RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 SPAG17Q6Q759 2223 aa4.6□□□□□ -1.67
LSM5-210ENST00000480956 NUPR1O60356 82 aa4.6□□□□□ -1.67
LSM5-210ENST00000480956 SEC11AP67812 179 aa4.6□□□□□ -1.67
LSM5-210ENST00000480956 IGFBP7Q16270 282 aa4.6□□□□□ -1.67
LSM5-210ENST00000480956 C1orf137Q5JT78 98 aa4.6□□□□□ -1.67
LSM5-210ENST00000480956 RPS27LQ71UM5 84 aaKnown RBP4.6□□□□□ -1.67
LSM5-210ENST00000480956 FAM213BQ8TBF2 198 aa4.6□□□□□ -1.67
LSM5-210ENST00000480956 KNL1Q8NG31 2342 aa4.6□□□□□ -1.67
LSM5-210ENST00000480956 NINQ8N4C6 2090 aa4.59□□□□□ -1.67
LSM5-210ENST00000480956 A0A087WXM4 84 aa4.59□□□□□ -1.67
LSM5-210ENST00000480956 RTL8CO15255 209 aa4.59□□□□□ -1.67
LSM5-210ENST00000480956 RNASE2P10153 161 aaKnown RBP4.59□□□□□ -1.67
LSM5-210ENST00000480956 KRTAP11-1Q8IUC1 163 aa4.59□□□□□ -1.67
LSM5-210ENST00000480956 ANAPC11Q9NYG5 84 aa4.59□□□□□ -1.67
LSM5-210ENST00000480956 CXorf51AA0A1B0GTR3 108 aa4.58□□□□□ -1.68
LSM5-210ENST00000480956 HCG22E2RYF7 251 aa4.58□□□□□ -1.68
LSM5-210ENST00000480956 TFF1P04155 84 aa4.58□□□□□ -1.68
LSM5-210ENST00000480956 CNBPP62633 177 aaKnown RBP4.58□□□□□ -1.68
LSM5-210ENST00000480956 TIMM21Q9BVV7 248 aa4.58□□□□□ -1.68
LSM5-210ENST00000480956 IGLC7A0M8Q6 106 aa4.58□□□□□ -1.68
LSM5-210ENST00000480956 TMEM30CPA0ZSE6 113 aa4.58□□□□□ -1.68
LSM5-210ENST00000480956 LINC00299Q6ZSB3 139 aa4.58□□□□□ -1.68
LSM5-210ENST00000480956 C4orf3Q8WVX3 66 aa4.58□□□□□ -1.68
LSM5-210ENST00000480956 CYP4F30PQ9H0H9 118 aa4.58□□□□□ -1.68
LSM5-210ENST00000480956 WDFY3Q8IZQ1 3526 aa4.57□□□□□ -1.68
LSM5-210ENST00000480956 TNRC6BQ9UPQ9 1833 aaKnown RBP4.57□□□□□ -1.68
LSM5-210ENST00000480956 PCNX2A6NKB5 2137 aa4.57□□□□□ -1.68
LSM5-210ENST00000480956 IGHV3-33P01772 117 aa4.57□□□□□ -1.68
LSM5-210ENST00000480956 TRAPPC2P0DI81 140 aa4.57□□□□□ -1.68
LSM5-210ENST00000480956 TRAPPC2BP0DI82 140 aa4.57□□□□□ -1.68
LSM5-210ENST00000480956 MOBPQ13875 183 aa4.57□□□□□ -1.68
LSM5-210ENST00000480956 LYPD5Q6UWN5 251 aa4.57□□□□□ -1.68
LSM5-210ENST00000480956 CYTL1Q9NRR1 136 aa4.57□□□□□ -1.68
LSM5-210ENST00000480956 RABAC1Q9UI14 185 aa4.57□□□□□ -1.68
LSM5-210ENST00000480956 SEC16AO15027 2179 aa4.57□□□□□ -1.68
LSM5-210ENST00000480956 ATRXP46100 2492 aa4.57□□□□□ -1.68
LSM5-210ENST00000480956 RP1P56715 2156 aa4.56□□□□□ -1.68
LSM5-210ENST00000480956 CRYM-AS1A6NIL9 109 aa4.56□□□□□ -1.68
LSM5-210ENST00000480956 HOXB6P17509 224 aaKnown RBP4.56□□□□□ -1.68
LSM5-210ENST00000480956 KRTAP10-9P60411 292 aa4.56□□□□□ -1.68
LSM5-210ENST00000480956 PATE1Q8WXA2 126 aa4.56□□□□□ -1.68
LSM5-210ENST00000480956 PI4KAP42356 2102 aa4.56□□□□□ -1.68
LSM5-210ENST00000480956 COX14Q96I36 57 aa4.55□□□□□ -1.68
LSM5-210ENST00000480956 LINC00167Q96N53 147 aa4.55□□□□□ -1.68
LSM5-210ENST00000480956 A0A0G2JQZ4 141 aa4.55□□□□□ -1.68
LSM5-210ENST00000480956 XAF1Q6GPH4 301 aa4.55□□□□□ -1.68
LSM5-210ENST00000480956 SERP2Q8N6R1 65 aa4.55□□□□□ -1.68
LSM5-210ENST00000480956 C22orf24Q9Y442 160 aa4.55□□□□□ -1.68
LSM5-210ENST00000480956 STATHP02808 62 aa4.54□□□□□ -1.68
LSM5-210ENST00000480956 MPV17LQ2QL34 196 aa4.54□□□□□ -1.68
LSM5-210ENST00000480956 DEFB133Q30KQ1 61 aa4.54□□□□□ -1.68
LSM5-210ENST00000480956 NDUFA11Q86Y39 141 aa4.54□□□□□ -1.68
LSM5-210ENST00000480956 KRTAP2-2Q9BYT5 123 aa4.54□□□□□ -1.68
LSM5-210ENST00000480956 CDC42SE1Q9NRR8 79 aa4.54□□□□□ -1.68
LSM5-210ENST00000480956 ORMDL1Q9P0S3 153 aa4.54□□□□□ -1.68
LSM5-210ENST00000480956 GOLGA4Q13439 2230 aaKnown RBP4.54□□□□□ -1.68
LSM5-210ENST00000480956 GPR179Q6PRD1 2367 aa4.53□□□□□ -1.68
LSM5-210ENST00000480956 IGKV2-28A0A075B6P5 120 aa4.53□□□□□ -1.68
LSM5-210ENST00000480956 IGKV2D-28P01615 120 aa4.53□□□□□ -1.68
LSM5-210ENST00000480956 IGLV3-19P01714 112 aa4.53□□□□□ -1.68
LSM5-210ENST00000480956 APOC3P02656 99 aa4.53□□□□□ -1.68
LSM5-210ENST00000480956 CSAG1Q6PB30 78 aa4.53□□□□□ -1.68
LSM5-210ENST00000480956 S100ZQ8WXG8 99 aa4.53□□□□□ -1.68
LSM5-210ENST00000480956 CACFD1Q9UGQ2 172 aa4.53□□□□□ -1.68
LSM5-210ENST00000480956 CFAP54Q96N23 3096 aa4.53□□□□□ -1.68
LSM5-210ENST00000480956 SPTY2D1-AS1A0A0U1RR47 76 aa4.52□□□□□ -1.69
LSM5-210ENST00000480956 KRTAP1-4P0C5Y4 121 aa4.52□□□□□ -1.69
LSM5-210ENST00000480956 ADIRFQ15847 76 aa4.52□□□□□ -1.69
LSM5-210ENST00000480956 IFI27L1Q96BM0 104 aa4.52□□□□□ -1.69
LSM5-210ENST00000480956 TRGV9Q99603 122 aa4.52□□□□□ -1.69
LSM5-210ENST00000480956 DMXL1Q9Y485 3027 aa4.52□□□□□ -1.69
LSM5-210ENST00000480956 CACNA1EQ15878 2313 aa4.52□□□□□ -1.69
LSM5-210ENST00000480956 ASXL3Q9C0F0 2248 aa4.52□□□□□ -1.69
LSM5-210ENST00000480956 ASPMQ8IZT6 3477 aa4.52□□□□□ -1.69
LSM5-210ENST00000480956 NDUFC1O43677 76 aa4.52□□□□□ -1.69
LSM5-210ENST00000480956 SIX6O95475 246 aa4.52□□□□□ -1.69
LSM5-210ENST00000480956 REG4Q9BYZ8 158 aa4.52□□□□□ -1.69
LSM5-210ENST00000480956 PCDH15Q96QU1 1955 aa4.51□□□□□ -1.69
LSM5-210ENST00000480956 CELSR3Q9NYQ7 3312 aa4.51□□□□□ -1.69
LSM5-210ENST00000480956 MUC6Q6W4X9 2439 aa4.51□□□□□ -1.69
LSM5-210ENST00000480956 TRAV12-3A0A0B4J271 114 aa4.51□□□□□ -1.69
LSM5-210ENST00000480956 TRBV10-1A0A0K0K1A3 114 aa4.51□□□□□ -1.69
LSM5-210ENST00000480956 SMCO4Q9NRQ5 59 aa4.51□□□□□ -1.69
LSM5-210ENST00000480956 MDC1Q14676 2089 aaKnown RBP4.51□□□□□ -1.69
LSM5-210ENST00000480956 CACNA1HO95180 2353 aa4.5□□□□□ -1.69
LSM5-210ENST00000480956 C10orf142B7Z368 130 aa4.5□□□□□ -1.69
LSM5-210ENST00000480956 FXYD1O00168 92 aa4.5□□□□□ -1.69
LSM5-210ENST00000480956 TRBV6-8A0A0A6YYG3 113 aa4.49□□□□□ -1.69
LSM5-210ENST00000480956 TRBV7-1A0A0A6YYK4 115 aa4.49□□□□□ -1.69
LSM5-210ENST00000480956 LRCOL1A6NCL2 159 aa4.49□□□□□ -1.69
LSM5-210ENST00000480956 DEFB110Q30KQ9 67 aa4.49□□□□□ -1.69
LSM5-210ENST00000480956 ST20Q9HBF5 79 aa4.49□□□□□ -1.69
LSM5-210ENST00000480956 SPCS1Q9Y6A9 102 aa4.49□□□□□ -1.69
LSM5-210ENST00000480956 UNC13CQ8NB66 2214 aa4.49□□□□□ -1.69
LSM5-210ENST00000480956 SPTBP11277 2137 aa4.49□□□□□ -1.69
LSM5-210ENST00000480956 HEATR1Q9H583 2144 aaKnown RBP4.49□□□□□ -1.69
LSM5-210ENST00000480956 FREM2Q5SZK8 3169 aa4.49□□□□□ -1.69
LSM5-210ENST00000480956 ZFHX2Q9C0A1 2572 aaPredicted RBP4.49□□□□□ -1.69
LSM5-210ENST00000480956 IGLV6-57P01721 117 aa4.49□□□□□ -1.69
LSM5-210ENST00000480956 DEFA5Q01523 94 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms