RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 C15orf54Q8N8G6 183 aa4.16□□□□□ -1.74
RTFDC1-209ENST00000487211 NUP35Q8NFH5 326 aa4.16□□□□□ -1.74
RTFDC1-209ENST00000487211 MRPS16Q9Y3D3 137 aaKnown RBP4.16□□□□□ -1.74
RTFDC1-209ENST00000487211 TRAV9-2A0A087WT02 112 aa4.15□□□□□ -1.75
RTFDC1-209ENST00000487211 M0QY20 66 aa4.15□□□□□ -1.75
RTFDC1-209ENST00000487211 ZNF56Q15929 161 aa4.15□□□□□ -1.75
RTFDC1-209ENST00000487211 Q6ZR54 194 aa4.15□□□□□ -1.75
RTFDC1-209ENST00000487211 ATP6V0E2Q8NHE4 81 aa4.15□□□□□ -1.75
RTFDC1-209ENST00000487211 UPK3BQ9BT76 320 aa4.15□□□□□ -1.75
RTFDC1-209ENST00000487211 DPH3P1Q9H4G8 78 aa4.15□□□□□ -1.75
RTFDC1-209ENST00000487211 TRBV7-3A0A075B6L6 115 aa4.14□□□□□ -1.75
RTFDC1-209ENST00000487211 TRBV10-1A0A0K0K1A3 114 aa4.14□□□□□ -1.75
RTFDC1-209ENST00000487211 A0A1B0GUT8 65 aa4.14□□□□□ -1.75
RTFDC1-209ENST00000487211 F8W036 122 aa4.14□□□□□ -1.75
RTFDC1-209ENST00000487211 TRGC1P0CF51 173 aa4.14□□□□□ -1.75
RTFDC1-209ENST00000487211 SMIM17P0DL12 118 aa4.14□□□□□ -1.75
RTFDC1-209ENST00000487211 UBE2D3P61077 147 aa4.14□□□□□ -1.75
RTFDC1-209ENST00000487211 UBE2D2P62837 147 aa4.14□□□□□ -1.75
RTFDC1-209ENST00000487211 C10orf91Q5T1B1 145 aa4.14□□□□□ -1.75
RTFDC1-209ENST00000487211 SH2D6Q7Z4S9 175 aa4.14□□□□□ -1.75
RTFDC1-209ENST00000487211 WFDC10BQ8IUB3 73 aa4.14□□□□□ -1.75
RTFDC1-209ENST00000487211 GATD1Q8NB37 220 aa4.14□□□□□ -1.75
RTFDC1-209ENST00000487211 RNF185Q96GF1 192 aa4.14□□□□□ -1.75
RTFDC1-209ENST00000487211 AP1S3Q96PC3 154 aa4.14□□□□□ -1.75
RTFDC1-209ENST00000487211 SEC11CQ9BY50 192 aa4.14□□□□□ -1.75
RTFDC1-209ENST00000487211 GTSF1LQ9H1H1 148 aa4.14□□□□□ -1.75
RTFDC1-209ENST00000487211 NAT8BQ9UHF3 227 aa4.14□□□□□ -1.75
RTFDC1-209ENST00000487211 TRAV26-2A0A0B4J265 109 aa4.13□□□□□ -1.75
RTFDC1-209ENST00000487211 NBDYA0A0U1RRE5 68 aa4.13□□□□□ -1.75
RTFDC1-209ENST00000487211 MGPP08493 103 aa4.13□□□□□ -1.75
RTFDC1-209ENST00000487211 RAB4AP20338 218 aa4.13□□□□□ -1.75
RTFDC1-209ENST00000487211 LELP1Q5T871 98 aa4.13□□□□□ -1.75
RTFDC1-209ENST00000487211 NTM-AS1Q6ZSK4 140 aa4.13□□□□□ -1.75
RTFDC1-209ENST00000487211 DEFB104AQ8WTQ1 72 aa4.13□□□□□ -1.75
RTFDC1-209ENST00000487211 TMEM191AQ9H0A3 160 aa4.13□□□□□ -1.75
RTFDC1-209ENST00000487211 A0A1B0GXF2 115 aa4.12□□□□□ -1.75
RTFDC1-209ENST00000487211 PPP1R2P9O14990 202 aa4.12□□□□□ -1.75
RTFDC1-209ENST00000487211 RTL8CO15255 209 aa4.12□□□□□ -1.75
RTFDC1-209ENST00000487211 SIVA1O15304 175 aa4.12□□□□□ -1.75
RTFDC1-209ENST00000487211 MT-ND4LP03901 98 aa4.12□□□□□ -1.75
RTFDC1-209ENST00000487211 RASL11AQ6T310 242 aa4.12□□□□□ -1.75
RTFDC1-209ENST00000487211 AMN1Q8IY45 258 aa4.12□□□□□ -1.75
RTFDC1-209ENST00000487211 SLC7A5P1Q8MH63 180 aa4.12□□□□□ -1.75
RTFDC1-209ENST00000487211 BORCS7Q96B45 105 aa4.12□□□□□ -1.75
RTFDC1-209ENST00000487211 NIT2Q9NQR4 276 aa4.12□□□□□ -1.75
RTFDC1-209ENST00000487211 FSIP2Q5CZC0 6907 aa4.11□□□□□ -1.75
RTFDC1-209ENST00000487211 DNAH10OSP0CZ25 163 aa4.11□□□□□ -1.75
RTFDC1-209ENST00000487211 OR10J3Q5JRS4 329 aa4.11□□□□□ -1.75
RTFDC1-209ENST00000487211 FAM104BQ5XKR9 115 aa4.11□□□□□ -1.75
RTFDC1-209ENST00000487211 MRPL54Q6P161 138 aaKnown RBP4.11□□□□□ -1.75
RTFDC1-209ENST00000487211 SMIM15Q7Z3B0 74 aa4.11□□□□□ -1.75
RTFDC1-209ENST00000487211 RPL39LQ96EH5 51 aaKnown RBP4.11□□□□□ -1.75
RTFDC1-209ENST00000487211 DNAJC30Q96LL9 226 aa4.11□□□□□ -1.75
RTFDC1-209ENST00000487211 CARHSP1Q9Y2V2 147 aaKnown RBP4.11□□□□□ -1.75
RTFDC1-209ENST00000487211 APOBP04114 4563 aaKnown RBP4.1□□□□□ -1.75
RTFDC1-209ENST00000487211 PKD1P98161 4303 aa4.1□□□□□ -1.75
RTFDC1-209ENST00000487211 A0A087WWC5 75 aa4.1□□□□□ -1.75
RTFDC1-209ENST00000487211 TRBV6-8A0A0A6YYG3 113 aa4.1□□□□□ -1.75
RTFDC1-209ENST00000487211 TRAV8-6A0A0B4J262 113 aa4.1□□□□□ -1.75
RTFDC1-209ENST00000487211 C7orf77A4D0Y5 90 aa4.1□□□□□ -1.75
RTFDC1-209ENST00000487211 SMKR1H3BMG3 65 aa4.1□□□□□ -1.75
RTFDC1-209ENST00000487211 H7C1H1 209 aa4.1□□□□□ -1.75
RTFDC1-209ENST00000487211 IGHV3-30P01768 117 aa4.1□□□□□ -1.75
RTFDC1-209ENST00000487211 IGHV3-33P01772 117 aa4.1□□□□□ -1.75
RTFDC1-209ENST00000487211 IGHV3-30-3P0DP02 117 aa4.1□□□□□ -1.75
RTFDC1-209ENST00000487211 IGHV3-30-5P0DP03 117 aa4.1□□□□□ -1.75
RTFDC1-209ENST00000487211 RPS10P46783 165 aaKnown RBP4.1□□□□□ -1.75
RTFDC1-209ENST00000487211 MRPL51Q4U2R6 128 aaKnown RBP4.1□□□□□ -1.75
RTFDC1-209ENST00000487211 LINC01556Q5JQF7 62 aa4.1□□□□□ -1.75
RTFDC1-209ENST00000487211 LCE1FQ5T754 118 aa4.1□□□□□ -1.75
RTFDC1-209ENST00000487211 C1orf134Q5TEV5 83 aa4.1□□□□□ -1.75
RTFDC1-209ENST00000487211 DAZ4Q86SG3 579 aaKnown RBP4.1□□□□□ -1.75
RTFDC1-209ENST00000487211 NIT1Q86X76 327 aa4.1□□□□□ -1.75
RTFDC1-209ENST00000487211 DAZ3Q9NR90 486 aaKnown RBP4.1□□□□□ -1.75
RTFDC1-209ENST00000487211 TRBV6-5A0A0K0K1A5 114 aa4.09□□□□□ -1.75
RTFDC1-209ENST00000487211 A0A1B0GW15 77 aa4.09□□□□□ -1.75
RTFDC1-209ENST00000487211 NCR2O95944 276 aa4.09□□□□□ -1.75
RTFDC1-209ENST00000487211 APOC3P02656 99 aa4.09□□□□□ -1.75
RTFDC1-209ENST00000487211 POLR2KP53803 58 aaKnown RBP4.09□□□□□ -1.75
RTFDC1-209ENST00000487211 DSCR10P59022 87 aa4.09□□□□□ -1.75
RTFDC1-209ENST00000487211 HBBP68871 147 aa4.09□□□□□ -1.75
RTFDC1-209ENST00000487211 C6orf223Q8N319 242 aa4.09□□□□□ -1.75
RTFDC1-209ENST00000487211 TYMSOSQ8TAI1 123 aa4.09□□□□□ -1.75
RTFDC1-209ENST00000487211 FRZBQ92765 325 aa4.09□□□□□ -1.75
RTFDC1-209ENST00000487211 IMMP2LQ96T52 175 aa4.09□□□□□ -1.75
RTFDC1-209ENST00000487211 RPS10P5Q9NQ39 176 aa4.09□□□□□ -1.75
RTFDC1-209ENST00000487211 TMEM242Q9NWH2 141 aa4.09□□□□□ -1.75
RTFDC1-209ENST00000487211 SDHAF1A6NFY7 115 aa4.08□□□□□ -1.76
RTFDC1-209ENST00000487211 IBA57-AS1B1ANH7 110 aa4.08□□□□□ -1.76
RTFDC1-209ENST00000487211 TMEM262E9PQX1 116 aa4.08□□□□□ -1.76
RTFDC1-209ENST00000487211 IQCJQ1A5X6 159 aa4.08□□□□□ -1.76
RTFDC1-209ENST00000487211 TTC32Q5I0X7 151 aa4.08□□□□□ -1.76
RTFDC1-209ENST00000487211 Q6ZRN7 208 aaPredicted RBP4.08□□□□□ -1.76
RTFDC1-209ENST00000487211 ATP5L2Q7Z4Y8 100 aa4.08□□□□□ -1.76
RTFDC1-209ENST00000487211 MRAP2Q96G30 205 aa4.08□□□□□ -1.76
RTFDC1-209ENST00000487211 BTF3L4Q96K17 158 aa4.08□□□□□ -1.76
RTFDC1-209ENST00000487211 TMEM70Q9BUB7 260 aa4.08□□□□□ -1.76
RTFDC1-209ENST00000487211 URGCP-MRPS24S4R325 110 aa4.08□□□□□ -1.76
RTFDC1-209ENST00000487211 TRBV24-1A0A075B6N3 115 aa4.07□□□□□ -1.76
RTFDC1-209ENST00000487211 TRBV25-1A0A075B6N4 114 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms