RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 LINC00575Q6W349 94 aa0.34□□□□□ -2.36
COPA-204ENST00000481522 LRRC18Q8N456 261 aa0.34□□□□□ -2.36
COPA-204ENST00000481522 NIT2Q9NQR4 276 aa0.34□□□□□ -2.36
COPA-204ENST00000481522 MFSD11O43934 449 aa0.33□□□□□ -2.36
COPA-204ENST00000481522 ERP29P30040 261 aaKnown RBP0.33□□□□□ -2.36
COPA-204ENST00000481522 PIGPP57054 158 aa0.33□□□□□ -2.36
COPA-204ENST00000481522 TAF1AQ15573 450 aaPredicted RBP0.33□□□□□ -2.36
COPA-204ENST00000481522 RRN3P1Q2M238 152 aa0.33□□□□□ -2.36
COPA-204ENST00000481522 RGS21Q2M5E4 152 aa0.33□□□□□ -2.36
COPA-204ENST00000481522 Q5XG85 94 aa0.33□□□□□ -2.36
COPA-204ENST00000481522 TEN1Q86WV5 123 aa0.33□□□□□ -2.36
COPA-204ENST00000481522 STAG3L4Q8TBR4 150 aa0.33□□□□□ -2.36
COPA-204ENST00000481522 GNPDA2Q8TDQ7 276 aa0.33□□□□□ -2.36
COPA-204ENST00000481522 CANT1Q8WVQ1 401 aa0.33□□□□□ -2.36
COPA-204ENST00000481522 SNRNP25Q9BV90 132 aaKnown RBP0.33□□□□□ -2.36
COPA-204ENST00000481522 TMEM126AQ9H061 195 aa0.33□□□□□ -2.36
COPA-204ENST00000481522 PCBD2Q9H0N5 130 aa0.33□□□□□ -2.36
COPA-204ENST00000481522 PARVBQ9HBI1 364 aa0.33□□□□□ -2.36
COPA-204ENST00000481522 PCTPQ9UKL6 214 aa0.33□□□□□ -2.36
COPA-204ENST00000481522 ASB4Q9Y574 426 aa0.33□□□□□ -2.36
COPA-204ENST00000481522 A0A096LNI7 61 aa0.32□□□□□ -2.36
COPA-204ENST00000481522 F8W1H4 67 aa0.32□□□□□ -2.36
COPA-204ENST00000481522 IFNA7P01567 189 aa0.32□□□□□ -2.36
COPA-204ENST00000481522 PRH1P02810 166 aa0.32□□□□□ -2.36
COPA-204ENST00000481522 CD2P06729 351 aa0.32□□□□□ -2.36
COPA-204ENST00000481522 ROMO1P60602 79 aa0.32□□□□□ -2.36
COPA-204ENST00000481522 SPA17Q15506 151 aa0.32□□□□□ -2.36
COPA-204ENST00000481522 KRTAP6-1Q3LI64 71 aa0.32□□□□□ -2.36
COPA-204ENST00000481522 BCL2L15Q5TBC7 163 aa0.32□□□□□ -2.36
COPA-204ENST00000481522 ZNF833PQ6ZTB9 187 aa0.32□□□□□ -2.36
COPA-204ENST00000481522 OR5D14Q8NGL3 314 aa0.32□□□□□ -2.36
COPA-204ENST00000481522 VSTM2AQ8TAG5 236 aa0.32□□□□□ -2.36
COPA-204ENST00000481522 ZNF431Q8TF32 576 aaPredicted RBP0.32□□□□□ -2.36
COPA-204ENST00000481522 BTF3L4Q96K17 158 aa0.32□□□□□ -2.36
COPA-204ENST00000481522 ZNF714Q96N38 554 aa0.32□□□□□ -2.36
COPA-204ENST00000481522 PRRT1Q99946 306 aa0.32□□□□□ -2.36
COPA-204ENST00000481522 AIF1LQ9BQI0 150 aa0.32□□□□□ -2.36
COPA-204ENST00000481522 SLC25A21Q9BQT8 299 aaPredicted RBP0.32□□□□□ -2.36
COPA-204ENST00000481522 FXYD6-FXYD2A0A087WZ82 144 aa0.31□□□□□ -2.36
COPA-204ENST00000481522 TMEM14DPA8MWL7 114 aa0.31□□□□□ -2.36
COPA-204ENST00000481522 E7EUB6 86 aa0.31□□□□□ -2.36
COPA-204ENST00000481522 H3BRM9 83 aa0.31□□□□□ -2.36
COPA-204ENST00000481522 OR7C1O76099 320 aaPredicted RBP0.31□□□□□ -2.36
COPA-204ENST00000481522 MYL5Q02045 173 aa0.31□□□□□ -2.36
COPA-204ENST00000481522 AKIRIN2Q53H80 203 aa0.31□□□□□ -2.36
COPA-204ENST00000481522 OTUD6BQ8N6M0 293 aa0.31□□□□□ -2.36
COPA-204ENST00000481522 SIGMAR1Q99720 223 aa0.31□□□□□ -2.36
COPA-204ENST00000481522 NMNAT1Q9HAN9 279 aaPredicted RBP0.31□□□□□ -2.36
COPA-204ENST00000481522 TRBV19A0A075B6N1 114 aa0.3□□□□□ -2.36
COPA-204ENST00000481522 TRAV4A0A0B4J268 109 aa0.3□□□□□ -2.36
COPA-204ENST00000481522 GGCTO75223 188 aaKnown RBP0.3□□□□□ -2.36
COPA-204ENST00000481522 ERC2-IT1O76042 136 aa0.3□□□□□ -2.36
COPA-204ENST00000481522 CDKN2CP42773 168 aa0.3□□□□□ -2.36
COPA-204ENST00000481522 SERPINB9P50453 376 aa0.3□□□□□ -2.36
COPA-204ENST00000481522 SNRPFP62306 86 aaKnown RBP0.3□□□□□ -2.36
COPA-204ENST00000481522 PSPHP78330 225 aa0.3□□□□□ -2.36
COPA-204ENST00000481522 SARNPP82979 210 aaKnown RBP0.3□□□□□ -2.36
COPA-204ENST00000481522 MCEEQ96PE7 176 aa0.3□□□□□ -2.36
COPA-204ENST00000481522 TMEM138Q9NPI0 162 aa0.3□□□□□ -2.36
COPA-204ENST00000481522 M0R378 163 aa0.29□□□□□ -2.36
COPA-204ENST00000481522 COX7CP15954 63 aa0.29□□□□□ -2.36
COPA-204ENST00000481522 RPS29P62273 56 aaKnown RBP0.29□□□□□ -2.36
COPA-204ENST00000481522 CDK6Q00534 326 aa0.29□□□□□ -2.36
COPA-204ENST00000481522 CST11Q9H112 138 aa0.29□□□□□ -2.36
COPA-204ENST00000481522 SLC22A13Q9Y226 551 aa0.29□□□□□ -2.36
COPA-204ENST00000481522 C17orf112F2Z3M2 114 aa0.28□□□□□ -2.36
COPA-204ENST00000481522 H3BUA1 57 aa0.28□□□□□ -2.36
COPA-204ENST00000481522 TAX1BP3O14907 124 aa0.28□□□□□ -2.36
COPA-204ENST00000481522 EDDM3BP56851 147 aa0.28□□□□□ -2.36
COPA-204ENST00000481522 UBE2BP63146 152 aa0.28□□□□□ -2.36
COPA-204ENST00000481522 LIN52Q52LA3 116 aa0.28□□□□□ -2.36
COPA-204ENST00000481522 EIF5AL1Q6IS14 154 aaKnown RBP0.28□□□□□ -2.36
COPA-204ENST00000481522 PHF5AQ7RTV0 110 aaKnown RBP0.28□□□□□ -2.36
COPA-204ENST00000481522 OR10AC1Q8NH08 325 aa0.28□□□□□ -2.36
COPA-204ENST00000481522 MT1LQ93083 61 aa0.28□□□□□ -2.36
COPA-204ENST00000481522 USMG5Q96IX5 58 aa0.28□□□□□ -2.36
COPA-204ENST00000481522 OR2H1Q9GZK4 316 aa0.28□□□□□ -2.36
COPA-204ENST00000481522 PBOV1Q9GZY1 135 aa0.28□□□□□ -2.36
COPA-204ENST00000481522 A0A0D9SG42 100 aa0.27□□□□□ -2.37
COPA-204ENST00000481522 CST8O60676 142 aa0.27□□□□□ -2.37
COPA-204ENST00000481522 UBE2D3P61077 147 aa0.27□□□□□ -2.37
COPA-204ENST00000481522 EXOC3-AS1Q8N2X6 119 aa0.27□□□□□ -2.37
COPA-204ENST00000481522 NOP10Q9NPE3 64 aaKnown RBP0.27□□□□□ -2.37
COPA-204ENST00000481522 A0A087WSZ3 146 aa0.26□□□□□ -2.37
COPA-204ENST00000481522 OR10J4P0C629 311 aa0.26□□□□□ -2.37
COPA-204ENST00000481522 PHBP35232 272 aa0.26□□□□□ -2.37
COPA-204ENST00000481522 RTL8BQ17RB0 113 aa0.26□□□□□ -2.37
COPA-204ENST00000481522 SPATA45Q537H7 98 aa0.26□□□□□ -2.37
COPA-204ENST00000481522 NCBP2-AS2Q69YL0 99 aa0.26□□□□□ -2.37
COPA-204ENST00000481522 GOLT1AQ6ZVE7 132 aa0.26□□□□□ -2.37
COPA-204ENST00000481522 RAB37Q96AX2 223 aa0.26□□□□□ -2.37
COPA-204ENST00000481522 NPCDR1Q9BY65 106 aa0.26□□□□□ -2.37
COPA-204ENST00000481522 NDUFA12Q9UI09 145 aa0.26□□□□□ -2.37
COPA-204ENST00000481522 FAM32AQ9Y421 112 aaKnown RBP0.26□□□□□ -2.37
COPA-204ENST00000481522 TRBV20-1A0A075B6N2 111 aa0.25□□□□□ -2.37
COPA-204ENST00000481522 DEFB1P60022 68 aa0.25□□□□□ -2.37
COPA-204ENST00000481522 MRPS15P82914 257 aaKnown RBP0.25□□□□□ -2.37
COPA-204ENST00000481522 SLC48A1Q6P1K1 146 aa0.25□□□□□ -2.37
COPA-204ENST00000481522 OR10X1Q8NGY0 326 aa0.25□□□□□ -2.37
COPA-204ENST00000481522 GRPEL2Q8TAA5 225 aa0.25□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms