RNA–Protein interactions for RNA: ENST00000489858.1

RAB3GAP1-205, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2

Gene RAB3GAP1, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-205ENST00000489858 RPL35AP18077 110 aaKnown RBP6.86□□□□□ -1.31
RAB3GAP1-205ENST00000489858 DGAT2L7PQ6IED9 249 aa6.86□□□□□ -1.31
RAB3GAP1-205ENST00000489858 CEMP1Q6PRD7 247 aaPredicted RBP6.86□□□□□ -1.31
RAB3GAP1-205ENST00000489858 Q6ZTI0 123 aa6.86□□□□□ -1.31
RAB3GAP1-205ENST00000489858 GEMIN7Q9H840 131 aaKnown RBP6.86□□□□□ -1.31
RAB3GAP1-205ENST00000489858 AKAP9Q99996 3911 aa6.86□□□□□ -1.31
RAB3GAP1-205ENST00000489858 MYO9AB2RTY4 2548 aa6.86□□□□□ -1.31
RAB3GAP1-205ENST00000489858 IGHV1-58A0A0C4DH39 117 aa6.85□□□□□ -1.31
RAB3GAP1-205ENST00000489858 APOMO95445 188 aa6.85□□□□□ -1.31
RAB3GAP1-205ENST00000489858 PF4P02776 101 aa6.85□□□□□ -1.31
RAB3GAP1-205ENST00000489858 IGHV3-30-3P0DP02 117 aa6.85□□□□□ -1.31
RAB3GAP1-205ENST00000489858 DAZ4Q86SG3 579 aaKnown RBP6.85□□□□□ -1.31
RAB3GAP1-205ENST00000489858 FAM104AQ969W3 186 aa6.85□□□□□ -1.31
RAB3GAP1-205ENST00000489858 DAZ3Q9NR90 486 aaKnown RBP6.85□□□□□ -1.31
RAB3GAP1-205ENST00000489858 Q9UF83 564 aa6.85□□□□□ -1.31
RAB3GAP1-205ENST00000489858 PDZD2O15018 2839 aa6.84□□□□□ -1.31
RAB3GAP1-205ENST00000489858 A0A0J9YXY3 114 aa6.84□□□□□ -1.31
RAB3GAP1-205ENST00000489858 TSPAN13O95857 204 aa6.84□□□□□ -1.31
RAB3GAP1-205ENST00000489858 GIG44P09565 113 aaPredicted RBP6.84□□□□□ -1.31
RAB3GAP1-205ENST00000489858 UBE2D3P61077 147 aa6.84□□□□□ -1.31
RAB3GAP1-205ENST00000489858 UBE2D2P62837 147 aa6.84□□□□□ -1.31
RAB3GAP1-205ENST00000489858 RPL24P83731 157 aaKnown RBP6.84□□□□□ -1.31
RAB3GAP1-205ENST00000489858 RNASE13Q5GAN3 156 aaKnown RBP6.84□□□□□ -1.31
RAB3GAP1-205ENST00000489858 VSIG2Q96IQ7 327 aa6.84□□□□□ -1.31
RAB3GAP1-205ENST00000489858 VPS25Q9BRG1 176 aa6.84□□□□□ -1.31
RAB3GAP1-205ENST00000489858 WFDC10AQ9H1F0 79 aa6.84□□□□□ -1.31
RAB3GAP1-205ENST00000489858 NOP10Q9NPE3 64 aaKnown RBP6.84□□□□□ -1.31
RAB3GAP1-205ENST00000489858 CSMD2Q7Z408 3487 aa6.84□□□□□ -1.32
RAB3GAP1-205ENST00000489858 KMT2BQ9UMN6 2715 aaPredicted RBP6.83□□□□□ -1.32
RAB3GAP1-205ENST00000489858 TRGV2A0A075B6R0 118 aa6.83□□□□□ -1.32
RAB3GAP1-205ENST00000489858 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.83□□□□□ -1.32
RAB3GAP1-205ENST00000489858 GAGE12JA6NER3 117 aa6.83□□□□□ -1.32
RAB3GAP1-205ENST00000489858 F8W1H4 67 aa6.83□□□□□ -1.32
RAB3GAP1-205ENST00000489858 TIRAPP58753 221 aa6.83□□□□□ -1.32
RAB3GAP1-205ENST00000489858 GAGE4Q13068 117 aa6.83□□□□□ -1.32
RAB3GAP1-205ENST00000489858 GAGE5Q13069 117 aa6.83□□□□□ -1.32
RAB3GAP1-205ENST00000489858 GAGE13Q4V321 117 aa6.83□□□□□ -1.32
RAB3GAP1-205ENST00000489858 C10orf126Q8N4M7 172 aa6.83□□□□□ -1.32
RAB3GAP1-205ENST00000489858 OVOL2Q9BRP0 275 aa6.83□□□□□ -1.32
RAB3GAP1-205ENST00000489858 SORL1Q92673 2214 aa6.82□□□□□ -1.32
RAB3GAP1-205ENST00000489858 IGLV5-45A0A087WSX0 123 aa6.82□□□□□ -1.32
RAB3GAP1-205ENST00000489858 A0A0B4J2C4 111 aa6.82□□□□□ -1.32
RAB3GAP1-205ENST00000489858 GAGE7O76087 117 aa6.82□□□□□ -1.32
RAB3GAP1-205ENST00000489858 LY6G6DO95868 133 aa6.82□□□□□ -1.32
RAB3GAP1-205ENST00000489858 SPINK8P0C7L1 97 aa6.82□□□□□ -1.32
RAB3GAP1-205ENST00000489858 GAGE12FP0CL80 117 aa6.82□□□□□ -1.32
RAB3GAP1-205ENST00000489858 GAGE12GP0CL81 117 aa6.82□□□□□ -1.32
RAB3GAP1-205ENST00000489858 GAGE12IP0CL82 117 aa6.82□□□□□ -1.32
RAB3GAP1-205ENST00000489858 HERVK_113P63121 156 aa6.82□□□□□ -1.32
RAB3GAP1-205ENST00000489858 LINC00482Q8N8I6 264 aa6.82□□□□□ -1.32
RAB3GAP1-205ENST00000489858 TMEM243Q9BU79 118 aa6.82□□□□□ -1.32
RAB3GAP1-205ENST00000489858 SPANXDQ9BXN6 97 aa6.82□□□□□ -1.32
RAB3GAP1-205ENST00000489858 SPANXCQ9NY87 97 aa6.82□□□□□ -1.32
RAB3GAP1-205ENST00000489858 PRO1854Q9UHT4 67 aa6.82□□□□□ -1.32
RAB3GAP1-205ENST00000489858 NDUFA12Q9UI09 145 aa6.82□□□□□ -1.32
RAB3GAP1-205ENST00000489858 TRAV8-3A0A0A6YYJ7 113 aa6.81□□□□□ -1.32
RAB3GAP1-205ENST00000489858 LOC107984156A0A0G2JMH3 177 aa6.81□□□□□ -1.32
RAB3GAP1-205ENST00000489858 TRBV6-4A0A1B0GX49 114 aa6.81□□□□□ -1.32
RAB3GAP1-205ENST00000489858 PLAC8L1A1L4L8 177 aa6.81□□□□□ -1.32
RAB3GAP1-205ENST00000489858 A4D1N5 150 aa6.81□□□□□ -1.32
RAB3GAP1-205ENST00000489858 UBE2L6O14933 153 aa6.81□□□□□ -1.32
RAB3GAP1-205ENST00000489858 TIMM17BO60830 172 aa6.81□□□□□ -1.32
RAB3GAP1-205ENST00000489858 CFC1BP0CG36 223 aa6.81□□□□□ -1.32
RAB3GAP1-205ENST00000489858 CFC1P0CG37 223 aa6.81□□□□□ -1.32
RAB3GAP1-205ENST00000489858 ZFAND6Q6FIF0 208 aa6.81□□□□□ -1.32
RAB3GAP1-205ENST00000489858 FAM19A3Q7Z5A8 133 aa6.81□□□□□ -1.32
RAB3GAP1-205ENST00000489858 SBSPONQ8IVN8 264 aa6.81□□□□□ -1.32
RAB3GAP1-205ENST00000489858 ARL17AQ8IVW1 177 aa6.81□□□□□ -1.32
RAB3GAP1-205ENST00000489858 CSNK1G2-AS1Q8NCQ2 148 aa6.81□□□□□ -1.32
RAB3GAP1-205ENST00000489858 TMEM101Q96IK0 257 aa6.81□□□□□ -1.32
RAB3GAP1-205ENST00000489858 GTSF1LQ9H1H1 148 aa6.81□□□□□ -1.32
RAB3GAP1-205ENST00000489858 CSDC2Q9Y534 153 aaKnown RBP6.81□□□□□ -1.32
RAB3GAP1-205ENST00000489858 TLN2Q9Y4G6 2542 aa6.81□□□□□ -1.32
RAB3GAP1-205ENST00000489858 TRGV4A0A0C4DH28 118 aa6.8□□□□□ -1.32
RAB3GAP1-205ENST00000489858 G3V4G9 280 aa6.8□□□□□ -1.32
RAB3GAP1-205ENST00000489858 H3BMG7 143 aa6.8□□□□□ -1.32
RAB3GAP1-205ENST00000489858 H7C423 109 aa6.8□□□□□ -1.32
RAB3GAP1-205ENST00000489858 J3QR89 54 aa6.8□□□□□ -1.32
RAB3GAP1-205ENST00000489858 NDUFA1O15239 70 aa6.8□□□□□ -1.32
RAB3GAP1-205ENST00000489858 KRTAP10-3P60369 221 aa6.8□□□□□ -1.32
RAB3GAP1-205ENST00000489858 MUSTN1Q8IVN3 82 aa6.8□□□□□ -1.32
RAB3GAP1-205ENST00000489858 SMR3AQ99954 134 aa6.8□□□□□ -1.32
RAB3GAP1-205ENST00000489858 SONP18583 2426 aaKnown RBP6.8□□□□□ -1.32
RAB3GAP1-205ENST00000489858 TRBV20-1A0A075B6N2 111 aa6.79□□□□□ -1.32
RAB3GAP1-205ENST00000489858 PSMB2P49721 201 aa6.79□□□□□ -1.32
RAB3GAP1-205ENST00000489858 INSL3P51460 131 aa6.79□□□□□ -1.32
RAB3GAP1-205ENST00000489858 MIAQ16674 131 aa6.79□□□□□ -1.32
RAB3GAP1-205ENST00000489858 NTM-AS1Q6ZSK4 140 aa6.79□□□□□ -1.32
RAB3GAP1-205ENST00000489858 LITAFQ99732 161 aa6.79□□□□□ -1.32
RAB3GAP1-205ENST00000489858 CDKN2A-AS1Q9UH64 79 aa6.79□□□□□ -1.32
RAB3GAP1-205ENST00000489858 PRO0461Q9UI25 63 aa6.79□□□□□ -1.32
RAB3GAP1-205ENST00000489858 ERG28Q9UKR5 140 aa6.79□□□□□ -1.32
RAB3GAP1-205ENST00000489858 CHD6Q8TD26 2715 aa6.79□□□□□ -1.32
RAB3GAP1-205ENST00000489858 CCDC168Q8NDH2 2452 aa6.78□□□□□ -1.32
RAB3GAP1-205ENST00000489858 IGLV5-39A0A0G2JS06 123 aa6.78□□□□□ -1.32
RAB3GAP1-205ENST00000489858 TEX48A0A1B0GUV7 120 aa6.78□□□□□ -1.32
RAB3GAP1-205ENST00000489858 IGHV3-33P01772 117 aa6.78□□□□□ -1.32
RAB3GAP1-205ENST00000489858 LINC00694P0DN24 101 aa6.78□□□□□ -1.32
RAB3GAP1-205ENST00000489858 WFDC2Q14508 124 aa6.78□□□□□ -1.32
RAB3GAP1-205ENST00000489858 C9orf66Q5T8R8 295 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms