RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 IL17DQ8TAD2 202 aa8.31□□□□□ -1.08
HPS4-212ENST00000481910 PYGO1Q9Y3Y4 419 aa8.31□□□□□ -1.08
HPS4-212ENST00000481910 TRAV4A0A0B4J268 109 aa8.3□□□□□ -1.08
HPS4-212ENST00000481910 IGHV3-16A0A0C4DH30 117 aa8.3□□□□□ -1.08
HPS4-212ENST00000481910 A0A0J9YWU9 116 aa8.3□□□□□ -1.08
HPS4-212ENST00000481910 SNURFLB1AK76 121 aa8.3□□□□□ -1.08
HPS4-212ENST00000481910 J3QQQ9 107 aa8.3□□□□□ -1.08
HPS4-212ENST00000481910 FGF6P10767 208 aa8.3□□□□□ -1.08
HPS4-212ENST00000481910 LYRM7Q5U5X0 104 aa8.3□□□□□ -1.08
HPS4-212ENST00000481910 NFE4Q86UQ8 179 aa8.3□□□□□ -1.08
HPS4-212ENST00000481910 ZNF575Q86XF7 245 aa8.3□□□□□ -1.08
HPS4-212ENST00000481910 RPP21Q9H633 154 aaKnown RBP8.3□□□□□ -1.08
HPS4-212ENST00000481910 OSTCQ9NRP0 149 aa8.3□□□□□ -1.08
HPS4-212ENST00000481910 U3KQK5 164 aa8.3□□□□□ -1.08
HPS4-212ENST00000481910 TRBV7-7A0A0K0K1E9 115 aa8.29□□□□□ -1.08
HPS4-212ENST00000481910 FAM236AA0A1B0GUQ0 79 aa8.29□□□□□ -1.08
HPS4-212ENST00000481910 FAM236BA0A1B0GV22 79 aa8.29□□□□□ -1.08
HPS4-212ENST00000481910 PLAC8L1A1L4L8 177 aa8.29□□□□□ -1.08
HPS4-212ENST00000481910 F2Z2F3 143 aa8.29□□□□□ -1.08
HPS4-212ENST00000481910 TRACP01848 142 aa8.29□□□□□ -1.08
HPS4-212ENST00000481910 CHCHD1Q96BP2 118 aaKnown RBP8.29□□□□□ -1.08
HPS4-212ENST00000481910 NOP10Q9NPE3 64 aaKnown RBP8.29□□□□□ -1.08
HPS4-212ENST00000481910 TIMM8BQ9Y5J9 83 aaPredicted RBP8.29□□□□□ -1.08
HPS4-212ENST00000481910 hDV102S1A0JD36 115 aa8.29□□□□□ -1.08
HPS4-212ENST00000481910 RNASE3P12724 160 aaKnown RBP8.29□□□□□ -1.08
HPS4-212ENST00000481910 PFN2P35080 140 aa8.29□□□□□ -1.08
HPS4-212ENST00000481910 FOXA3P55318 350 aaPredicted RBP8.29□□□□□ -1.08
HPS4-212ENST00000481910 PMAIP1Q13794 54 aa8.29□□□□□ -1.08
HPS4-212ENST00000481910 ANKRD29Q8N6D5 301 aa8.29□□□□□ -1.08
HPS4-212ENST00000481910 C11orf68Q9H3H3 251 aaKnown RBP8.29□□□□□ -1.08
HPS4-212ENST00000481910 TENM3Q9P273 2699 aa8.28□□□□□ -1.08
HPS4-212ENST00000481910 LAMTOR3Q9UHA4 124 aa8.28□□□□□ -1.08
HPS4-212ENST00000481910 H3BVH4 76 aa8.27□□□□□ -1.09
HPS4-212ENST00000481910 ARMS2P0C7Q2 107 aa8.27□□□□□ -1.09
HPS4-212ENST00000481910 VPREB1P12018 145 aa8.27□□□□□ -1.09
HPS4-212ENST00000481910 DAZ2Q13117 558 aaKnown RBP8.27□□□□□ -1.09
HPS4-212ENST00000481910 FAM222AQ5U5X8 452 aa8.27□□□□□ -1.09
HPS4-212ENST00000481910 LINC01545Q5VT33 79 aa8.27□□□□□ -1.09
HPS4-212ENST00000481910 V9GYV3 84 aa8.27□□□□□ -1.09
HPS4-212ENST00000481910 A8MWL6 223 aa8.27□□□□□ -1.09
HPS4-212ENST00000481910 SPART-AS1P0CW21 52 aa8.27□□□□□ -1.09
HPS4-212ENST00000481910 RPL13AP40429 203 aaKnown RBP8.27□□□□□ -1.09
HPS4-212ENST00000481910 FAM19A2Q8N3H0 131 aa8.27□□□□□ -1.09
HPS4-212ENST00000481910 CARD19Q96LW7 228 aa8.27□□□□□ -1.09
HPS4-212ENST00000481910 DKK2Q9UBU2 259 aa8.27□□□□□ -1.09
HPS4-212ENST00000481910 LYRM9A8MSI8 78 aa8.26□□□□□ -1.09
HPS4-212ENST00000481910 COX7CP15954 63 aa8.26□□□□□ -1.09
HPS4-212ENST00000481910 CEND1Q8N111 149 aa8.26□□□□□ -1.09
HPS4-212ENST00000481910 CELA1Q9UNI1 258 aa8.26□□□□□ -1.09
HPS4-212ENST00000481910 PHLDA3Q9Y5J5 127 aa8.26□□□□□ -1.09
HPS4-212ENST00000481910 MUC4Q99102 2169 aa8.26□□□□□ -1.09
HPS4-212ENST00000481910 TRGV1A0A0A0MS02 117 aa8.25□□□□□ -1.09
HPS4-212ENST00000481910 IGHV1-24A0A0C4DH33 117 aa8.25□□□□□ -1.09
HPS4-212ENST00000481910 P0DMU3 169 aa8.25□□□□□ -1.09
HPS4-212ENST00000481910 FAM231AP0DMU4 169 aa8.25□□□□□ -1.09
HPS4-212ENST00000481910 FAM231CP0DMU5 169 aa8.25□□□□□ -1.09
HPS4-212ENST00000481910 DEFB130BP0DP73 79 aa8.25□□□□□ -1.09
HPS4-212ENST00000481910 DEFB130AP0DP74 79 aa8.25□□□□□ -1.09
HPS4-212ENST00000481910 C11orf45Q8TAV5 145 aa8.25□□□□□ -1.09
HPS4-212ENST00000481910 NDUFC2-KCTD14E9PQ53 114 aa8.25□□□□□ -1.09
HPS4-212ENST00000481910 H7C1H1 209 aa8.25□□□□□ -1.09
HPS4-212ENST00000481910 SPINK4O60575 86 aa8.25□□□□□ -1.09
HPS4-212ENST00000481910 MED14OSP0DP75 135 aa8.25□□□□□ -1.09
HPS4-212ENST00000481910 LGALS9BQ3B8N2 356 aa8.25□□□□□ -1.09
HPS4-212ENST00000481910 ZNF876PQ49A33 203 aa8.25□□□□□ -1.09
HPS4-212ENST00000481910 Q6ZTI0 123 aa8.25□□□□□ -1.09
HPS4-212ENST00000481910 SCGB1C2P0DMR2 95 aa8.24□□□□□ -1.09
HPS4-212ENST00000481910 LYZL1Q6UWQ5 148 aa8.24□□□□□ -1.09
HPS4-212ENST00000481910 LINC01600Q96MT4 127 aa8.24□□□□□ -1.09
HPS4-212ENST00000481910 GFRA4Q9GZZ7 299 aa8.24□□□□□ -1.09
HPS4-212ENST00000481910 TRAV13-1A0A0B4J241 112 aa8.23□□□□□ -1.09
HPS4-212ENST00000481910 M0R381 172 aa8.23□□□□□ -1.09
HPS4-212ENST00000481910 DAD1P61803 113 aa8.23□□□□□ -1.09
HPS4-212ENST00000481910 SPANXN1Q5VSR9 72 aa8.23□□□□□ -1.09
HPS4-212ENST00000481910 COL7A1Q02388 2944 aa8.23□□□□□ -1.09
HPS4-212ENST00000481910 TRGV2A0A075B6R0 118 aa8.23□□□□□ -1.09
HPS4-212ENST00000481910 HIGD1CA8MV81 97 aa8.23□□□□□ -1.09
HPS4-212ENST00000481910 A8MWV9 139 aa8.23□□□□□ -1.09
HPS4-212ENST00000481910 LEPROTL1O95214 131 aa8.23□□□□□ -1.09
HPS4-212ENST00000481910 PGLYRP4Q96LB8 373 aa8.23□□□□□ -1.09
HPS4-212ENST00000481910 SMIM27A0A1W2PRY6 76 aa8.22□□□□□ -1.09
HPS4-212ENST00000481910 OXTP01178 125 aa8.22□□□□□ -1.09
HPS4-212ENST00000481910 GATA1P15976 413 aaPredicted RBP8.22□□□□□ -1.09
HPS4-212ENST00000481910 NANOS2P60321 138 aaKnown RBP8.22□□□□□ -1.09
HPS4-212ENST00000481910 C12orf74Q32Q52 190 aa8.22□□□□□ -1.09
HPS4-212ENST00000481910 LINC00612Q8N6U2 182 aa8.22□□□□□ -1.09
HPS4-212ENST00000481910 CHCHD5Q9BSY4 110 aa8.22□□□□□ -1.09
HPS4-212ENST00000481910 EPM2AB3EWF7 344 aa8.21□□□□□ -1.09
HPS4-212ENST00000481910 SMCPP49901 116 aaPredicted RBP8.21□□□□□ -1.09
HPS4-212ENST00000481910 C15orf53Q8NAA6 179 aa8.21□□□□□ -1.09
HPS4-212ENST00000481910 PRKDCP78527 4128 aaKnown RBP8.21□□□□□ -1.09
HPS4-212ENST00000481910 FAM240AA0A1B0GVK7 77 aa8.21□□□□□ -1.1
HPS4-212ENST00000481910 CACNG7P62955 275 aa8.21□□□□□ -1.1
HPS4-212ENST00000481910 PIK3CD-AS1Q5SR53 167 aa8.21□□□□□ -1.1
HPS4-212ENST00000481910 AMN1Q8IY45 258 aa8.21□□□□□ -1.1
HPS4-212ENST00000481910 MSRB1Q9NZV6 116 aa8.2□□□□□ -1.1
HPS4-212ENST00000481910 TWIST1Q15672 202 aa8.19□□□□□ -1.1
HPS4-212ENST00000481910 Q6ZTC4 211 aa8.19□□□□□ -1.1
HPS4-212ENST00000481910 C18orf15Q96N68 181 aa8.19□□□□□ -1.1
HPS4-212ENST00000481910 STAB2Q8WWQ8 2551 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms