RNA–Protein interactions for RNA: ENST00000480393.5

TNFRSF25-213, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 1,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-213ENST00000480393 E9PLD3 99 aa19.57■□□□□ 0.72
TNFRSF25-213ENST00000480393 SIVA1O15304 175 aa19.57■□□□□ 0.72
TNFRSF25-213ENST00000480393 MRPS36P82909 103 aaKnown RBP19.57■□□□□ 0.72
TNFRSF25-213ENST00000480393 SBSPONQ8IVN8 264 aa19.56■□□□□ 0.72
TNFRSF25-213ENST00000480393 A0A0J9YXV3 536 aa19.56■□□□□ 0.72
TNFRSF25-213ENST00000480393 ATP5G1P05496 136 aa19.56■□□□□ 0.72
TNFRSF25-213ENST00000480393 RETNQ9HD89 108 aa19.56■□□□□ 0.72
TNFRSF25-213ENST00000480393 TEX48A0A1B0GUV7 120 aa19.55■□□□□ 0.72
TNFRSF25-213ENST00000480393 PAX4O43316 350 aa19.54■□□□□ 0.72
TNFRSF25-213ENST00000480393 AMMECR1LQ6DCA0 310 aa19.54■□□□□ 0.72
TNFRSF25-213ENST00000480393 MPV17L2Q567V2 206 aa19.54■□□□□ 0.72
TNFRSF25-213ENST00000480393 ATP6V0E2Q8NHE4 81 aa19.53■□□□□ 0.72
TNFRSF25-213ENST00000480393 CSDC2Q9Y534 153 aaKnown RBP19.52■□□□□ 0.72
TNFRSF25-213ENST00000480393 NBEAL2Q6ZNJ1 2754 aa19.52■□□□□ 0.72
TNFRSF25-213ENST00000480393 TRBV6-8A0A0A6YYG3 113 aa19.51■□□□□ 0.71
TNFRSF25-213ENST00000480393 H7C423 109 aa19.51■□□□□ 0.71
TNFRSF25-213ENST00000480393 OR5A1Q8NGJ0 315 aa19.51■□□□□ 0.71
TNFRSF25-213ENST00000480393 CMYA5Q8N3K9 4069 aa19.51■□□□□ 0.71
TNFRSF25-213ENST00000480393 ZNF22P17026 224 aaPredicted RBP19.51■□□□□ 0.71
TNFRSF25-213ENST00000480393 COL5A1-AS1Q5SY13 56 aa19.51■□□□□ 0.71
TNFRSF25-213ENST00000480393 TMEM101Q96IK0 257 aa19.51■□□□□ 0.71
TNFRSF25-213ENST00000480393 MAPKAPK5-AS1Q8N8E1 139 aa19.5■□□□□ 0.71
TNFRSF25-213ENST00000480393 COL6A5A8TX70 2615 aa19.5■□□□□ 0.71
TNFRSF25-213ENST00000480393 A0A0J9YY99 117 aa19.48■□□□□ 0.71
TNFRSF25-213ENST00000480393 F5H768 121 aa19.48■□□□□ 0.71
TNFRSF25-213ENST00000480393 HTN3P15516 51 aa19.48■□□□□ 0.71
TNFRSF25-213ENST00000480393 MYMXA0A1B0GTQ4 84 aa19.48■□□□□ 0.71
TNFRSF25-213ENST00000480393 TINCRA0A1B0GVN0 87 aa19.48■□□□□ 0.71
TNFRSF25-213ENST00000480393 CHCHD5Q9BSY4 110 aa19.48■□□□□ 0.71
TNFRSF25-213ENST00000480393 HIGD1BQ9P298 99 aa19.48■□□□□ 0.71
TNFRSF25-213ENST00000480393 TMEM223A0PJW6 202 aa19.47■□□□□ 0.71
TNFRSF25-213ENST00000480393 HSD52Q0P140 79 aa19.47■□□□□ 0.71
TNFRSF25-213ENST00000480393 BVES-AS1Q5T3Y7 98 aa19.47■□□□□ 0.71
TNFRSF25-213ENST00000480393 UBE2D1P51668 147 aa19.46■□□□□ 0.71
TNFRSF25-213ENST00000480393 GAGE6Q13070 117 aa19.46■□□□□ 0.71
TNFRSF25-213ENST00000480393 GEMIN7Q9H840 131 aaKnown RBP19.45■□□□□ 0.7
TNFRSF25-213ENST00000480393 ZNF815PA8K554 130 aa19.45■□□□□ 0.7
TNFRSF25-213ENST00000480393 ZNF25P17030 456 aaPredicted RBP19.45■□□□□ 0.7
TNFRSF25-213ENST00000480393 VSIG2Q96IQ7 327 aa19.45■□□□□ 0.7
TNFRSF25-213ENST00000480393 TRAV26-1A0A087WT03 109 aa19.44■□□□□ 0.7
TNFRSF25-213ENST00000480393 A0A1B0GV90 55 aa19.44■□□□□ 0.7
TNFRSF25-213ENST00000480393 CDC42SE2Q9NRR3 84 aa19.44■□□□□ 0.7
TNFRSF25-213ENST00000480393 A0A096LPF7 62 aa19.43■□□□□ 0.7
TNFRSF25-213ENST00000480393 PKD1L1Q8TDX9 2849 aa19.43■□□□□ 0.7
TNFRSF25-213ENST00000480393 C11orf68Q9H3H3 251 aaKnown RBP19.42■□□□□ 0.7
TNFRSF25-213ENST00000480393 LEPROTO15243 131 aa19.42■□□□□ 0.7
TNFRSF25-213ENST00000480393 LINC00469Q8N7U9 141 aa19.42■□□□□ 0.7
TNFRSF25-213ENST00000480393 MDFIQ99750 246 aa19.42■□□□□ 0.7
TNFRSF25-213ENST00000480393 PRB2P02812 416 aaPredicted RBP19.41■□□□□ 0.7
TNFRSF25-213ENST00000480393 LGALS3P17931 250 aaKnown RBP19.41■□□□□ 0.7
TNFRSF25-213ENST00000480393 IGHV3-64A0A075B6Q5 118 aa19.4■□□□□ 0.7
TNFRSF25-213ENST00000480393 J3QQQ9 107 aa19.39■□□□□ 0.7
TNFRSF25-213ENST00000480393 TIRAPP58753 221 aa19.39■□□□□ 0.69
TNFRSF25-213ENST00000480393 TSPEAR-AS2P59090 65 aa19.39■□□□□ 0.69
TNFRSF25-213ENST00000480393 SEC11AP67812 179 aa19.39■□□□□ 0.69
TNFRSF25-213ENST00000480393 C12orf74Q32Q52 190 aa19.39■□□□□ 0.69
TNFRSF25-213ENST00000480393 PLEKHB2Q96CS7 222 aa19.39■□□□□ 0.69
TNFRSF25-213ENST00000480393 ANK2Q01484 3957 aa19.38■□□□□ 0.69
TNFRSF25-213ENST00000480393 TRAV13-1A0A0B4J241 112 aa19.38■□□□□ 0.69
TNFRSF25-213ENST00000480393 HERVK_113P63121 156 aa19.37■□□□□ 0.69
TNFRSF25-213ENST00000480393 SCGB1D4Q6XE38 83 aa19.37■□□□□ 0.69
TNFRSF25-213ENST00000480393 H3BRM9 83 aa19.37■□□□□ 0.69
TNFRSF25-213ENST00000480393 ICOSQ9Y6W8 199 aa19.37■□□□□ 0.69
TNFRSF25-213ENST00000480393 DNAH3Q8TD57 4116 aa19.36■□□□□ 0.69
TNFRSF25-213ENST00000480393 MRPL23Q16540 153 aaKnown RBP19.36■□□□□ 0.69
TNFRSF25-213ENST00000480393 ORAOV1Q8WV07 137 aa19.36■□□□□ 0.69
TNFRSF25-213ENST00000480393 FAM19A3Q7Z5A8 133 aa19.35■□□□□ 0.69
TNFRSF25-213ENST00000480393 LINC00242Q5T6M2 205 aa19.34■□□□□ 0.69
TNFRSF25-213ENST00000480393 K7EIL1 84 aa19.34■□□□□ 0.69
TNFRSF25-213ENST00000480393 SPINK8P0C7L1 97 aa19.34■□□□□ 0.69
TNFRSF25-213ENST00000480393 SH2D6Q7Z4S9 175 aa19.34■□□□□ 0.69
TNFRSF25-213ENST00000480393 IGLV4-60A0A075B6I1 120 aa19.33■□□□□ 0.68
TNFRSF25-213ENST00000480393 IGLV5-45A0A087WSX0 123 aa19.33■□□□□ 0.68
TNFRSF25-213ENST00000480393 A0A0J9YWU9 116 aa19.33■□□□□ 0.68
TNFRSF25-213ENST00000480393 TMEM262E9PQX1 116 aa19.33■□□□□ 0.68
TNFRSF25-213ENST00000480393 GCSHP23434 173 aa19.33■□□□□ 0.68
TNFRSF25-213ENST00000480393 CDKN2A-AS1Q9UH64 79 aa19.33■□□□□ 0.68
TNFRSF25-213ENST00000480393 IGHV1-58A0A0C4DH39 117 aa19.32■□□□□ 0.68
TNFRSF25-213ENST00000480393 DEFB121Q5J5C9 76 aa19.32■□□□□ 0.68
TNFRSF25-213ENST00000480393 HIST1H4GQ99525 98 aa19.32■□□□□ 0.68
TNFRSF25-213ENST00000480393 SPATA25Q9BR10 227 aa19.32■□□□□ 0.68
TNFRSF25-213ENST00000480393 TRAV8-3A0A0A6YYJ7 113 aa19.31■□□□□ 0.68
TNFRSF25-213ENST00000480393 IGHV3-30-3P0DP02 117 aa19.31■□□□□ 0.68
TNFRSF25-213ENST00000480393 TAL2Q16559 108 aa19.31■□□□□ 0.68
TNFRSF25-213ENST00000480393 KPRPQ5T749 579 aaPredicted RBP19.31■□□□□ 0.68
TNFRSF25-213ENST00000480393 A6NDN8 102 aa19.31■□□□□ 0.68
TNFRSF25-213ENST00000480393 COX6A2Q02221 97 aa19.31■□□□□ 0.68
TNFRSF25-213ENST00000480393 IGKV3OR2-268A0A0C4DH90 116 aa19.28■□□□□ 0.68
TNFRSF25-213ENST00000480393 Q6ZTC4 211 aa19.28■□□□□ 0.68
TNFRSF25-213ENST00000480393 CEND1Q8N111 149 aa19.28■□□□□ 0.68
TNFRSF25-213ENST00000480393 RBX1P62877 108 aa19.27■□□□□ 0.68
TNFRSF25-213ENST00000480393 A0A1B0GUV1 79 aa19.25■□□□□ 0.67
TNFRSF25-213ENST00000480393 PTTG1IPP53801 180 aa19.25■□□□□ 0.67
TNFRSF25-213ENST00000480393 MRAPQ8TCY5 172 aa19.25■□□□□ 0.67
TNFRSF25-213ENST00000480393 C11orf45Q8TAV5 145 aa19.25■□□□□ 0.67
TNFRSF25-213ENST00000480393 TM2D3Q9BRN9 247 aa19.24■□□□□ 0.67
TNFRSF25-213ENST00000480393 FXYD2P54710 66 aa19.23■□□□□ 0.67
TNFRSF25-213ENST00000480393 TM2D2Q9BX73 214 aa19.23■□□□□ 0.67
TNFRSF25-213ENST00000480393 NANOS2P60321 138 aaKnown RBP19.22■□□□□ 0.67
TNFRSF25-213ENST00000480393 SRSF9Q13242 221 aaKnown RBP eCLIP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms