RNA–Protein interactions for RNA: ENST00000478644.1

HOXB3-209, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 398 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-209ENST00000478644 OR10AG1Q8NH19 301 aa4.2□□□□□ -1.74
HOXB3-209ENST00000478644 EIF5A2Q9GZV4 153 aaKnown RBP4.2□□□□□ -1.74
HOXB3-209ENST00000478644 SMDT1Q9H4I9 107 aa4.2□□□□□ -1.74
HOXB3-209ENST00000478644 DNAH5Q8TE73 4624 aa4.2□□□□□ -1.74
HOXB3-209ENST00000478644 A0A1B0GWB2 263 aa4.19□□□□□ -1.74
HOXB3-209ENST00000478644 LRCOL1A6NCL2 159 aa4.19□□□□□ -1.74
HOXB3-209ENST00000478644 SRP19P09132 144 aaKnown RBP4.19□□□□□ -1.74
HOXB3-209ENST00000478644 RAB4AP20338 218 aa4.19□□□□□ -1.74
HOXB3-209ENST00000478644 RAB4BP61018 213 aa4.19□□□□□ -1.74
HOXB3-209ENST00000478644 RAB14P61106 215 aa4.19□□□□□ -1.74
HOXB3-209ENST00000478644 CACNG7P62955 275 aa4.19□□□□□ -1.74
HOXB3-209ENST00000478644 Q5VSD8 79 aa4.19□□□□□ -1.74
HOXB3-209ENST00000478644 SPANXN1Q5VSR9 72 aa4.19□□□□□ -1.74
HOXB3-209ENST00000478644 C14orf178Q8N769 122 aaPredicted RBP4.19□□□□□ -1.74
HOXB3-209ENST00000478644 FER1L6-AS1Q8NA97 138 aa4.19□□□□□ -1.74
HOXB3-209ENST00000478644 CNFNQ9BYD5 112 aa4.19□□□□□ -1.74
HOXB3-209ENST00000478644 RPP21Q9H633 154 aaKnown RBP4.19□□□□□ -1.74
HOXB3-209ENST00000478644 KIF25-AS1Q9Y6Z4 181 aa4.19□□□□□ -1.74
HOXB3-209ENST00000478644 ABCA13Q86UQ4 5058 aa4.18□□□□□ -1.74
HOXB3-209ENST00000478644 A0A087WX48 190 aa4.18□□□□□ -1.74
HOXB3-209ENST00000478644 MUC21A0A0G2JKD1 596 aa4.18□□□□□ -1.74
HOXB3-209ENST00000478644 MUC21A0A140T8X8 626 aa4.18□□□□□ -1.74
HOXB3-209ENST00000478644 OXTP01178 125 aa4.18□□□□□ -1.74
HOXB3-209ENST00000478644 GZMBP10144 247 aa4.18□□□□□ -1.74
HOXB3-209ENST00000478644 CTRLP40313 264 aa4.18□□□□□ -1.74
HOXB3-209ENST00000478644 FOXA3P55318 350 aaPredicted RBP4.18□□□□□ -1.74
HOXB3-209ENST00000478644 PEA15Q15121 130 aa4.18□□□□□ -1.74
HOXB3-209ENST00000478644 FAM74A4Q5TZK3 123 aa4.18□□□□□ -1.74
HOXB3-209ENST00000478644 LYZL1Q6UWQ5 148 aa4.18□□□□□ -1.74
HOXB3-209ENST00000478644 MRPL52Q86TS9 123 aaKnown RBP4.18□□□□□ -1.74
HOXB3-209ENST00000478644 LINC01551Q86U37 167 aa4.18□□□□□ -1.74
HOXB3-209ENST00000478644 SMIM7Q9BQ49 75 aa4.18□□□□□ -1.74
HOXB3-209ENST00000478644 RNASE7Q9H1E1 156 aaKnown RBP4.18□□□□□ -1.74
HOXB3-209ENST00000478644 Q9UF83 564 aa4.18□□□□□ -1.74
HOXB3-209ENST00000478644 TRBV7-3A0A075B6L6 115 aa4.17□□□□□ -1.74
HOXB3-209ENST00000478644 ZNF727A8MUV8 499 aa4.17□□□□□ -1.74
HOXB3-209ENST00000478644 C9JQL5 133 aa4.17□□□□□ -1.74
HOXB3-209ENST00000478644 SMIM17P0DL12 118 aa4.17□□□□□ -1.74
HOXB3-209ENST00000478644 UBE2D3P61077 147 aa4.17□□□□□ -1.74
HOXB3-209ENST00000478644 UBE2D2P62837 147 aa4.17□□□□□ -1.74
HOXB3-209ENST00000478644 TMEM241Q24JQ0 296 aa4.17□□□□□ -1.74
HOXB3-209ENST00000478644 DEFB104AQ8WTQ1 72 aa4.17□□□□□ -1.74
HOXB3-209ENST00000478644 GTSF1Q8WW33 167 aa4.17□□□□□ -1.74
HOXB3-209ENST00000478644 AP1S3Q96PC3 154 aa4.17□□□□□ -1.74
HOXB3-209ENST00000478644 OSTCQ9NRP0 149 aa4.17□□□□□ -1.74
HOXB3-209ENST00000478644 LRP1BQ9NZR2 4599 aa4.17□□□□□ -1.74
HOXB3-209ENST00000478644 A8MWL6 223 aa4.16□□□□□ -1.74
HOXB3-209ENST00000478644 M0QY20 66 aa4.16□□□□□ -1.74
HOXB3-209ENST00000478644 IGHV3-30P01768 117 aa4.16□□□□□ -1.74
HOXB3-209ENST00000478644 IGHV3-33P01772 117 aa4.16□□□□□ -1.74
HOXB3-209ENST00000478644 TRGC1P0CF51 173 aa4.16□□□□□ -1.74
HOXB3-209ENST00000478644 IGHV3-30-3P0DP02 117 aa4.16□□□□□ -1.74
HOXB3-209ENST00000478644 IGHV3-30-5P0DP03 117 aa4.16□□□□□ -1.74
HOXB3-209ENST00000478644 NTF3P20783 257 aa4.16□□□□□ -1.74
HOXB3-209ENST00000478644 KRTAP10-1P60331 282 aa4.16□□□□□ -1.74
HOXB3-209ENST00000478644 DAZ4Q86SG3 579 aaKnown RBP4.16□□□□□ -1.74
HOXB3-209ENST00000478644 TSKUQ8WUA8 353 aa4.16□□□□□ -1.74
HOXB3-209ENST00000478644 GFRA4Q9GZZ7 299 aa4.16□□□□□ -1.74
HOXB3-209ENST00000478644 DAZ3Q9NR90 486 aaKnown RBP4.16□□□□□ -1.74
HOXB3-209ENST00000478644 HSPG2P98160 4391 aa4.16□□□□□ -1.74
HOXB3-209ENST00000478644 APOBP04114 4563 aaKnown RBP4.15□□□□□ -1.74
HOXB3-209ENST00000478644 A6NDN8 102 aa4.15□□□□□ -1.75
HOXB3-209ENST00000478644 E9PLD3 99 aa4.15□□□□□ -1.75
HOXB3-209ENST00000478644 H7C1H1 209 aa4.15□□□□□ -1.75
HOXB3-209ENST00000478644 CRPP02741 224 aa4.15□□□□□ -1.75
HOXB3-209ENST00000478644 RAB5AP20339 215 aa4.15□□□□□ -1.75
HOXB3-209ENST00000478644 RPL23P62829 140 aaKnown RBP4.15□□□□□ -1.75
HOXB3-209ENST00000478644 ZNF56Q15929 161 aa4.15□□□□□ -1.75
HOXB3-209ENST00000478644 MIAQ16674 131 aa4.15□□□□□ -1.75
HOXB3-209ENST00000478644 KIAA1644Q3SXP7 199 aa4.15□□□□□ -1.75
HOXB3-209ENST00000478644 PDZD11Q5EBL8 140 aa4.15□□□□□ -1.75
HOXB3-209ENST00000478644 NIT1Q86X76 327 aa4.15□□□□□ -1.75
HOXB3-209ENST00000478644 DNAJC30Q96LL9 226 aa4.15□□□□□ -1.75
HOXB3-209ENST00000478644 DPH3P1Q9H4G8 78 aa4.15□□□□□ -1.75
HOXB3-209ENST00000478644 SPANXB1Q9NS25 103 aaPredicted RBP4.15□□□□□ -1.75
HOXB3-209ENST00000478644 NAT8Q9UHE5 227 aa4.15□□□□□ -1.75
HOXB3-209ENST00000478644 A0A087WYN8 130 aa4.14□□□□□ -1.75
HOXB3-209ENST00000478644 SMKR1H3BMG3 65 aa4.14□□□□□ -1.75
HOXB3-209ENST00000478644 CLLU1Q5K131 121 aa4.14□□□□□ -1.75
HOXB3-209ENST00000478644 Q6ZSA8 131 aa4.14□□□□□ -1.75
HOXB3-209ENST00000478644 CBLN2Q8IUK8 224 aa4.14□□□□□ -1.75
HOXB3-209ENST00000478644 STPG4Q8N801 248 aa4.14□□□□□ -1.75
HOXB3-209ENST00000478644 PGLYRP4Q96LB8 373 aa4.14□□□□□ -1.75
HOXB3-209ENST00000478644 V9GYV3 84 aa4.14□□□□□ -1.75
HOXB3-209ENST00000478644 IGKV2D-24A0A075B6R9 120 aa4.13□□□□□ -1.75
HOXB3-209ENST00000478644 TRBV6-8A0A0A6YYG3 113 aa4.13□□□□□ -1.75
HOXB3-209ENST00000478644 TRAV8-4A0A0B4J246 113 aa4.13□□□□□ -1.75
HOXB3-209ENST00000478644 A0A1B0GUT8 65 aa4.13□□□□□ -1.75
HOXB3-209ENST00000478644 HIGD1CA8MV81 97 aa4.13□□□□□ -1.75
HOXB3-209ENST00000478644 TMEM262E9PQX1 116 aa4.13□□□□□ -1.75
HOXB3-209ENST00000478644 MGPP08493 103 aa4.13□□□□□ -1.75
HOXB3-209ENST00000478644 IFITM2Q01629 132 aa4.13□□□□□ -1.75
HOXB3-209ENST00000478644 RASL11AQ6T310 242 aa4.13□□□□□ -1.75
HOXB3-209ENST00000478644 SMIM15Q7Z3B0 74 aa4.13□□□□□ -1.75
HOXB3-209ENST00000478644 FAM19A1Q7Z5A9 133 aa4.13□□□□□ -1.75
HOXB3-209ENST00000478644 PACRGQ96M98 296 aaPredicted RBP4.13□□□□□ -1.75
HOXB3-209ENST00000478644 NIT2Q9NQR4 276 aa4.13□□□□□ -1.75
HOXB3-209ENST00000478644 TRBV25-1A0A075B6N4 114 aa4.12□□□□□ -1.75
HOXB3-209ENST00000478644 SMIM27A0A1W2PRY6 76 aa4.12□□□□□ -1.75
HOXB3-209ENST00000478644 SMR3BP02814 79 aaPredicted RBP4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms