RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 RPL36AP83881 106 aaKnown RBP9.28□□□□□ -0.92
SEC13-216ENST00000479868 RPL36ALQ969Q0 106 aaKnown RBP9.28□□□□□ -0.92
SEC13-216ENST00000479868 TRBV10-1A0A0K0K1A3 114 aa9.27□□□□□ -0.93
SEC13-216ENST00000479868 A0A1B0GWB2 263 aa9.27□□□□□ -0.93
SEC13-216ENST00000479868 IGLL5B9A064 214 aa9.27□□□□□ -0.93
SEC13-216ENST00000479868 OCIAD2Q56VL3 154 aa9.27□□□□□ -0.93
SEC13-216ENST00000479868 OR5A1Q8NGJ0 315 aa9.27□□□□□ -0.93
SEC13-216ENST00000479868 TRGV2A0A075B6R0 118 aa9.27□□□□□ -0.93
SEC13-216ENST00000479868 A0A1B0GV72 72 aa9.27□□□□□ -0.93
SEC13-216ENST00000479868 SHISA2Q6UWI4 295 aa9.27□□□□□ -0.93
SEC13-216ENST00000479868 GAGE12JA6NER3 117 aa9.26□□□□□ -0.93
SEC13-216ENST00000479868 LINC00694P0DN24 101 aa9.26□□□□□ -0.93
SEC13-216ENST00000479868 UBE2D3P61077 147 aa9.26□□□□□ -0.93
SEC13-216ENST00000479868 UBE2D2P62837 147 aa9.26□□□□□ -0.93
SEC13-216ENST00000479868 GAGE4Q13068 117 aa9.26□□□□□ -0.93
SEC13-216ENST00000479868 GAGE5Q13069 117 aa9.26□□□□□ -0.93
SEC13-216ENST00000479868 GAGE13Q4V321 117 aa9.26□□□□□ -0.93
SEC13-216ENST00000479868 NTM-AS1Q6ZSK4 140 aa9.26□□□□□ -0.93
SEC13-216ENST00000479868 OVOL2Q9BRP0 275 aa9.26□□□□□ -0.93
SEC13-216ENST00000479868 TRAV8-3A0A0A6YYJ7 113 aa9.26□□□□□ -0.93
SEC13-216ENST00000479868 ATRQ13535 2644 aa9.25□□□□□ -0.93
SEC13-216ENST00000479868 TINCRA0A1B0GVN0 87 aa9.25□□□□□ -0.93
SEC13-216ENST00000479868 IGHV3-30-3P0DP02 117 aa9.25□□□□□ -0.93
SEC13-216ENST00000479868 TIMM21Q9BVV7 248 aa9.25□□□□□ -0.93
SEC13-216ENST00000479868 SPANXB1Q9NS25 103 aaPredicted RBP9.25□□□□□ -0.93
SEC13-216ENST00000479868 NBEAL2Q6ZNJ1 2754 aa9.24□□□□□ -0.93
SEC13-216ENST00000479868 IGHV3-30P01768 117 aa9.24□□□□□ -0.93
SEC13-216ENST00000479868 IGHV3-30-5P0DP03 117 aa9.24□□□□□ -0.93
SEC13-216ENST00000479868 DAZ4Q86SG3 579 aaKnown RBP9.24□□□□□ -0.93
SEC13-216ENST00000479868 DAZ3Q9NR90 486 aaKnown RBP9.24□□□□□ -0.93
SEC13-216ENST00000479868 LOC100131303A0A0U1RQF7 123 aa9.24□□□□□ -0.93
SEC13-216ENST00000479868 K7ERU9 68 aa9.24□□□□□ -0.93
SEC13-216ENST00000479868 UBE2D1P51668 147 aa9.24□□□□□ -0.93
SEC13-216ENST00000479868 C10orf126Q8N4M7 172 aa9.24□□□□□ -0.93
SEC13-216ENST00000479868 DGAT2L7PQ6IED9 249 aa9.23□□□□□ -0.93
SEC13-216ENST00000479868 SCGB1A1P11684 91 aa9.23□□□□□ -0.93
SEC13-216ENST00000479868 TEP1Q99973 2627 aaKnown RBP9.23□□□□□ -0.93
SEC13-216ENST00000479868 TRRAPQ9Y4A5 3859 aa9.23□□□□□ -0.93
SEC13-216ENST00000479868 IGHV1-58A0A0C4DH39 117 aa9.22□□□□□ -0.93
SEC13-216ENST00000479868 A8MZ25 164 aa9.22□□□□□ -0.93
SEC13-216ENST00000479868 CRLF1O75462 422 aa9.22□□□□□ -0.93
SEC13-216ENST00000479868 SPINK8P0C7L1 97 aa9.22□□□□□ -0.93
SEC13-216ENST00000479868 SBSPONQ8IVN8 264 aa9.22□□□□□ -0.93
SEC13-216ENST00000479868 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.22□□□□□ -0.93
SEC13-216ENST00000479868 TRGV4A0A0C4DH28 118 aa9.21□□□□□ -0.93
SEC13-216ENST00000479868 TRBV6-4A0A1B0GX49 114 aa9.21□□□□□ -0.93
SEC13-216ENST00000479868 INSL3P51460 131 aa9.21□□□□□ -0.93
SEC13-216ENST00000479868 VSIG2Q96IQ7 327 aa9.21□□□□□ -0.93
SEC13-216ENST00000479868 CITED1Q99966 193 aa9.21□□□□□ -0.93
SEC13-216ENST00000479868 GEMIN7Q9H840 131 aaKnown RBP9.21□□□□□ -0.93
SEC13-216ENST00000479868 PGPEP1Q9NXJ5 209 aa9.21□□□□□ -0.93
SEC13-216ENST00000479868 APOMO95445 188 aa9.21□□□□□ -0.94
SEC13-216ENST00000479868 FHL2Q14192 279 aa9.21□□□□□ -0.94
SEC13-216ENST00000479868 C9orf66Q5T8R8 295 aa9.21□□□□□ -0.94
SEC13-216ENST00000479868 CDKN2A-AS1Q9UH64 79 aa9.21□□□□□ -0.94
SEC13-216ENST00000479868 A0A0J9YXY3 114 aa9.2□□□□□ -0.94
SEC13-216ENST00000479868 COX6A2Q02221 97 aa9.2□□□□□ -0.94
SEC13-216ENST00000479868 CSDC2Q9Y534 153 aaKnown RBP9.2□□□□□ -0.94
SEC13-216ENST00000479868 IGLV5-45A0A087WSX0 123 aa9.19□□□□□ -0.94
SEC13-216ENST00000479868 CFC1BP0CG36 223 aa9.19□□□□□ -0.94
SEC13-216ENST00000479868 CFC1P0CG37 223 aa9.19□□□□□ -0.94
SEC13-216ENST00000479868 DEFB130BP0DP73 79 aa9.19□□□□□ -0.94
SEC13-216ENST00000479868 DEFB130AP0DP74 79 aa9.19□□□□□ -0.94
SEC13-216ENST00000479868 TIRAPP58753 221 aa9.19□□□□□ -0.94
SEC13-216ENST00000479868 GTSF1LQ9H1H1 148 aa9.19□□□□□ -0.94
SEC13-216ENST00000479868 X6R8D5 127 aa9.19□□□□□ -0.94
SEC13-216ENST00000479868 LINC00242Q5T6M2 205 aa9.19□□□□□ -0.94
SEC13-216ENST00000479868 NDUFA12Q9UI09 145 aa9.19□□□□□ -0.94
SEC13-216ENST00000479868 TSPAN13O95857 204 aa9.18□□□□□ -0.94
SEC13-216ENST00000479868 LITAFQ99732 161 aa9.18□□□□□ -0.94
SEC13-216ENST00000479868 CDC42SE2Q9NRR3 84 aa9.18□□□□□ -0.94
SEC13-216ENST00000479868 TRAV13-1A0A0B4J241 112 aa9.17□□□□□ -0.94
SEC13-216ENST00000479868 TMEM243Q9BU79 118 aa9.17□□□□□ -0.94
SEC13-216ENST00000479868 MUSTN1Q8IVN3 82 aa9.17□□□□□ -0.94
SEC13-216ENST00000479868 KIR2DL5BQ8NHK3 375 aa9.17□□□□□ -0.94
SEC13-216ENST00000479868 H3BMG7 143 aa9.16□□□□□ -0.94
SEC13-216ENST00000479868 UBE2L6O14933 153 aa9.16□□□□□ -0.94
SEC13-216ENST00000479868 SFTA2Q6UW10 78 aa9.16□□□□□ -0.94
SEC13-216ENST00000479868 LINC00612Q8N6U2 182 aa9.16□□□□□ -0.94
SEC13-216ENST00000479868 TMEM101Q96IK0 257 aa9.16□□□□□ -0.94
SEC13-216ENST00000479868 EIF4EBP3O60516 100 aaPredicted RBP9.16□□□□□ -0.94
SEC13-216ENST00000479868 HERVK_113P63121 156 aa9.16□□□□□ -0.94
SEC13-216ENST00000479868 ZFAND6Q6FIF0 208 aa9.16□□□□□ -0.94
SEC13-216ENST00000479868 FAM19A3Q7Z5A8 133 aa9.16□□□□□ -0.94
SEC13-216ENST00000479868 F8P00451 2351 aa9.15□□□□□ -0.94
SEC13-216ENST00000479868 ADAMTSL4-AS1Q5T5F5 129 aa9.15□□□□□ -0.94
SEC13-216ENST00000479868 TRAV26-1A0A087WT03 109 aa9.14□□□□□ -0.95
SEC13-216ENST00000479868 DEFB135Q30KP9 77 aa9.14□□□□□ -0.95
SEC13-216ENST00000479868 FLNBO75369 2602 aaKnown RBP9.14□□□□□ -0.95
SEC13-216ENST00000479868 RPL24P83731 157 aaKnown RBP9.14□□□□□ -0.95
SEC13-216ENST00000479868 TRBV6-8A0A0A6YYG3 113 aa9.13□□□□□ -0.95
SEC13-216ENST00000479868 LOC107984156A0A0G2JMH3 177 aa9.13□□□□□ -0.95
SEC13-216ENST00000479868 IGLV5-39A0A0G2JS06 123 aa9.13□□□□□ -0.95
SEC13-216ENST00000479868 SMIM9A6NGZ8 99 aa9.13□□□□□ -0.95
SEC13-216ENST00000479868 SMAGPQ0VAQ4 97 aa9.13□□□□□ -0.95
SEC13-216ENST00000479868 GAGE6Q13070 117 aa9.13□□□□□ -0.95
SEC13-216ENST00000479868 ARL17AQ8IVW1 177 aa9.13□□□□□ -0.95
SEC13-216ENST00000479868 PRO1854Q9UHT4 67 aa9.13□□□□□ -0.95
SEC13-216ENST00000479868 SMIM1B2RUZ4 78 aa9.13□□□□□ -0.95
SEC13-216ENST00000479868 MTURNQ8N3F0 131 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 189.4 ms