RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 TRBV7-3A0A075B6L6 115 aa4.69□□□□□ -1.66
VCP-205ENST00000479300 C16orf90A8MZG2 172 aa4.69□□□□□ -1.66
VCP-205ENST00000479300 DPM2O94777 84 aa4.69□□□□□ -1.66
VCP-205ENST00000479300 IGKCP01834 107 aa4.69□□□□□ -1.66
VCP-205ENST00000479300 IFI27P40305 119 aaPredicted RBP4.69□□□□□ -1.66
VCP-205ENST00000479300 TWIST1Q15672 202 aa4.69□□□□□ -1.66
VCP-205ENST00000479300 ORMDL3Q8N138 153 aa4.69□□□□□ -1.66
VCP-205ENST00000479300 SMIM20Q8N5G0 67 aa4.69□□□□□ -1.66
VCP-205ENST00000479300 TMEM126AQ9H061 195 aa4.69□□□□□ -1.66
VCP-205ENST00000479300 TRAV5A0A0B4J249 113 aa4.68□□□□□ -1.66
VCP-205ENST00000479300 PGPA6NDG6 321 aa4.68□□□□□ -1.66
VCP-205ENST00000479300 FABP5P3A8MUU1 101 aa4.68□□□□□ -1.66
VCP-205ENST00000479300 H3BTX0 84 aa4.68□□□□□ -1.66
VCP-205ENST00000479300 TCRAP04437 139 aa4.68□□□□□ -1.66
VCP-205ENST00000479300 PYYP10082 97 aa4.68□□□□□ -1.66
VCP-205ENST00000479300 CCL18P55774 89 aa4.68□□□□□ -1.66
VCP-205ENST00000479300 NDUFV3P56181 108 aaKnown RBP4.68□□□□□ -1.66
VCP-205ENST00000479300 GNG5P63218 68 aa4.68□□□□□ -1.66
VCP-205ENST00000479300 MORN5Q5VZ52 161 aa4.68□□□□□ -1.66
VCP-205ENST00000479300 FAM104BQ5XKR9 115 aa4.68□□□□□ -1.66
VCP-205ENST00000479300 TMEM263Q8WUH6 116 aaKnown RBP4.68□□□□□ -1.66
VCP-205ENST00000479300 C17orf77Q96MU5 243 aa4.68□□□□□ -1.66
VCP-205ENST00000479300 MAP1LC3AQ9H492 121 aa4.68□□□□□ -1.66
VCP-205ENST00000479300 OTORQ9NRC9 128 aa4.68□□□□□ -1.66
VCP-205ENST00000479300 PLA2G2DQ9UNK4 145 aa4.68□□□□□ -1.66
VCP-205ENST00000479300 HHLA3Q9XRX5 114 aa4.68□□□□□ -1.66
VCP-205ENST00000479300 MYCBP2O75592 4640 aa4.68□□□□□ -1.66
VCP-205ENST00000479300 TRBV20-1A0A075B6N2 111 aa4.67□□□□□ -1.66
VCP-205ENST00000479300 A0A087WX48 190 aa4.67□□□□□ -1.66
VCP-205ENST00000479300 IGKV2D-26A0A0A0MRZ7 120 aa4.67□□□□□ -1.66
VCP-205ENST00000479300 TRAV12-3A0A0B4J271 114 aa4.67□□□□□ -1.66
VCP-205ENST00000479300 MRPS12O15235 138 aaKnown RBP4.67□□□□□ -1.66
VCP-205ENST00000479300 ARMS2P0C7Q2 107 aa4.67□□□□□ -1.66
VCP-205ENST00000479300 FCER1GP30273 86 aa4.67□□□□□ -1.66
VCP-205ENST00000479300 GAGE2BQ13066 116 aa4.67□□□□□ -1.66
VCP-205ENST00000479300 MRPL23Q16540 153 aaKnown RBP4.67□□□□□ -1.66
VCP-205ENST00000479300 GAGE2EQ4V326 116 aa4.67□□□□□ -1.66
VCP-205ENST00000479300 TMEM78Q5T7P6 136 aa4.67□□□□□ -1.66
VCP-205ENST00000479300 C1orf134Q5TEV5 83 aa4.67□□□□□ -1.66
VCP-205ENST00000479300 TMEM75Q8N9X5 138 aa4.67□□□□□ -1.66
VCP-205ENST00000479300 MRPL53Q96EL3 112 aaKnown RBP4.67□□□□□ -1.66
VCP-205ENST00000479300 LINC00477Q96M19 166 aa4.67□□□□□ -1.66
VCP-205ENST00000479300 ODF3Q96PU9 254 aa4.67□□□□□ -1.66
VCP-205ENST00000479300 SPANXDQ9BXN6 97 aa4.67□□□□□ -1.66
VCP-205ENST00000479300 NOP10Q9NPE3 64 aaKnown RBP4.67□□□□□ -1.66
VCP-205ENST00000479300 TMEM14CQ9P0S9 112 aa4.67□□□□□ -1.66
VCP-205ENST00000479300 GAGE2DQ9UEU5 116 aa4.67□□□□□ -1.66
VCP-205ENST00000479300 FAT1Q14517 4588 aa4.67□□□□□ -1.66
VCP-205ENST00000479300 A8MWV9 139 aa4.66□□□□□ -1.66
VCP-205ENST00000479300 D6R8Y8 96 aa4.66□□□□□ -1.66
VCP-205ENST00000479300 SNCGO76070 127 aa4.66□□□□□ -1.66
VCP-205ENST00000479300 PRM2P04554 102 aa4.66□□□□□ -1.66
VCP-205ENST00000479300 PRB4P10163 310 aaPredicted RBP4.66□□□□□ -1.66
VCP-205ENST00000479300 IFITM1P13164 125 aa4.66□□□□□ -1.66
VCP-205ENST00000479300 UBE2D3P61077 147 aa4.66□□□□□ -1.66
VCP-205ENST00000479300 UBE2D2P62837 147 aa4.66□□□□□ -1.66
VCP-205ENST00000479300 PDE6HQ13956 83 aa4.66□□□□□ -1.66
VCP-205ENST00000479300 C5orf47Q569G3 176 aa4.66□□□□□ -1.66
VCP-205ENST00000479300 NFE4Q86UQ8 179 aa4.66□□□□□ -1.66
VCP-205ENST00000479300 CARD19Q96LW7 228 aa4.66□□□□□ -1.66
VCP-205ENST00000479300 LINC01600Q96MT4 127 aa4.66□□□□□ -1.66
VCP-205ENST00000479300 HIST1H4GQ99525 98 aa4.66□□□□□ -1.66
VCP-205ENST00000479300 Q9H3A6 140 aa4.66□□□□□ -1.66
VCP-205ENST00000479300 NXT2Q9NPJ8 142 aaKnown RBP4.66□□□□□ -1.66
VCP-205ENST00000479300 SPANXCQ9NY87 97 aa4.66□□□□□ -1.66
VCP-205ENST00000479300 TRBV19A0A075B6N1 114 aa4.65□□□□□ -1.67
VCP-205ENST00000479300 TRGV2A0A075B6R0 118 aa4.65□□□□□ -1.67
VCP-205ENST00000479300 MYMXA0A1B0GTQ4 84 aa4.65□□□□□ -1.67
VCP-205ENST00000479300 PRAC2D3DTV9 90 aa4.65□□□□□ -1.67
VCP-205ENST00000479300 PLNP26678 52 aa4.65□□□□□ -1.67
VCP-205ENST00000479300 RNASE4P34096 147 aaKnown RBP4.65□□□□□ -1.67
VCP-205ENST00000479300 MRPL51Q4U2R6 128 aaKnown RBP4.65□□□□□ -1.67
VCP-205ENST00000479300 TTC32Q5I0X7 151 aa4.65□□□□□ -1.67
VCP-205ENST00000479300 ZC2HC1BQ5TFG8 222 aa4.65□□□□□ -1.67
VCP-205ENST00000479300 MDFICQ9P1T7 246 aa4.65□□□□□ -1.67
VCP-205ENST00000479300 LOC389332A0A1B0GUA5 103 aa4.64□□□□□ -1.67
VCP-205ENST00000479300 CCDC179H3BU77 68 aa4.64□□□□□ -1.67
VCP-205ENST00000479300 NPYP01303 97 aa4.64□□□□□ -1.67
VCP-205ENST00000479300 IGLV2-11P01706 119 aa4.64□□□□□ -1.67
VCP-205ENST00000479300 UBE2D1P51668 147 aa4.64□□□□□ -1.67
VCP-205ENST00000479300 KRTAP10-2P60368 255 aa4.64□□□□□ -1.67
VCP-205ENST00000479300 ERCC8Q13216 396 aa4.64□□□□□ -1.67
VCP-205ENST00000479300 LYPD1Q8N2G4 141 aa4.64□□□□□ -1.67
VCP-205ENST00000479300 EXOC3-AS1Q8N2X6 119 aa4.64□□□□□ -1.67
VCP-205ENST00000479300 PTH2Q96A98 100 aa4.64□□□□□ -1.67
VCP-205ENST00000479300 VPS13BQ7Z7G8 4022 aa4.64□□□□□ -1.67
VCP-205ENST00000479300 SRRM2Q9UQ35 2752 aaKnown RBP4.64□□□□□ -1.67
VCP-205ENST00000479300 FLG2Q5D862 2391 aaPredicted RBP4.63□□□□□ -1.67
VCP-205ENST00000479300 UBR4Q5T4S7 5183 aa4.63□□□□□ -1.67
VCP-205ENST00000479300 TRGV1A0A0A0MS02 117 aa4.63□□□□□ -1.67
VCP-205ENST00000479300 TRAV12-1A0A0B4J245 112 aa4.63□□□□□ -1.67
VCP-205ENST00000479300 A0A0J9YY99 117 aa4.63□□□□□ -1.67
VCP-205ENST00000479300 NBDYA0A0U1RRE5 68 aa4.63□□□□□ -1.67
VCP-205ENST00000479300 PLAC8L1A1L4L8 177 aa4.63□□□□□ -1.67
VCP-205ENST00000479300 M0R3E3 92 aa4.63□□□□□ -1.67
VCP-205ENST00000479300 PRSS1P07477 247 aa4.63□□□□□ -1.67
VCP-205ENST00000479300 CKS2P33552 79 aa4.63□□□□□ -1.67
VCP-205ENST00000479300 PSMB2P49721 201 aa4.63□□□□□ -1.67
VCP-205ENST00000479300 ZNF415Q09FC8 603 aa4.63□□□□□ -1.67
VCP-205ENST00000479300 DAZ2Q13117 558 aaKnown RBP4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms