RNA–Protein interactions for RNA: ENST00000484236.1

SHROOM3-206, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-206ENST00000484236 LINC00482Q8N8I6 264 aa5.29□□□□□ -1.56
SHROOM3-206ENST00000484236 CSNK1G2-AS1Q8NCQ2 148 aa5.29□□□□□ -1.56
SHROOM3-206ENST00000484236 GTSF1LQ9H1H1 148 aa5.29□□□□□ -1.56
SHROOM3-206ENST00000484236 ANK3Q12955 4377 aaKnown RBP5.28□□□□□ -1.56
SHROOM3-206ENST00000484236 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.28□□□□□ -1.56
SHROOM3-206ENST00000484236 PLAC8L1A1L4L8 177 aa5.28□□□□□ -1.56
SHROOM3-206ENST00000484236 IGKV2-29A2NJV5 120 aaPredicted RBP5.28□□□□□ -1.56
SHROOM3-206ENST00000484236 F8W1H4 67 aa5.28□□□□□ -1.56
SHROOM3-206ENST00000484236 IGHV3-30-3P0DP02 117 aa5.28□□□□□ -1.56
SHROOM3-206ENST00000484236 RPL35AP18077 110 aaKnown RBP5.28□□□□□ -1.56
SHROOM3-206ENST00000484236 RPL24P83731 157 aaKnown RBP5.28□□□□□ -1.56
SHROOM3-206ENST00000484236 Q6ZTI0 123 aa5.28□□□□□ -1.56
SHROOM3-206ENST00000484236 VSIG2Q96IQ7 327 aa5.28□□□□□ -1.56
SHROOM3-206ENST00000484236 NAA38Q9BRA0 125 aaKnown RBP5.28□□□□□ -1.56
SHROOM3-206ENST00000484236 GEMIN7Q9H840 131 aaKnown RBP5.28□□□□□ -1.56
SHROOM3-206ENST00000484236 NOP10Q9NPE3 64 aaKnown RBP5.28□□□□□ -1.56
SHROOM3-206ENST00000484236 Q9UF83 564 aa5.28□□□□□ -1.56
SHROOM3-206ENST00000484236 HELZ2Q9BYK8 2649 aaKnown RBP5.27□□□□□ -1.57
SHROOM3-206ENST00000484236 UNC79Q9P2D8 2635 aa5.27□□□□□ -1.57
SHROOM3-206ENST00000484236 ACANP16112 2415 aa5.27□□□□□ -1.57
SHROOM3-206ENST00000484236 HIVEP2P31629 2446 aa5.27□□□□□ -1.57
SHROOM3-206ENST00000484236 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.27□□□□□ -1.57
SHROOM3-206ENST00000484236 IGHV3-38A0A0C4DH36 116 aa5.27□□□□□ -1.57
SHROOM3-206ENST00000484236 SMIM9A6NGZ8 99 aa5.27□□□□□ -1.57
SHROOM3-206ENST00000484236 TIMM17BO60830 172 aa5.27□□□□□ -1.57
SHROOM3-206ENST00000484236 HERVK_113P63121 156 aa5.27□□□□□ -1.57
SHROOM3-206ENST00000484236 C9orf66Q5T8R8 295 aa5.27□□□□□ -1.57
SHROOM3-206ENST00000484236 CEMP1Q6PRD7 247 aaPredicted RBP5.27□□□□□ -1.57
SHROOM3-206ENST00000484236 Q6ZUT4 128 aa5.27□□□□□ -1.57
SHROOM3-206ENST00000484236 SBSPONQ8IVN8 264 aa5.27□□□□□ -1.57
SHROOM3-206ENST00000484236 TRGV2A0A075B6R0 118 aa5.26□□□□□ -1.57
SHROOM3-206ENST00000484236 A0A0B4J2C4 111 aa5.26□□□□□ -1.57
SHROOM3-206ENST00000484236 A0A0J9YXY3 114 aa5.26□□□□□ -1.57
SHROOM3-206ENST00000484236 KRTAP10-3P60369 221 aa5.26□□□□□ -1.57
SHROOM3-206ENST00000484236 RBX1P62877 108 aa5.26□□□□□ -1.57
SHROOM3-206ENST00000484236 ZFAND6Q6FIF0 208 aa5.26□□□□□ -1.57
SHROOM3-206ENST00000484236 C10orf126Q8N4M7 172 aa5.26□□□□□ -1.57
SHROOM3-206ENST00000484236 LINC00612Q8N6U2 182 aa5.26□□□□□ -1.57
SHROOM3-206ENST00000484236 KIR2DL5BQ8NHK3 375 aa5.26□□□□□ -1.57
SHROOM3-206ENST00000484236 RNF183Q96D59 192 aa5.26□□□□□ -1.57
SHROOM3-206ENST00000484236 SPANXDQ9BXN6 97 aa5.26□□□□□ -1.57
SHROOM3-206ENST00000484236 SPANXCQ9NY87 97 aa5.26□□□□□ -1.57
SHROOM3-206ENST00000484236 ITPR2Q14571 2701 aa5.25□□□□□ -1.57
SHROOM3-206ENST00000484236 TRBV20-1A0A075B6N2 111 aa5.25□□□□□ -1.57
SHROOM3-206ENST00000484236 UBE2L6O14933 153 aa5.25□□□□□ -1.57
SHROOM3-206ENST00000484236 GAGE7O76087 117 aa5.25□□□□□ -1.57
SHROOM3-206ENST00000484236 GAGE12FP0CL80 117 aa5.25□□□□□ -1.57
SHROOM3-206ENST00000484236 GAGE12GP0CL81 117 aa5.25□□□□□ -1.57
SHROOM3-206ENST00000484236 GAGE12IP0CL82 117 aa5.25□□□□□ -1.57
SHROOM3-206ENST00000484236 TMEM101Q96IK0 257 aa5.25□□□□□ -1.57
SHROOM3-206ENST00000484236 SMR3AQ99954 134 aa5.25□□□□□ -1.57
SHROOM3-206ENST00000484236 TMEM243Q9BU79 118 aa5.25□□□□□ -1.57
SHROOM3-206ENST00000484236 WFDC10AQ9H1F0 79 aa5.25□□□□□ -1.57
SHROOM3-206ENST00000484236 PRO1854Q9UHT4 67 aa5.25□□□□□ -1.57
SHROOM3-206ENST00000484236 NDUFA12Q9UI09 145 aa5.25□□□□□ -1.57
SHROOM3-206ENST00000484236 MTORP42345 2549 aa5.24□□□□□ -1.57
SHROOM3-206ENST00000484236 TRGV4A0A0C4DH28 118 aa5.24□□□□□ -1.57
SHROOM3-206ENST00000484236 IGLV5-39A0A0G2JS06 123 aa5.24□□□□□ -1.57
SHROOM3-206ENST00000484236 GAGE12JA6NER3 117 aa5.24□□□□□ -1.57
SHROOM3-206ENST00000484236 NDUFA1O15239 70 aa5.24□□□□□ -1.57
SHROOM3-206ENST00000484236 PAX4O43316 350 aa5.24□□□□□ -1.57
SHROOM3-206ENST00000484236 APOMO95445 188 aa5.24□□□□□ -1.57
SHROOM3-206ENST00000484236 TSPAN13O95857 204 aa5.24□□□□□ -1.57
SHROOM3-206ENST00000484236 CFC1BP0CG36 223 aa5.24□□□□□ -1.57
SHROOM3-206ENST00000484236 CFC1P0CG37 223 aa5.24□□□□□ -1.57
SHROOM3-206ENST00000484236 LINC00694P0DN24 101 aa5.24□□□□□ -1.57
SHROOM3-206ENST00000484236 IFITM1P13164 125 aa5.24□□□□□ -1.57
SHROOM3-206ENST00000484236 GAGE4Q13068 117 aa5.24□□□□□ -1.57
SHROOM3-206ENST00000484236 GAGE5Q13069 117 aa5.24□□□□□ -1.57
SHROOM3-206ENST00000484236 FHL2Q14192 279 aa5.24□□□□□ -1.57
SHROOM3-206ENST00000484236 GAGE13Q4V321 117 aa5.24□□□□□ -1.57
SHROOM3-206ENST00000484236 RNASE13Q5GAN3 156 aaKnown RBP5.24□□□□□ -1.57
SHROOM3-206ENST00000484236 NTM-AS1Q6ZSK4 140 aa5.24□□□□□ -1.57
SHROOM3-206ENST00000484236 COPS9Q8WXC6 57 aa5.24□□□□□ -1.57
SHROOM3-206ENST00000484236 CDC42SE2Q9NRR3 84 aa5.24□□□□□ -1.57
SHROOM3-206ENST00000484236 ZNF469Q96JG9 3925 aaPredicted RBP5.24□□□□□ -1.57
SHROOM3-206ENST00000484236 IGHV3-64A0A075B6Q5 118 aa5.23□□□□□ -1.57
SHROOM3-206ENST00000484236 TRAV8-3A0A0A6YYJ7 113 aa5.23□□□□□ -1.57
SHROOM3-206ENST00000484236 A4D1N5 150 aa5.23□□□□□ -1.57
SHROOM3-206ENST00000484236 G3V4G9 280 aa5.23□□□□□ -1.57
SHROOM3-206ENST00000484236 J3QR89 54 aa5.23□□□□□ -1.57
SHROOM3-206ENST00000484236 SPINK8P0C7L1 97 aa5.23□□□□□ -1.57
SHROOM3-206ENST00000484236 CIRBPQ14011 172 aaKnown RBP5.23□□□□□ -1.57
SHROOM3-206ENST00000484236 MIAQ16674 131 aa5.23□□□□□ -1.57
SHROOM3-206ENST00000484236 LINC00242Q5T6M2 205 aa5.23□□□□□ -1.57
SHROOM3-206ENST00000484236 MUSTN1Q8IVN3 82 aa5.23□□□□□ -1.57
SHROOM3-206ENST00000484236 LITAFQ99732 161 aa5.23□□□□□ -1.57
SHROOM3-206ENST00000484236 PPDPFQ9H3Y8 114 aa5.23□□□□□ -1.57
SHROOM3-206ENST00000484236 CDKN2A-AS1Q9UH64 79 aa5.23□□□□□ -1.57
SHROOM3-206ENST00000484236 NF1P21359 2839 aa5.22□□□□□ -1.57
SHROOM3-206ENST00000484236 LYRM9A8MSI8 78 aa5.22□□□□□ -1.57
SHROOM3-206ENST00000484236 INAFM1C9JVW0 142 aa5.22□□□□□ -1.57
SHROOM3-206ENST00000484236 H3BMG7 143 aa5.22□□□□□ -1.57
SHROOM3-206ENST00000484236 CRLF1O75462 422 aa5.22□□□□□ -1.57
SHROOM3-206ENST00000484236 IGHV3-33P01772 117 aa5.22□□□□□ -1.57
SHROOM3-206ENST00000484236 ATP6V0E2Q8NHE4 81 aa5.22□□□□□ -1.57
SHROOM3-206ENST00000484236 PRO0461Q9UI25 63 aa5.22□□□□□ -1.57
SHROOM3-206ENST00000484236 ERG28Q9UKR5 140 aa5.22□□□□□ -1.57
SHROOM3-206ENST00000484236 FASNP49327 2511 aaKnown RBP5.22□□□□□ -1.57
SHROOM3-206ENST00000484236 AKAP9Q99996 3911 aa5.21□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms