RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 KIR2DL5BQ8NHK3 375 aa14.46□□□□□ -0.09
HPS3-206ENST00000486530 TINCRA0A1B0GVN0 87 aa14.46□□□□□ -0.1
HPS3-206ENST00000486530 PLEKHB2Q96CS7 222 aa14.46□□□□□ -0.1
HPS3-206ENST00000486530 CCL25O15444 150 aa14.45□□□□□ -0.1
HPS3-206ENST00000486530 DGAT2L7PQ6IED9 249 aa14.45□□□□□ -0.1
HPS3-206ENST00000486530 GTSF1LQ9H1H1 148 aa14.45□□□□□ -0.1
HPS3-206ENST00000486530 SMAGPQ0VAQ4 97 aa14.44□□□□□ -0.1
HPS3-206ENST00000486530 LINC00612Q8N6U2 182 aa14.44□□□□□ -0.1
HPS3-206ENST00000486530 NHP2Q9NX24 153 aaKnown RBP14.44□□□□□ -0.1
HPS3-206ENST00000486530 X6R8D5 127 aa14.44□□□□□ -0.1
HPS3-206ENST00000486530 AMMECR1LQ6DCA0 310 aa14.44□□□□□ -0.1
HPS3-206ENST00000486530 NTM-AS1Q6ZSK4 140 aa14.44□□□□□ -0.1
HPS3-206ENST00000486530 RAB37Q96AX2 223 aa14.44□□□□□ -0.1
HPS3-206ENST00000486530 A0A0J9YY99 117 aa14.43□□□□□ -0.1
HPS3-206ENST00000486530 FHL2Q14192 279 aa14.43□□□□□ -0.1
HPS3-206ENST00000486530 CSDC2Q9Y534 153 aaKnown RBP14.43□□□□□ -0.1
HPS3-206ENST00000486530 H3BUT2 72 aa14.42□□□□□ -0.1
HPS3-206ENST00000486530 APOC4P55056 127 aa14.42□□□□□ -0.1
HPS3-206ENST00000486530 SBSPONQ8IVN8 264 aa14.42□□□□□ -0.1
HPS3-206ENST00000486530 WIPF1O43516 503 aa14.42□□□□□ -0.1
HPS3-206ENST00000486530 UBE2D1P51668 147 aa14.42□□□□□ -0.1
HPS3-206ENST00000486530 SPANXB1Q9NS25 103 aaPredicted RBP14.41□□□□□ -0.1
HPS3-206ENST00000486530 LINC00694P0DN24 101 aa14.4□□□□□ -0.1
HPS3-206ENST00000486530 SRSF9Q13242 221 aaKnown RBP eCLIP14.4□□□□□ -0.1
HPS3-206ENST00000486530 LOC100131303A0A0U1RQF7 123 aa14.4□□□□□ -0.1
HPS3-206ENST00000486530 K7ERJ3 54 aa14.4□□□□□ -0.1
HPS3-206ENST00000486530 OR5A1Q8NGJ0 315 aa14.4□□□□□ -0.1
HPS3-206ENST00000486530 TMEM243Q9BU79 118 aa14.4□□□□□ -0.1
HPS3-206ENST00000486530 IGHV3-64A0A075B6Q5 118 aa14.39□□□□□ -0.11
HPS3-206ENST00000486530 DEFB130BP0DP73 79 aa14.39□□□□□ -0.11
HPS3-206ENST00000486530 DEFB130AP0DP74 79 aa14.39□□□□□ -0.11
HPS3-206ENST00000486530 C3orf56Q8N813 242 aa14.39□□□□□ -0.11
HPS3-206ENST00000486530 GEMIN7Q9H840 131 aaKnown RBP14.39□□□□□ -0.11
HPS3-206ENST00000486530 FBN1P35555 2871 aaKnown RBP14.39□□□□□ -0.11
HPS3-206ENST00000486530 TRRAPQ9Y4A5 3859 aa14.39□□□□□ -0.11
HPS3-206ENST00000486530 TMEM238LA0A1B0GVL6 79 aa14.38□□□□□ -0.11
HPS3-206ENST00000486530 A6NJY4 79 aa14.38□□□□□ -0.11
HPS3-206ENST00000486530 IGHV3-30-3P0DP02 117 aa14.38□□□□□ -0.11
HPS3-206ENST00000486530 TIRAPP58753 221 aa14.38□□□□□ -0.11
HPS3-206ENST00000486530 C12orf74Q32Q52 190 aa14.38□□□□□ -0.11
HPS3-206ENST00000486530 IGHV1-58A0A0C4DH39 117 aa14.38□□□□□ -0.11
HPS3-206ENST00000486530 A0A1B0GWB2 263 aa14.38□□□□□ -0.11
HPS3-206ENST00000486530 H7C423 109 aa14.38□□□□□ -0.11
HPS3-206ENST00000486530 UBE2L6O14933 153 aa14.38□□□□□ -0.11
HPS3-206ENST00000486530 A0A1W2PPM0 123 aa14.37□□□□□ -0.11
HPS3-206ENST00000486530 NAA38Q9BRA0 125 aaKnown RBP14.37□□□□□ -0.11
HPS3-206ENST00000486530 IGLV5-45A0A087WSX0 123 aa14.36□□□□□ -0.11
HPS3-206ENST00000486530 LYRM9A8MSI8 78 aa14.36□□□□□ -0.11
HPS3-206ENST00000486530 DEFB135Q30KP9 77 aa14.36□□□□□ -0.11
HPS3-206ENST00000486530 SAMD5Q5TGI4 173 aa14.36□□□□□ -0.11
HPS3-206ENST00000486530 GTF2H5Q6ZYL4 71 aa14.36□□□□□ -0.11
HPS3-206ENST00000486530 GAGE10A6NGK3 116 aa14.35□□□□□ -0.11
HPS3-206ENST00000486530 FAM19A3Q7Z5A8 133 aa14.35□□□□□ -0.11
HPS3-206ENST00000486530 VSIG2Q96IQ7 327 aa14.35□□□□□ -0.11
HPS3-206ENST00000486530 HERVK_113P63121 156 aa14.34□□□□□ -0.11
HPS3-206ENST00000486530 TMEM101Q96IK0 257 aa14.34□□□□□ -0.11
HPS3-206ENST00000486530 CDC42SE2Q9NRR3 84 aa14.34□□□□□ -0.11
HPS3-206ENST00000486530 TRAV8-3A0A0A6YYJ7 113 aa14.33□□□□□ -0.11
HPS3-206ENST00000486530 FABP2P12104 132 aa14.33□□□□□ -0.11
HPS3-206ENST00000486530 SHISA2Q6UWI4 295 aa14.33□□□□□ -0.11
HPS3-206ENST00000486530 K7EP34 96 aa14.33□□□□□ -0.12
HPS3-206ENST00000486530 FAM222AQ5U5X8 452 aa14.33□□□□□ -0.12
HPS3-206ENST00000486530 IGHV3-30P01768 117 aa14.32□□□□□ -0.12
HPS3-206ENST00000486530 SPINK8P0C7L1 97 aa14.32□□□□□ -0.12
HPS3-206ENST00000486530 IGHV3-30-5P0DP03 117 aa14.32□□□□□ -0.12
HPS3-206ENST00000486530 CDKN2A-AS1Q9UH64 79 aa14.32□□□□□ -0.12
HPS3-206ENST00000486530 TRBV6-8A0A0A6YYG3 113 aa14.31□□□□□ -0.12
HPS3-206ENST00000486530 LINC00242Q5T6M2 205 aa14.31□□□□□ -0.12
HPS3-206ENST00000486530 C10orf126Q8N4M7 172 aa14.31□□□□□ -0.12
HPS3-206ENST00000486530 IGLL5B9A064 214 aa14.31□□□□□ -0.12
HPS3-206ENST00000486530 TMEM238C9JI98 176 aa14.31□□□□□ -0.12
HPS3-206ENST00000486530 A0A0J9YXY3 114 aa14.3□□□□□ -0.12
HPS3-206ENST00000486530 PRO0255Q9UI72 69 aa14.3□□□□□ -0.12
HPS3-206ENST00000486530 SPCS1Q9Y6A9 102 aa14.3□□□□□ -0.12
HPS3-206ENST00000486530 IGHV4-28A0A0C4DH34 117 aa14.29□□□□□ -0.12
HPS3-206ENST00000486530 NDUFA12Q9UI09 145 aa14.29□□□□□ -0.12
HPS3-206ENST00000486530 IGHV4-30-4P0DP06 118 aa14.29□□□□□ -0.12
HPS3-206ENST00000486530 MIFP14174 115 aa14.29□□□□□ -0.12
HPS3-206ENST00000486530 COX6A2Q02221 97 aa14.29□□□□□ -0.12
HPS3-206ENST00000486530 ZFAND6Q6FIF0 208 aa14.29□□□□□ -0.12
HPS3-206ENST00000486530 TRAV13-1A0A0B4J241 112 aa14.28□□□□□ -0.12
HPS3-206ENST00000486530 GYPEP15421 78 aa14.28□□□□□ -0.12
HPS3-206ENST00000486530 ATP6V0E2Q8NHE4 81 aa14.27□□□□□ -0.13
HPS3-206ENST00000486530 GAGE6Q13070 117 aa14.26□□□□□ -0.13
HPS3-206ENST00000486530 OXLD1Q5BKU9 147 aa14.26□□□□□ -0.13
HPS3-206ENST00000486530 Q8NAQ8 132 aa14.26□□□□□ -0.13
HPS3-206ENST00000486530 RNF183Q96D59 192 aa14.26□□□□□ -0.13
HPS3-206ENST00000486530 CHCHD5Q9BSY4 110 aa14.26□□□□□ -0.13
HPS3-206ENST00000486530 IGLV5-39A0A0G2JS06 123 aa14.25□□□□□ -0.13
HPS3-206ENST00000486530 A8MZ25 164 aa14.24□□□□□ -0.13
HPS3-206ENST00000486530 DEFB4AO15263 64 aa14.24□□□□□ -0.13
HPS3-206ENST00000486530 DAD1P61803 113 aa14.24□□□□□ -0.13
HPS3-206ENST00000486530 RPL24P83731 157 aaKnown RBP14.23□□□□□ -0.13
HPS3-206ENST00000486530 LITAFQ99732 161 aa14.23□□□□□ -0.13
HPS3-206ENST00000486530 PGPEP1Q9NXJ5 209 aa14.23□□□□□ -0.13
HPS3-206ENST00000486530 NDUFA1O15239 70 aa14.23□□□□□ -0.13
HPS3-206ENST00000486530 PAX4O43316 350 aa14.23□□□□□ -0.13
HPS3-206ENST00000486530 APOMO95445 188 aa14.23□□□□□ -0.13
HPS3-206ENST00000486530 KRTAP10-11P60412 298 aa14.23□□□□□ -0.13
HPS3-206ENST00000486530 SMIM1B2RUZ4 78 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms