RNA–Protein interactions for RNA: ENST00000480227.5

PKD1-213, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 1 (best)

Gene PKD1, Length 2,353 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-213ENST00000480227 TSSC4Q9Y5U2 329 aaPredicted RBP12.32□□□□□ -0.44
PKD1-213ENST00000480227 IGHV1-58A0A0C4DH39 117 aa12.32□□□□□ -0.44
PKD1-213ENST00000480227 CLUHP3Q96NS8 147 aa12.32□□□□□ -0.44
PKD1-213ENST00000480227 TINCRA0A1B0GVN0 87 aa12.31□□□□□ -0.44
PKD1-213ENST00000480227 J3QR89 54 aa12.31□□□□□ -0.44
PKD1-213ENST00000480227 LYRM7Q5U5X0 104 aa12.3□□□□□ -0.44
PKD1-213ENST00000480227 Q6ZTI0 123 aa12.3□□□□□ -0.44
PKD1-213ENST00000480227 PRSS2P07478 247 aa12.3□□□□□ -0.44
PKD1-213ENST00000480227 GEMIN7Q9H840 131 aaKnown RBP12.3□□□□□ -0.44
PKD1-213ENST00000480227 NDUFA12Q9UI09 145 aa12.3□□□□□ -0.44
PKD1-213ENST00000480227 DGAT2L7PQ6IED9 249 aa12.29□□□□□ -0.44
PKD1-213ENST00000480227 IL17DQ8TAD2 202 aa12.29□□□□□ -0.44
PKD1-213ENST00000480227 TMEM263Q8WUH6 116 aaKnown RBP12.29□□□□□ -0.44
PKD1-213ENST00000480227 VSIG2Q96IQ7 327 aa12.29□□□□□ -0.44
PKD1-213ENST00000480227 RNASE1P07998 156 aaKnown RBP12.29□□□□□ -0.44
PKD1-213ENST00000480227 HIVEP2P31629 2446 aa12.28□□□□□ -0.44
PKD1-213ENST00000480227 LITAFQ99732 161 aa12.28□□□□□ -0.44
PKD1-213ENST00000480227 IGHV3-33P01772 117 aa12.28□□□□□ -0.44
PKD1-213ENST00000480227 ADAMTSL4-AS1Q5T5F5 129 aa12.28□□□□□ -0.44
PKD1-213ENST00000480227 CDKN2A-AS1Q9UH64 79 aa12.28□□□□□ -0.44
PKD1-213ENST00000480227 GIG44P09565 113 aaPredicted RBP12.27□□□□□ -0.44
PKD1-213ENST00000480227 NPC2P61916 151 aa12.27□□□□□ -0.44
PKD1-213ENST00000480227 GTSF1LQ9H1H1 148 aa12.27□□□□□ -0.44
PKD1-213ENST00000480227 ERG28Q9UKR5 140 aa12.27□□□□□ -0.44
PKD1-213ENST00000480227 NOTCH2Q04721 2471 aa12.27□□□□□ -0.45
PKD1-213ENST00000480227 FN1P02751 2386 aaKnown RBP12.27□□□□□ -0.45
PKD1-213ENST00000480227 TRBV20-1A0A075B6N2 111 aa12.27□□□□□ -0.45
PKD1-213ENST00000480227 GAGE12HA6NDE8 117 aa12.27□□□□□ -0.45
PKD1-213ENST00000480227 RPL35AP18077 110 aaKnown RBP12.26□□□□□ -0.45
PKD1-213ENST00000480227 Q1RN00 199 aa12.26□□□□□ -0.45
PKD1-213ENST00000480227 C1QTNF4Q9BXJ3 329 aa12.26□□□□□ -0.45
PKD1-213ENST00000480227 NOP10Q9NPE3 64 aaKnown RBP12.26□□□□□ -0.45
PKD1-213ENST00000480227 A0A0B4J2C4 111 aa12.26□□□□□ -0.45
PKD1-213ENST00000480227 LINC00694P0DN24 101 aa12.26□□□□□ -0.45
PKD1-213ENST00000480227 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.26□□□□□ -0.45
PKD1-213ENST00000480227 C16orf95Q9H693 158 aa12.26□□□□□ -0.45
PKD1-213ENST00000480227 SMR3AQ99954 134 aa12.25□□□□□ -0.45
PKD1-213ENST00000480227 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.25□□□□□ -0.45
PKD1-213ENST00000480227 FOXI1Q12951 378 aa12.25□□□□□ -0.45
PKD1-213ENST00000480227 NDUFA7O95182 113 aa12.24□□□□□ -0.45
PKD1-213ENST00000480227 COX6A2Q02221 97 aa12.24□□□□□ -0.45
PKD1-213ENST00000480227 K7EQD1 137 aa12.23□□□□□ -0.45
PKD1-213ENST00000480227 RPL36AP83881 106 aaKnown RBP12.23□□□□□ -0.45
PKD1-213ENST00000480227 RPL36ALQ969Q0 106 aaKnown RBP12.23□□□□□ -0.45
PKD1-213ENST00000480227 GAGE12JA6NER3 117 aa12.23□□□□□ -0.45
PKD1-213ENST00000480227 GAGE4Q13068 117 aa12.23□□□□□ -0.45
PKD1-213ENST00000480227 GAGE5Q13069 117 aa12.23□□□□□ -0.45
PKD1-213ENST00000480227 SIGMAR1Q99720 223 aa12.23□□□□□ -0.45
PKD1-213ENST00000480227 VWFP04275 2813 aa12.23□□□□□ -0.45
PKD1-213ENST00000480227 IGLV1-51P01701 117 aa12.22□□□□□ -0.45
PKD1-213ENST00000480227 NTM-AS1Q6ZSK4 140 aa12.22□□□□□ -0.45
PKD1-213ENST00000480227 C19orf73Q9NVV2 129 aa12.22□□□□□ -0.45
PKD1-213ENST00000480227 SMAGPQ0VAQ4 97 aa12.22□□□□□ -0.45
PKD1-213ENST00000480227 ZFAND6Q6FIF0 208 aa12.22□□□□□ -0.45
PKD1-213ENST00000480227 DAND5Q8N907 189 aa12.22□□□□□ -0.45
PKD1-213ENST00000480227 TMEM101Q96IK0 257 aa12.21□□□□□ -0.45
PKD1-213ENST00000480227 TRAV13-1A0A0B4J241 112 aa12.21□□□□□ -0.46
PKD1-213ENST00000480227 TRAV4A0A0B4J268 109 aa12.21□□□□□ -0.46
PKD1-213ENST00000480227 PLAC8L1A1L4L8 177 aa12.21□□□□□ -0.46
PKD1-213ENST00000480227 ATP6V0E2Q8NHE4 81 aa12.21□□□□□ -0.46
PKD1-213ENST00000480227 NBEAL2Q6ZNJ1 2754 aa12.2□□□□□ -0.46
PKD1-213ENST00000480227 FLNBO75369 2602 aaKnown RBP12.2□□□□□ -0.46
PKD1-213ENST00000480227 TIRAPP58753 221 aa12.2□□□□□ -0.46
PKD1-213ENST00000480227 MIAQ16674 131 aa12.2□□□□□ -0.46
PKD1-213ENST00000480227 LINC00242Q5T6M2 205 aa12.2□□□□□ -0.46
PKD1-213ENST00000480227 SPATA25Q9BR10 227 aa12.2□□□□□ -0.46
PKD1-213ENST00000480227 TRBV10-1A0A0K0K1A3 114 aa12.2□□□□□ -0.46
PKD1-213ENST00000480227 GAGE7O76087 117 aa12.2□□□□□ -0.46
PKD1-213ENST00000480227 GAGE12FP0CL80 117 aa12.2□□□□□ -0.46
PKD1-213ENST00000480227 GAGE12GP0CL81 117 aa12.2□□□□□ -0.46
PKD1-213ENST00000480227 GAGE12IP0CL82 117 aa12.2□□□□□ -0.46
PKD1-213ENST00000480227 HILS1P60008 231 aa12.2□□□□□ -0.46
PKD1-213ENST00000480227 SPANXDQ9BXN6 97 aa12.2□□□□□ -0.46
PKD1-213ENST00000480227 SPANXCQ9NY87 97 aa12.2□□□□□ -0.46
PKD1-213ENST00000480227 TRGV2A0A075B6R0 118 aa12.19□□□□□ -0.46
PKD1-213ENST00000480227 IGLV5-45A0A087WSX0 123 aa12.19□□□□□ -0.46
PKD1-213ENST00000480227 C9JAW5 83 aa12.19□□□□□ -0.46
PKD1-213ENST00000480227 DAZ2Q13117 558 aaKnown RBP12.19□□□□□ -0.46
PKD1-213ENST00000480227 DAZ4Q86SG3 579 aaKnown RBP12.19□□□□□ -0.46
PKD1-213ENST00000480227 TEN1Q86WV5 123 aa12.19□□□□□ -0.46
PKD1-213ENST00000480227 DAZ3Q9NR90 486 aaKnown RBP12.19□□□□□ -0.46
PKD1-213ENST00000480227 CARD19Q96LW7 228 aa12.19□□□□□ -0.46
PKD1-213ENST00000480227 ZNF625Q96I27 306 aaPredicted RBP12.18□□□□□ -0.46
PKD1-213ENST00000480227 LOC100131303A0A0U1RQF7 123 aa12.18□□□□□ -0.46
PKD1-213ENST00000480227 HERVK_113P63121 156 aa12.18□□□□□ -0.46
PKD1-213ENST00000480227 SBSPONQ8IVN8 264 aa12.18□□□□□ -0.46
PKD1-213ENST00000480227 ANKRD29Q8N6D5 301 aa12.18□□□□□ -0.46
PKD1-213ENST00000480227 OTOGQ6ZRI0 2925 aa12.18□□□□□ -0.46
PKD1-213ENST00000480227 TRIAP1O43715 76 aa12.17□□□□□ -0.46
PKD1-213ENST00000480227 SLC25A20O43772 301 aa12.17□□□□□ -0.46
PKD1-213ENST00000480227 CSNK1G2-AS1Q8NCQ2 148 aa12.17□□□□□ -0.46
PKD1-213ENST00000480227 A0A0U1RRA0 63 aa12.16□□□□□ -0.46
PKD1-213ENST00000480227 C16orf74Q96GX8 76 aa12.16□□□□□ -0.46
PKD1-213ENST00000480227 NDUFA1O15239 70 aa12.16□□□□□ -0.46
PKD1-213ENST00000480227 PPDPFLQ8WWR9 84 aa12.16□□□□□ -0.46
PKD1-213ENST00000480227 Q9H8V8 135 aa12.16□□□□□ -0.46
PKD1-213ENST00000480227 CMC4P56277 68 aaPredicted RBP12.15□□□□□ -0.46
PKD1-213ENST00000480227 KRTAP10-3P60369 221 aa12.15□□□□□ -0.46
PKD1-213ENST00000480227 ATXN8Q156A1 80 aa12.14□□□□□ -0.47
PKD1-213ENST00000480227 CDC42SE2Q9NRR3 84 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms