNXB-206ENST00000490077 SMR3AQ99954 134 aa9.51□□□□□ -0.89
TNXB-206ENST00000490077 TRGV11A0A075B6L2 103 aa9.5□□□□□ -0.89
TNXB-206ENST00000490077 TMEM238LA0A1B0GVL6 79 aa9.5□□□□□ -0.89
TNXB-206ENST00000490077 A6NJY4 79 aa9.5□□□□□ -0.89
TNXB-206ENST00000490077 ODF3Q96PU9 254 aa9.5□□□□□ -0.89
TNXB-206ENST00000490077 CITED2Q99967 270 aaPredicted RBP9.5□□□□□ -0.89
TNXB-206ENST00000490077 FLNBO75369 2602 aaKnown RBP9.5□□□□□ -0.89
TNXB-206ENST00000490077 GAGE12JA6NER3 117 aa9.5□□□□□ -0.89
TNXB-206ENST00000490077 CRLF1O75462 422 aa9.5□□□□□ -0.89
TNXB-206ENST00000490077 MRPS36P82909 103 aaKnown RBP9.5□□□□□ -0.89
TNXB-206ENST00000490077 GAGE4Q13068 117 aa9.5□□□□□ -0.89
TNXB-206ENST00000490077 GAGE5Q13069 117 aa9.5□□□□□ -0.89
TNXB-206ENST00000490077 Q8N2B8 174 aa9.49□□□□□ -0.89
TNXB-206ENST00000490077 NSD1Q96L73 2696 aaPredicted RBP9.49□□□□□ -0.89
TNXB-206ENST00000490077 GIG44P09565 113 aaPredicted RBP9.49□□□□□ -0.89
TNXB-206ENST00000490077 NTN5Q8WTR8 489 aaPredicted RBP9.49□□□□□ -0.89
TNXB-206ENST00000490077 VSIG2Q96IQ7 327 aa9.49□□□□□ -0.89
TNXB-206ENST00000490077 NOP10Q9NPE3 64 aaKnown RBP9.49□□□□□ -0.89
TNXB-206ENST00000490077 J3QLI3 93 aa9.48□□□□□ -0.89
TNXB-206ENST00000490077 SLC25A20O43772 301 aa9.48□□□□□ -0.89
TNXB-206ENST00000490077 TMEM101Q96IK0 257 aa9.48□□□□□ -0.89
TNXB-206ENST00000490077 ERG28Q9UKR5 140 aa9.48□□□□□ -0.89
TNXB-206ENST00000490077 SOSTDC1Q6X4U4 206 aa9.48□□□□□ -0.89
TNXB-206ENST00000490077 PAPPA-AS1Q5QFB9 102 aa9.47□□□□□ -0.89
TNXB-206ENST00000490077 DNAJC9-AS1A6NH13 148 aa9.47□□□□□ -0.89
TNXB-206ENST00000490077 LRRC75A-AS1Q8N1F1 130 aa9.47□□□□□ -0.89
TNXB-206ENST00000490077 IGHV1-58A0A0C4DH39 117 aa9.46□□□□□ -0.89
TNXB-206ENST00000490077 TEN1Q86WV5 123 aa9.46□□□□□ -0.89
TNXB-206ENST00000490077 RNF152Q8N8N0 203 aa9.46□□□□□ -0.89
TNXB-206ENST00000490077 A8MWV9 139 aa9.45□□□□□ -0.9
TNXB-206ENST00000490077 CIDEAO60543 219 aa9.45□□□□□ -0.9
TNXB-206ENST00000490077 LINC00242Q5T6M2 205 aa9.45□□□□□ -0.9
TNXB-206ENST00000490077 J3QKU1 62 aa9.45□□□□□ -0.9
TNXB-206ENST00000490077 GAGE7O76087 117 aa9.45□□□□□ -0.9
TNXB-206ENST00000490077 GAGE12FP0CL80 117 aa9.45□□□□□ -0.9
TNXB-206ENST00000490077 GAGE12GP0CL81 117 aa9.45□□□□□ -0.9
TNXB-206ENST00000490077 GAGE12IP0CL82 117 aa9.45□□□□□ -0.9
TNXB-206ENST00000490077 PIK3CD-AS1Q5SR53 167 aa9.45□□□□□ -0.9
TNXB-206ENST00000490077 Q9H8V8 135 aa9.45□□□□□ -0.9
TNXB-206ENST00000490077 MAST4O15021 2626 aa9.44□□□□□ -0.9
TNXB-206ENST00000490077 ZNF415Q09FC8 603 aa9.44□□□□□ -0.9
TNXB-206ENST00000490077 GEMIN7Q9H840 131 aaKnown RBP9.44□□□□□ -0.9
TNXB-206ENST00000490077 NOTCH1P46531 2555 aa9.44□□□□□ -0.9
TNXB-206ENST00000490077 TENM3Q9P273 2699 aa9.44□□□□□ -0.9
TNXB-206ENST00000490077 C4orf3Q8WVX3 66 aa9.44□□□□□ -0.9
TNXB-206ENST00000490077 STAB1Q9NY15 2570 aa9.43□□□□□ -0.9
TNXB-206ENST00000490077 A0A096LPF7 62 aa9.43□□□□□ -0.9
TNXB-206ENST00000490077 CCL24O00175 119 aa9.43□□□□□ -0.9
TNXB-206ENST00000490077 STHQ8IWL8 128 aa9.43□□□□□ -0.9
TNXB-206ENST00000490077 LINC01620Q4KN68 170 aa9.42□□□□□ -0.9
TNXB-206ENST00000490077 DGAT2L7PQ6IED9 249 aa9.42□□□□□ -0.9
TNXB-206ENST00000490077 CLUHP3Q96NS8 147 aa9.42□□□□□ -0.9
TNXB-206ENST00000490077 PYGO1Q9Y3Y4 419 aa9.42□□□□□ -0.9
TNXB-206ENST00000490077 TRAV4A0A0B4J268 109 aa9.42□□□□□ -0.9
TNXB-206ENST00000490077 INSP01308 110 aa9.42□□□□□ -0.9
TNXB-206ENST00000490077 SBSPONQ8IVN8 264 aa9.42□□□□□ -0.9
TNXB-206ENST00000490077 PPDPFLQ8WWR9 84 aa9.42□□□□□ -0.9
TNXB-206ENST00000490077 A8MTW9 85 aa9.41□□□□□ -0.9
TNXB-206ENST00000490077 H7C423 109 aa9.41□□□□□ -0.9
TNXB-206ENST00000490077 RS1O15537 224 aa9.41□□□□□ -0.9
TNXB-206ENST00000490077 RPL13AP40429 203 aaKnown RBP9.41□□□□□ -0.9
TNXB-206ENST00000490077 Q8N3U1 123 aa9.41□□□□□ -0.9
TNXB-206ENST00000490077 PLAC8L1A1L4L8 177 aa9.41□□□□□ -0.9
TNXB-206ENST00000490077 C11orf68Q9H3H3 251 aaKnown RBP9.41□□□□□ -0.9
TNXB-206ENST00000490077 ICOSQ9Y6W8 199 aa9.41□□□□□ -0.9
TNXB-206ENST00000490077 TINCRA0A1B0GVN0 87 aa9.41□□□□□ -0.9
TNXB-206ENST00000490077 DEFB4AO15263 64 aa9.41□□□□□ -0.9
TNXB-206ENST00000490077 CKS1BP61024 79 aa9.41□□□□□ -0.9
TNXB-206ENST00000490077 IGLV4-60A0A075B6I1 120 aa9.4□□□□□ -0.9
TNXB-206ENST00000490077 A0A1B0GV72 72 aa9.4□□□□□ -0.9
TNXB-206ENST00000490077 J3QR89 54 aa9.4□□□□□ -0.9
TNXB-206ENST00000490077 BEAN1Q3B7T3 259 aa9.4□□□□□ -0.9
TNXB-206ENST00000490077 MIAQ16674 131 aa9.4□□□□□ -0.91
TNXB-206ENST00000490077 TRAV26-1A0A087WT03 109 aa9.39□□□□□ -0.91
TNXB-206ENST00000490077 A0A0B4J2C4 111 aa9.39□□□□□ -0.91
TNXB-206ENST00000490077 GAGE6Q13070 117 aa9.39□□□□□ -0.91
TNXB-206ENST00000490077 PEMTQ9UBM1 199 aa9.39□□□□□ -0.91
TNXB-206ENST00000490077 TRBV20-1A0A075B6N2 111 aa9.39□□□□□ -0.91
TNXB-206ENST00000490077 SMIM1B2RUZ4 78 aa9.39□□□□□ -0.91
TNXB-206ENST00000490077 CRYBA4P53673 196 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms