RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 UBE2D4Q9Y2X8 147 aa11.94□□□□□ -0.5
TVP23B-202ENST00000476139 LEPROTO15243 131 aa11.93□□□□□ -0.5
TVP23B-202ENST00000476139 SCGB1C2P0DMR2 95 aa11.93□□□□□ -0.5
TVP23B-202ENST00000476139 MUSTN1Q8IVN3 82 aa11.93□□□□□ -0.5
TVP23B-202ENST00000476139 C10orf126Q8N4M7 172 aa11.93□□□□□ -0.5
TVP23B-202ENST00000476139 NPC2P61916 151 aa11.93□□□□□ -0.5
TVP23B-202ENST00000476139 NBEAL2Q6ZNJ1 2754 aa11.92□□□□□ -0.5
TVP23B-202ENST00000476139 EIF4EBP3O60516 100 aaPredicted RBP11.92□□□□□ -0.5
TVP23B-202ENST00000476139 TMEM263Q8WUH6 116 aaKnown RBP11.92□□□□□ -0.5
TVP23B-202ENST00000476139 TCL1BO95988 128 aa11.92□□□□□ -0.5
TVP23B-202ENST00000476139 TENM1Q9UKZ4 2725 aa11.92□□□□□ -0.5
TVP23B-202ENST00000476139 PRSS2P07478 247 aa11.91□□□□□ -0.5
TVP23B-202ENST00000476139 IGHV3-30-3P0DP02 117 aa11.91□□□□□ -0.5
TVP23B-202ENST00000476139 SMAGPQ0VAQ4 97 aa11.91□□□□□ -0.5
TVP23B-202ENST00000476139 DNAJC30Q96LL9 226 aa11.91□□□□□ -0.5
TVP23B-202ENST00000476139 NDUFA7O95182 113 aa11.91□□□□□ -0.5
TVP23B-202ENST00000476139 Q6ZUT4 128 aa11.91□□□□□ -0.5
TVP23B-202ENST00000476139 PRO1854Q9UHT4 67 aa11.91□□□□□ -0.5
TVP23B-202ENST00000476139 PLAC8L1A1L4L8 177 aa11.9□□□□□ -0.5
TVP23B-202ENST00000476139 MRPS36P82909 103 aaKnown RBP11.9□□□□□ -0.5
TVP23B-202ENST00000476139 GAGE12HA6NDE8 117 aa11.9□□□□□ -0.5
TVP23B-202ENST00000476139 SPINK8P0C7L1 97 aa11.9□□□□□ -0.5
TVP23B-202ENST00000476139 TIMM21Q9BVV7 248 aa11.9□□□□□ -0.5
TVP23B-202ENST00000476139 UBE2D3P61077 147 aa11.89□□□□□ -0.51
TVP23B-202ENST00000476139 UBE2D2P62837 147 aa11.89□□□□□ -0.51
TVP23B-202ENST00000476139 CSNK1G2-AS1Q8NCQ2 148 aa11.89□□□□□ -0.51
TVP23B-202ENST00000476139 A0A0J9YXY3 114 aa11.88□□□□□ -0.51
TVP23B-202ENST00000476139 NSD1Q96L73 2696 aaPredicted RBP11.88□□□□□ -0.51
TVP23B-202ENST00000476139 SPATA3Q8NHX4 192 aa11.88□□□□□ -0.51
TVP23B-202ENST00000476139 INAFM1C9JVW0 142 aa11.88□□□□□ -0.51
TVP23B-202ENST00000476139 GAGE7O76087 117 aa11.88□□□□□ -0.51
TVP23B-202ENST00000476139 GAGE12FP0CL80 117 aa11.88□□□□□ -0.51
TVP23B-202ENST00000476139 GAGE12GP0CL81 117 aa11.88□□□□□ -0.51
TVP23B-202ENST00000476139 GAGE12IP0CL82 117 aa11.88□□□□□ -0.51
TVP23B-202ENST00000476139 LINC00694P0DN24 101 aa11.88□□□□□ -0.51
TVP23B-202ENST00000476139 J3QR89 54 aa11.87□□□□□ -0.51
TVP23B-202ENST00000476139 SPANXA1Q9NS26 97 aa11.87□□□□□ -0.51
TVP23B-202ENST00000476139 CMC4P56277 68 aaPredicted RBP11.87□□□□□ -0.51
TVP23B-202ENST00000476139 ADAMTSL4-AS1Q5T5F5 129 aa11.87□□□□□ -0.51
TVP23B-202ENST00000476139 NTM-AS1Q6ZSK4 140 aa11.87□□□□□ -0.51
TVP23B-202ENST00000476139 HIVEP1P15822 2718 aa11.87□□□□□ -0.51
TVP23B-202ENST00000476139 GAGE12JA6NER3 117 aa11.86□□□□□ -0.51
TVP23B-202ENST00000476139 TMEM238C9JI98 176 aa11.86□□□□□ -0.51
TVP23B-202ENST00000476139 PF4P02776 101 aa11.86□□□□□ -0.51
TVP23B-202ENST00000476139 GAGE4Q13068 117 aa11.86□□□□□ -0.51
TVP23B-202ENST00000476139 GAGE5Q13069 117 aa11.86□□□□□ -0.51
TVP23B-202ENST00000476139 Q1RN00 199 aa11.86□□□□□ -0.51
TVP23B-202ENST00000476139 K7EQD1 137 aa11.86□□□□□ -0.51
TVP23B-202ENST00000476139 SIGMAR1Q99720 223 aa11.86□□□□□ -0.51
TVP23B-202ENST00000476139 TRGV2A0A075B6R0 118 aa11.85□□□□□ -0.51
TVP23B-202ENST00000476139 TRAV4A0A0B4J268 109 aa11.85□□□□□ -0.51
TVP23B-202ENST00000476139 DAZ2Q13117 558 aaKnown RBP11.85□□□□□ -0.51
TVP23B-202ENST00000476139 FAM110AQ9BQ89 295 aa11.85□□□□□ -0.51
TVP23B-202ENST00000476139 CRYBA4P53673 196 aa11.85□□□□□ -0.51
TVP23B-202ENST00000476139 DAND5Q8N907 189 aa11.85□□□□□ -0.51
TVP23B-202ENST00000476139 TRRAPQ9Y4A5 3859 aa11.85□□□□□ -0.51
TVP23B-202ENST00000476139 LOC100131303A0A0U1RQF7 123 aa11.85□□□□□ -0.51
TVP23B-202ENST00000476139 RPL36AP83881 106 aaKnown RBP11.85□□□□□ -0.51
TVP23B-202ENST00000476139 FOXI1Q12951 378 aa11.85□□□□□ -0.51
TVP23B-202ENST00000476139 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.85□□□□□ -0.51
TVP23B-202ENST00000476139 RPL36ALQ969Q0 106 aaKnown RBP11.85□□□□□ -0.51
TVP23B-202ENST00000476139 DGAT2L7PQ6IED9 249 aa11.84□□□□□ -0.51
TVP23B-202ENST00000476139 NDUFA12Q9UI09 145 aa11.84□□□□□ -0.51
TVP23B-202ENST00000476139 IGHV3-33P01772 117 aa11.84□□□□□ -0.51
TVP23B-202ENST00000476139 C16orf74Q96GX8 76 aa11.84□□□□□ -0.51
TVP23B-202ENST00000476139 ERG28Q9UKR5 140 aa11.84□□□□□ -0.51
TVP23B-202ENST00000476139 A0A0U1RRA0 63 aa11.83□□□□□ -0.52
TVP23B-202ENST00000476139 TINCRA0A1B0GVN0 87 aa11.83□□□□□ -0.52
TVP23B-202ENST00000476139 LINC00482Q8N8I6 264 aa11.83□□□□□ -0.52
TVP23B-202ENST00000476139 GEMIN7Q9H840 131 aaKnown RBP11.83□□□□□ -0.52
TVP23B-202ENST00000476139 C1QTNF4Q9BXJ3 329 aa11.83□□□□□ -0.52
TVP23B-202ENST00000476139 CDKN2A-AS1Q9UH64 79 aa11.83□□□□□ -0.52
TVP23B-202ENST00000476139 IGHV1-58A0A0C4DH39 117 aa11.82□□□□□ -0.52
TVP23B-202ENST00000476139 COX6A2Q02221 97 aa11.82□□□□□ -0.52
TVP23B-202ENST00000476139 ZNF625Q96I27 306 aaPredicted RBP11.82□□□□□ -0.52
TVP23B-202ENST00000476139 CARD19Q96LW7 228 aa11.82□□□□□ -0.52
TVP23B-202ENST00000476139 TRBV10-1A0A0K0K1A3 114 aa11.81□□□□□ -0.52
TVP23B-202ENST00000476139 LITAFQ99732 161 aa11.81□□□□□ -0.52
TVP23B-202ENST00000476139 C9JAW5 83 aa11.81□□□□□ -0.52
TVP23B-202ENST00000476139 VSIG2Q96IQ7 327 aa11.81□□□□□ -0.52
TVP23B-202ENST00000476139 ATRQ13535 2644 aa11.8□□□□□ -0.52
TVP23B-202ENST00000476139 LYRM7Q5U5X0 104 aa11.8□□□□□ -0.52
TVP23B-202ENST00000476139 DAZ4Q86SG3 579 aaKnown RBP11.8□□□□□ -0.52
TVP23B-202ENST00000476139 DAZ3Q9NR90 486 aaKnown RBP11.8□□□□□ -0.52
TVP23B-202ENST00000476139 OVOL2Q9BRP0 275 aa11.79□□□□□ -0.52
TVP23B-202ENST00000476139 TRBV20-1A0A075B6N2 111 aa11.78□□□□□ -0.52
TVP23B-202ENST00000476139 TRAV13-1A0A0B4J241 112 aa11.78□□□□□ -0.52
TVP23B-202ENST00000476139 ANKRD29Q8N6D5 301 aa11.78□□□□□ -0.52
TVP23B-202ENST00000476139 TRGV4A0A0C4DH28 118 aa11.78□□□□□ -0.52
TVP23B-202ENST00000476139 SPATA25Q9BR10 227 aa11.78□□□□□ -0.52
TVP23B-202ENST00000476139 DEFB130BP0DP73 79 aa11.77□□□□□ -0.52
TVP23B-202ENST00000476139 DEFB130AP0DP74 79 aa11.77□□□□□ -0.52
TVP23B-202ENST00000476139 LINC00242Q5T6M2 205 aa11.77□□□□□ -0.52
TVP23B-202ENST00000476139 CRLF1O75462 422 aa11.76□□□□□ -0.53
TVP23B-202ENST00000476139 TEN1Q86WV5 123 aa11.76□□□□□ -0.53
TVP23B-202ENST00000476139 A0A0B4J2C4 111 aa11.76□□□□□ -0.53
TVP23B-202ENST00000476139 SLC25A20O43772 301 aa11.76□□□□□ -0.53
TVP23B-202ENST00000476139 SBSPONQ8IVN8 264 aa11.76□□□□□ -0.53
TVP23B-202ENST00000476139 TMEM101Q96IK0 257 aa11.76□□□□□ -0.53
TVP23B-202ENST00000476139 FHL2Q14192 279 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms